RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 NEFMP07197 916 aa10.19□□□□□ -0.78
GABRB3-225ENST00000638099 XPCQ01831 940 aaPredicted RBP10.19□□□□□ -0.78
GABRB3-225ENST00000638099 SSH1Q8WYL5 1049 aa10.19□□□□□ -0.78
GABRB3-225ENST00000638099 ANKLE2Q86XL3 938 aa10.18□□□□□ -0.78
GABRB3-225ENST00000638099 KDM2BQ8NHM5 1336 aa10.18□□□□□ -0.78
GABRB3-225ENST00000638099 NLRP6P59044 892 aa10.18□□□□□ -0.78
GABRB3-225ENST00000638099 LTV1Q96GA3 475 aaPredicted RBP10.18□□□□□ -0.78
GABRB3-225ENST00000638099 DIP2AQ14689 1571 aa10.17□□□□□ -0.78
GABRB3-225ENST00000638099 NFE2L2Q16236 605 aa10.17□□□□□ -0.78
GABRB3-225ENST00000638099 TSPYL6Q8N831 410 aa10.17□□□□□ -0.78
GABRB3-225ENST00000638099 SETD1BQ9UPS6 1966 aaKnown RBP10.16□□□□□ -0.78
GABRB3-225ENST00000638099 PDE4AP27815 886 aa10.16□□□□□ -0.78
GABRB3-225ENST00000638099 MAP3K19Q56UN5 1328 aa10.16□□□□□ -0.78
GABRB3-225ENST00000638099 FOXO3O43524 673 aa10.16□□□□□ -0.78
GABRB3-225ENST00000638099 MCM10Q7L590 875 aa10.16□□□□□ -0.78
GABRB3-225ENST00000638099 NOB1Q9ULX3 412 aaKnown RBP10.16□□□□□ -0.78
GABRB3-225ENST00000638099 PCDHB15Q9Y5E8 787 aa10.16□□□□□ -0.78
GABRB3-225ENST00000638099 KRT24Q2M2I5 525 aa10.15□□□□□ -0.78
GABRB3-225ENST00000638099 FTSJ3Q8IY81 847 aaKnown RBP10.15□□□□□ -0.78
GABRB3-225ENST00000638099 ABTB2Q8N961 1025 aa10.15□□□□□ -0.78
GABRB3-225ENST00000638099 MIS18AQ9NYP9 233 aa10.15□□□□□ -0.78
GABRB3-225ENST00000638099 TOPAZ1Q8N9V7 1692 aa10.15□□□□□ -0.78
GABRB3-225ENST00000638099 CDK12Q9NYV4 1490 aaPredicted RBP10.15□□□□□ -0.79
GABRB3-225ENST00000638099 EIF5BO60841 1220 aaKnown RBP10.14□□□□□ -0.79
GABRB3-225ENST00000638099 AMPHP49418 695 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 PDE3AQ14432 1141 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 ESCO1Q5FWF5 840 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 CENPQQ7L2Z9 268 aaPredicted RBP10.14□□□□□ -0.79
GABRB3-225ENST00000638099 AATKQ6ZMQ8 1374 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 PEAK1Q9H792 1746 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 OVOS2A0A0J9YW53 1432 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 OVOS2Q6IE36 1432 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 TRIM27P14373 513 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 LMOD2Q6P5Q4 547 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 PNNQ9H307 717 aaKnown RBP10.14□□□□□ -0.79
GABRB3-225ENST00000638099 MBIPQ9NS73 344 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 NRKQ7Z2Y5 1582 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 PTCH1Q13635 1447 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 DLG5Q8TDM6 1919 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 TULP1O00294 542 aaPredicted RBP10.14□□□□□ -0.79
GABRB3-225ENST00000638099 ZKSCAN2Q63HK3 967 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 ITPRIPQ8IWB1 547 aa10.14□□□□□ -0.79
GABRB3-225ENST00000638099 USHBP1Q8N6Y0 703 aa10.13□□□□□ -0.79
GABRB3-225ENST00000638099 XRN1Q8IZH2 1706 aaKnown RBP10.13□□□□□ -0.79
GABRB3-225ENST00000638099 DZIP1LQ8IYY4 767 aaKnown RBP10.13□□□□□ -0.79
GABRB3-225ENST00000638099 C8orf58Q8NAV2 365 aa10.13□□□□□ -0.79
GABRB3-225ENST00000638099 ORAI2Q96SN7 254 aa10.13□□□□□ -0.79
GABRB3-225ENST00000638099 TAOK2Q9UL54 1235 aa10.13□□□□□ -0.79
GABRB3-225ENST00000638099 TMEM57Q8N5G2 664 aa10.12□□□□□ -0.79
GABRB3-225ENST00000638099 BACH2Q9BYV9 841 aa10.12□□□□□ -0.79
GABRB3-225ENST00000638099 PHF8Q9UPP1 1060 aa10.12□□□□□ -0.79
GABRB3-225ENST00000638099 SSH2Q76I76 1423 aa10.12□□□□□ -0.79
GABRB3-225ENST00000638099 HSPA2P54652 639 aa10.11□□□□□ -0.79
GABRB3-225ENST00000638099 PIK3C2AO00443 1686 aa10.1□□□□□ -0.79
GABRB3-225ENST00000638099 MVPQ14764 893 aaKnown RBP10.1□□□□□ -0.79
GABRB3-225ENST00000638099 DDX17Q92841 729 aaKnown RBP10.1□□□□□ -0.79
GABRB3-225ENST00000638099 EYA1Q99502 592 aa10.1□□□□□ -0.79
GABRB3-225ENST00000638099 NALCNQ8IZF0 1738 aa10.1□□□□□ -0.79
GABRB3-225ENST00000638099 ADAMTSL3P82987 1691 aa10.1□□□□□ -0.79
GABRB3-225ENST00000638099 VAMP4O75379 141 aa10.1□□□□□ -0.79
GABRB3-225ENST00000638099 PSME1Q06323 249 aa10.1□□□□□ -0.79
GABRB3-225ENST00000638099 C1orf115Q9H7X2 142 aa10.1□□□□□ -0.79
GABRB3-225ENST00000638099 IL16Q14005 1332 aa10.1□□□□□ -0.79
GABRB3-225ENST00000638099 MTHFSDQ2M296 383 aaKnown RBP10.09□□□□□ -0.79
GABRB3-225ENST00000638099 ATF7IPQ6VMQ6 1270 aa10.09□□□□□ -0.79
GABRB3-225ENST00000638099 SOCS7O14512 581 aa10.09□□□□□ -0.79
GABRB3-225ENST00000638099 ANP32AP39687 249 aaKnown RBP10.09□□□□□ -0.79
GABRB3-225ENST00000638099 TWISTNBQ3B726 338 aaPredicted RBP10.09□□□□□ -0.79
GABRB3-225ENST00000638099 TTC21AQ8NDW8 1320 aa10.09□□□□□ -0.79
GABRB3-225ENST00000638099 CHD2O14647 1828 aaKnown RBP10.09□□□□□ -0.79
GABRB3-225ENST00000638099 GNAI1P63096 354 aa10.09□□□□□ -0.79
GABRB3-225ENST00000638099 USP31Q70CQ4 1352 aa10.08□□□□□ -0.8
GABRB3-225ENST00000638099 PROSER2Q86WR7 435 aaPredicted RBP10.08□□□□□ -0.8
GABRB3-225ENST00000638099 HOMEZQ8IX15 550 aa10.08□□□□□ -0.8
GABRB3-225ENST00000638099 ANP32EQ9BTT0 268 aa10.08□□□□□ -0.8
GABRB3-225ENST00000638099 NPHP4O75161 1426 aaPredicted RBP10.08□□□□□ -0.8
GABRB3-225ENST00000638099 HOXC9P31274 260 aa10.08□□□□□ -0.8
GABRB3-225ENST00000638099 CFAP44Q96MT7 982 aa10.08□□□□□ -0.8
GABRB3-225ENST00000638099 FMN2Q9NZ56 1722 aa10.08□□□□□ -0.8
GABRB3-225ENST00000638099 ZNF853P0CG23 659 aa10.07□□□□□ -0.8
GABRB3-225ENST00000638099 IFT57Q9NWB7 429 aa10.07□□□□□ -0.8
GABRB3-225ENST00000638099 FLT4P35916 1363 aa10.07□□□□□ -0.8
GABRB3-225ENST00000638099 MS4A1P11836 297 aa10.07□□□□□ -0.8
GABRB3-225ENST00000638099 C8orf34Q49A92 452 aa10.07□□□□□ -0.8
GABRB3-225ENST00000638099 NECTIN2Q92692 538 aa10.07□□□□□ -0.8
GABRB3-225ENST00000638099 SBNO1A3KN83 1393 aa10.06□□□□□ -0.8
GABRB3-225ENST00000638099 MRPL50Q8N5N7 158 aaKnown RBP10.06□□□□□ -0.8
GABRB3-225ENST00000638099 LRRC59Q96AG4 307 aaKnown RBP10.06□□□□□ -0.8
GABRB3-225ENST00000638099 PDZRN3Q9UPQ7 1066 aa10.06□□□□□ -0.8
GABRB3-225ENST00000638099 SLC4A3P48751 1232 aa10.06□□□□□ -0.8
GABRB3-225ENST00000638099 LMTK3Q96Q04 1460 aa10.06□□□□□ -0.8
GABRB3-225ENST00000638099 CT47B1P0C2W7 299 aaPredicted RBP10.05□□□□□ -0.8
GABRB3-225ENST00000638099 PIK3R4Q99570 1358 aa10.05□□□□□ -0.8
GABRB3-225ENST00000638099 LMOD3Q0VAK6 560 aa10.05□□□□□ -0.8
GABRB3-225ENST00000638099 ZNF142P52746 1687 aaPredicted RBP10.04□□□□□ -0.8
GABRB3-225ENST00000638099 SEC24BO95487 1268 aa10.04□□□□□ -0.8
GABRB3-225ENST00000638099 IPO9Q96P70 1041 aaKnown RBP10.04□□□□□ -0.8
GABRB3-225ENST00000638099 NOP58Q9Y2X3 529 aaKnown RBP10.04□□□□□ -0.8
GABRB3-225ENST00000638099 KIF16BQ96L93 1317 aa10.04□□□□□ -0.8
GABRB3-225ENST00000638099 CALD1Q05682 793 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms