RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 MAP2P11137 1827 aaKnown RBP25.19■■□□□ 1.62
SYNGAP1-227ENST00000638142 DDX11L8A8MPP1 907 aa25.19■■□□□ 1.62
SYNGAP1-227ENST00000638142 CDK12Q9NYV4 1490 aaPredicted RBP25.18■■□□□ 1.62
SYNGAP1-227ENST00000638142 TRAK2O60296 914 aa25.18■■□□□ 1.62
SYNGAP1-227ENST00000638142 EDC4Q6P2E9 1401 aaKnown RBP25.17■■□□□ 1.62
SYNGAP1-227ENST00000638142 ZNF853P0CG23 659 aa25.17■■□□□ 1.62
SYNGAP1-227ENST00000638142 ABCC4O15439 1325 aa25.17■■□□□ 1.62
SYNGAP1-227ENST00000638142 REREQ9P2R6 1566 aa25.16■■□□□ 1.62
SYNGAP1-227ENST00000638142 HMOX1P09601 288 aa25.16■■□□□ 1.62
SYNGAP1-227ENST00000638142 ANKRD45Q5TZF3 282 aa25.16■■□□□ 1.62
SYNGAP1-227ENST00000638142 CIZ1Q9ULV3 898 aaPredicted RBP25.16■■□□□ 1.62
SYNGAP1-227ENST00000638142 IL13P35225 146 aa25.15■■□□□ 1.62
SYNGAP1-227ENST00000638142 CPSF1Q10570 1443 aaKnown RBP25.15■■□□□ 1.62
SYNGAP1-227ENST00000638142 FBLN1P23142 703 aa25.15■■□□□ 1.62
SYNGAP1-227ENST00000638142 AATKQ6ZMQ8 1374 aa25.15■■□□□ 1.62
SYNGAP1-227ENST00000638142 LMOD3Q0VAK6 560 aa25.14■■□□□ 1.62
SYNGAP1-227ENST00000638142 SETD1AO15047 1707 aaKnown RBP25.14■■□□□ 1.62
SYNGAP1-227ENST00000638142 XRCC6P12956 609 aaKnown RBP eCLIP25.14■■□□□ 1.61
SYNGAP1-227ENST00000638142 TSPYL6Q8N831 410 aa25.14■■□□□ 1.61
SYNGAP1-227ENST00000638142 THUMPD2Q9BTF0 503 aaKnown RBP25.14■■□□□ 1.61
SYNGAP1-227ENST00000638142 WAPLQ7Z5K2 1190 aa25.13■■□□□ 1.61
SYNGAP1-227ENST00000638142 MBIPQ9NS73 344 aa25.13■■□□□ 1.61
SYNGAP1-227ENST00000638142 EIF5BO60841 1220 aaKnown RBP25.13■■□□□ 1.61
SYNGAP1-227ENST00000638142 A2ML1A8K2U0 1454 aa25.13■■□□□ 1.61
SYNGAP1-227ENST00000638142 RRAGDQ9NQL2 400 aaPredicted RBP25.12■■□□□ 1.61
SYNGAP1-227ENST00000638142 EMILIN1Q9Y6C2 1016 aa25.12■■□□□ 1.61
SYNGAP1-227ENST00000638142 PPP6R1Q9UPN7 881 aa25.11■■□□□ 1.61
SYNGAP1-227ENST00000638142 TWISTNBQ3B726 338 aaPredicted RBP25.11■■□□□ 1.61
SYNGAP1-227ENST00000638142 CFAP44Q96MT7 982 aa25.11■■□□□ 1.61
SYNGAP1-227ENST00000638142 API5Q9BZZ5 524 aaKnown RBP25.11■■□□□ 1.61
SYNGAP1-227ENST00000638142 GZF1Q9H116 711 aaPredicted RBP25.11■■□□□ 1.61
SYNGAP1-227ENST00000638142 HSP90AB1P08238 724 aaKnown RBP25.1■■□□□ 1.61
SYNGAP1-227ENST00000638142 C1orf115Q9H7X2 142 aa25.1■■□□□ 1.61
SYNGAP1-227ENST00000638142 RIMS2Q9UQ26 1411 aa25.1■■□□□ 1.61
SYNGAP1-227ENST00000638142 KIF24Q5T7B8 1368 aa25.1■■□□□ 1.61
SYNGAP1-227ENST00000638142 SIRT2Q8IXJ6 389 aa25.09■■□□□ 1.61
SYNGAP1-227ENST00000638142 KIF2CQ99661 725 aa25.09■■□□□ 1.61
SYNGAP1-227ENST00000638142 ISY1Q9ULR0 285 aaKnown RBP25.09■■□□□ 1.61
SYNGAP1-227ENST00000638142 TBC1D9Q6ZT07 1266 aa25.08■■□□□ 1.61
SYNGAP1-227ENST00000638142 WASLO00401 505 aaPredicted RBP25.08■■□□□ 1.61
SYNGAP1-227ENST00000638142 SPATA31D1Q6ZQQ2 1576 aa25.08■■□□□ 1.6
SYNGAP1-227ENST00000638142 MRE11P49959 708 aa25.07■■□□□ 1.6
SYNGAP1-227ENST00000638142 NME9Q86XW9 330 aa25.07■■□□□ 1.6
SYNGAP1-227ENST00000638142 AGLP35573 1532 aa25.07■■□□□ 1.6
SYNGAP1-227ENST00000638142 DLG5Q8TDM6 1919 aa25.06■■□□□ 1.6
SYNGAP1-227ENST00000638142 ELL2O00472 640 aaPredicted RBP25.06■■□□□ 1.6
SYNGAP1-227ENST00000638142 UBE2Q2Q8WVN8 375 aa25.06■■□□□ 1.6
SYNGAP1-227ENST00000638142 GBP4Q96PP9 640 aa25.06■■□□□ 1.6
SYNGAP1-227ENST00000638142 RAB3GAP1Q15042 981 aa25.05■■□□□ 1.6
SYNGAP1-227ENST00000638142 TNPO1Q92973 898 aaKnown RBP25.05■■□□□ 1.6
SYNGAP1-227ENST00000638142 PTMSP20962 102 aa25.04■■□□□ 1.6
SYNGAP1-227ENST00000638142 C8orf58Q8NAV2 365 aa25.04■■□□□ 1.6
SYNGAP1-227ENST00000638142 COG3Q96JB2 828 aa25.04■■□□□ 1.6
SYNGAP1-227ENST00000638142 CDC45O75419 566 aa25.04■■□□□ 1.6
SYNGAP1-227ENST00000638142 MON2Q7Z3U7 1717 aa25.03■■□□□ 1.6
SYNGAP1-227ENST00000638142 ARXQ96QS3 562 aa25.03■■□□□ 1.6
SYNGAP1-227ENST00000638142 K7ELQ4 463 aaPredicted RBP25.03■■□□□ 1.6
SYNGAP1-227ENST00000638142 PANK2Q9BZ23 570 aa25.01■■□□□ 1.59
SYNGAP1-227ENST00000638142 NRXN3Q9Y4C0 1643 aa25■■□□□ 1.59
SYNGAP1-227ENST00000638142 HSP90AA1P07900 732 aaKnown RBP25■■□□□ 1.59
SYNGAP1-227ENST00000638142 SKOR2Q2VWA4 1001 aaPredicted RBP25■■□□□ 1.59
SYNGAP1-227ENST00000638142 ZRANB1Q9UGI0 708 aa25■■□□□ 1.59
SYNGAP1-227ENST00000638142 NUDT16Q96DE0 195 aaKnown RBP25■■□□□ 1.59
SYNGAP1-227ENST00000638142 CPS1P31327 1500 aa24.99■■□□□ 1.59
SYNGAP1-227ENST00000638142 HAP1P54257 671 aaPredicted RBP24.99■■□□□ 1.59
SYNGAP1-227ENST00000638142 DCTPP1Q9H773 170 aa24.98■■□□□ 1.59
SYNGAP1-227ENST00000638142 GRPEL1Q9HAV7 217 aa24.98■■□□□ 1.59
SYNGAP1-227ENST00000638142 CCDC61Q9Y6R9 512 aa24.98■■□□□ 1.59
SYNGAP1-227ENST00000638142 KNDC1Q76NI1 1749 aa24.98■■□□□ 1.59
SYNGAP1-227ENST00000638142 CD2BP2O95400 341 aaKnown RBP24.98■■□□□ 1.59
SYNGAP1-227ENST00000638142 C3P01024 1663 aa24.98■■□□□ 1.59
SYNGAP1-227ENST00000638142 INTS3Q68E01 1043 aaKnown RBP24.97■■□□□ 1.59
SYNGAP1-227ENST00000638142 NRKQ7Z2Y5 1582 aa24.97■■□□□ 1.59
SYNGAP1-227ENST00000638142 FAM83GA6ND36 823 aa24.97■■□□□ 1.59
SYNGAP1-227ENST00000638142 RRS1Q15050 365 aaKnown RBP24.97■■□□□ 1.59
SYNGAP1-227ENST00000638142 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.97■■□□□ 1.59
SYNGAP1-227ENST00000638142 SIRT1Q96EB6 747 aa24.97■■□□□ 1.59
SYNGAP1-227ENST00000638142 AKAP12Q02952 1782 aa24.97■■□□□ 1.59
SYNGAP1-227ENST00000638142 TRHP20396 242 aaPredicted RBP24.96■■□□□ 1.59
SYNGAP1-227ENST00000638142 PLEKHM2Q8IWE5 1019 aa24.96■■□□□ 1.59
SYNGAP1-227ENST00000638142 METP08581 1390 aa24.96■■□□□ 1.59
SYNGAP1-227ENST00000638142 GSPT1P15170 499 aaKnown RBP24.96■■□□□ 1.59
SYNGAP1-227ENST00000638142 CLCN1P35523 988 aa24.96■■□□□ 1.59
SYNGAP1-227ENST00000638142 TECPR2O15040 1411 aa24.95■■□□□ 1.59
SYNGAP1-227ENST00000638142 ITSN1Q15811 1721 aa24.94■■□□□ 1.58
SYNGAP1-227ENST00000638142 DCTN1Q14203 1278 aa24.93■■□□□ 1.58
SYNGAP1-227ENST00000638142 TTC22Q5TAA0 569 aa24.93■■□□□ 1.58
SYNGAP1-227ENST00000638142 ANKRD44Q8N8A2 993 aa24.93■■□□□ 1.58
SYNGAP1-227ENST00000638142 RBM42Q9BTD8 480 aaKnown RBP24.93■■□□□ 1.58
SYNGAP1-227ENST00000638142 CLEC17AQ6ZS10 378 aa24.92■■□□□ 1.58
SYNGAP1-227ENST00000638142 TXNDC2Q86VQ3 553 aa24.92■■□□□ 1.58
SYNGAP1-227ENST00000638142 ATP10DQ9P241 1426 aa24.92■■□□□ 1.58
SYNGAP1-227ENST00000638142 RABEP1Q15276 862 aa24.92■■□□□ 1.58
SYNGAP1-227ENST00000638142 RPAP2Q8IXW5 612 aaPredicted RBP24.92■■□□□ 1.58
SYNGAP1-227ENST00000638142 RGS12O14924 1447 aa24.91■■□□□ 1.58
SYNGAP1-227ENST00000638142 GAS2L2Q8NHY3 880 aa24.91■■□□□ 1.58
SYNGAP1-227ENST00000638142 KIAA0232Q92628 1395 aa24.91■■□□□ 1.58
SYNGAP1-227ENST00000638142 FOXD4L1Q9NU39 408 aa24.89■■□□□ 1.58
SYNGAP1-227ENST00000638142 NCKAP5LQ9HCH0 1330 aa24.89■■□□□ 1.57
SYNGAP1-227ENST00000638142 GOLGA6L22H0YM25 854 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms