RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 DNAJC21Q5F1R6 531 aaKnown RBP17.71■□□□□ 0.43
UBE3A-227ENST00000638011 CARMIL2Q6F5E8 1435 aa17.71■□□□□ 0.43
UBE3A-227ENST00000638011 K7ELQ4 463 aaPredicted RBP17.71■□□□□ 0.43
UBE3A-227ENST00000638011 PAK3O75914 559 aaPredicted RBP17.7■□□□□ 0.42
UBE3A-227ENST00000638011 IFFO1Q0D2I5 559 aa17.7■□□□□ 0.42
UBE3A-227ENST00000638011 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
UBE3A-227ENST00000638011 IPO4Q8TEX9 1081 aaKnown RBP17.7■□□□□ 0.42
UBE3A-227ENST00000638011 GCC1Q96CN9 775 aa17.7■□□□□ 0.42
UBE3A-227ENST00000638011 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
UBE3A-227ENST00000638011 MAP3K11Q16584 847 aa17.7■□□□□ 0.42
UBE3A-227ENST00000638011 SMARCC1Q92922 1105 aaPredicted RBP17.7■□□□□ 0.42
UBE3A-227ENST00000638011 MIA2Q96PC5 1412 aa17.7■□□□□ 0.42
UBE3A-227ENST00000638011 CTAGE5O15320 804 aa17.7■□□□□ 0.42
UBE3A-227ENST00000638011 NSRP1Q9H0G5 558 aaKnown RBP17.7■□□□□ 0.42
UBE3A-227ENST00000638011 SRCIN1Q9C0H9 1055 aa17.7■□□□□ 0.42
UBE3A-227ENST00000638011 SREK1Q8WXA9 508 aaKnown RBP17.69■□□□□ 0.42
UBE3A-227ENST00000638011 ME1P48163 572 aa17.69■□□□□ 0.42
UBE3A-227ENST00000638011 NUP62CLQ9H1M0 184 aa17.69■□□□□ 0.42
UBE3A-227ENST00000638011 FIBPO43427 364 aa17.69■□□□□ 0.42
UBE3A-227ENST00000638011 DDX23Q9BUQ8 820 aaKnown RBP17.69■□□□□ 0.42
UBE3A-227ENST00000638011 PLEKHH2Q8IVE3 1493 aa17.69■□□□□ 0.42
UBE3A-227ENST00000638011 RRBP1Q9P2E9 1410 aaKnown RBP17.69■□□□□ 0.42
UBE3A-227ENST00000638011 SPA17Q15506 151 aa17.68■□□□□ 0.42
UBE3A-227ENST00000638011 GNAI1P63096 354 aa17.68■□□□□ 0.42
UBE3A-227ENST00000638011 FGFR1OPO95684 399 aaKnown RBP17.68■□□□□ 0.42
UBE3A-227ENST00000638011 BRPF1P55201 1214 aaPredicted RBP17.68■□□□□ 0.42
UBE3A-227ENST00000638011 TUBBP07437 444 aa17.68■□□□□ 0.42
UBE3A-227ENST00000638011 TEFQ10587 303 aa17.68■□□□□ 0.42
UBE3A-227ENST00000638011 FMNL2Q96PY5 1086 aa17.68■□□□□ 0.42
UBE3A-227ENST00000638011 A6NNZ2 444 aa17.67■□□□□ 0.42
UBE3A-227ENST00000638011 TUBB8Q3ZCM7 444 aa17.67■□□□□ 0.42
UBE3A-227ENST00000638011 STMN4Q9H169 189 aaPredicted RBP17.67■□□□□ 0.42
UBE3A-227ENST00000638011 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
UBE3A-227ENST00000638011 A0A1B0GUA9 196 aa17.67■□□□□ 0.42
UBE3A-227ENST00000638011 RUNDC1Q96C34 613 aa17.67■□□□□ 0.42
UBE3A-227ENST00000638011 BCCIPQ9P287 314 aaKnown RBP eCLIP17.67■□□□□ 0.42
UBE3A-227ENST00000638011 NEK4P51957 841 aa17.67■□□□□ 0.42
UBE3A-227ENST00000638011 PDE3AQ14432 1141 aa17.67■□□□□ 0.42
UBE3A-227ENST00000638011 PAF1Q8N7H5 531 aa17.67■□□□□ 0.42
UBE3A-227ENST00000638011 WASHC2AQ641Q2 1341 aa17.67■□□□□ 0.42
UBE3A-227ENST00000638011 TDO2P48775 406 aa17.66■□□□□ 0.42
UBE3A-227ENST00000638011 BMP2KQ9NSY1 1161 aaPredicted RBP17.66■□□□□ 0.42
UBE3A-227ENST00000638011 USH1CQ9Y6N9 552 aa17.66■□□□□ 0.42
UBE3A-227ENST00000638011 STAC3Q96MF2 364 aa17.66■□□□□ 0.42
UBE3A-227ENST00000638011 TTC5Q8N0Z6 440 aa17.66■□□□□ 0.42
UBE3A-227ENST00000638011 CEP131Q9UPN4 1083 aa17.66■□□□□ 0.42
UBE3A-227ENST00000638011 PAFAH1B1P43034 410 aa17.66■□□□□ 0.42
UBE3A-227ENST00000638011 SH2D4BQ5SQS7 431 aa17.66■□□□□ 0.42
UBE3A-227ENST00000638011 ZFYP08048 801 aaPredicted RBP17.66■□□□□ 0.42
UBE3A-227ENST00000638011 HOOK3Q86VS8 718 aa17.66■□□□□ 0.42
UBE3A-227ENST00000638011 CEP83Q9Y592 693 aa17.66■□□□□ 0.42
UBE3A-227ENST00000638011 RSRC1Q96IZ7 334 aaKnown RBP17.66■□□□□ 0.42
UBE3A-227ENST00000638011 CEP112Q8N8E3 955 aa17.65■□□□□ 0.42
UBE3A-227ENST00000638011 CYP46A1Q9Y6A2 500 aa17.65■□□□□ 0.42
UBE3A-227ENST00000638011 MCM4P33991 863 aa17.65■□□□□ 0.42
UBE3A-227ENST00000638011 CCDC183Q5T5S1 534 aa17.65■□□□□ 0.42
UBE3A-227ENST00000638011 ZMYND15Q9H091 742 aa17.65■□□□□ 0.42
UBE3A-227ENST00000638011 KRT18P05783 430 aaKnown RBP17.65■□□□□ 0.42
UBE3A-227ENST00000638011 SENP3Q9H4L4 574 aaPredicted RBP17.65■□□□□ 0.42
UBE3A-227ENST00000638011 MYO10Q9HD67 2058 aa17.64■□□□□ 0.41
UBE3A-227ENST00000638011 CLGNO14967 610 aa17.64■□□□□ 0.41
UBE3A-227ENST00000638011 RNF187Q5TA31 235 aaPredicted RBP17.64■□□□□ 0.41
UBE3A-227ENST00000638011 ALS2CR12Q96Q35 445 aa17.64■□□□□ 0.41
UBE3A-227ENST00000638011 TBC1D2BQ9UPU7 963 aa17.64■□□□□ 0.41
UBE3A-227ENST00000638011 KRT32Q14532 448 aa17.64■□□□□ 0.41
UBE3A-227ENST00000638011 WASF1Q92558 559 aa17.64■□□□□ 0.41
UBE3A-227ENST00000638011 PPP6R1Q9UPN7 881 aa17.64■□□□□ 0.41
UBE3A-227ENST00000638011 GRIPAP1Q4V328 841 aa17.63■□□□□ 0.41
UBE3A-227ENST00000638011 TTC14Q96N46 770 aa17.63■□□□□ 0.41
UBE3A-227ENST00000638011 USO1O60763 962 aaKnown RBP17.63■□□□□ 0.41
UBE3A-227ENST00000638011 GNAI3P08754 354 aa17.63■□□□□ 0.41
UBE3A-227ENST00000638011 ZSCAN31Q96LW9 406 aaPredicted RBP17.63■□□□□ 0.41
UBE3A-227ENST00000638011 ARFGAP3Q9NP61 516 aa17.63■□□□□ 0.41
UBE3A-227ENST00000638011 NOL7Q9UMY1 257 aaKnown RBP17.63■□□□□ 0.41
UBE3A-227ENST00000638011 CBX1P83916 185 aa17.63■□□□□ 0.41
UBE3A-227ENST00000638011 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
UBE3A-227ENST00000638011 SPATA32Q96LK8 384 aa17.63■□□□□ 0.41
UBE3A-227ENST00000638011 NOL3O60936 208 aaKnown RBP17.63■□□□□ 0.41
UBE3A-227ENST00000638011 COG3Q96JB2 828 aa17.62■□□□□ 0.41
UBE3A-227ENST00000638011 PLIN1O60240 522 aa17.62■□□□□ 0.41
UBE3A-227ENST00000638011 ANAPC15P60006 121 aa17.62■□□□□ 0.41
UBE3A-227ENST00000638011 CCDC6Q16204 474 aa17.62■□□□□ 0.41
UBE3A-227ENST00000638011 SRRTQ9BXP5 876 aaKnown RBP17.62■□□□□ 0.41
UBE3A-227ENST00000638011 LNPKQ9C0E8 428 aa17.62■□□□□ 0.41
UBE3A-227ENST00000638011 LIG1P18858 919 aa17.62■□□□□ 0.41
UBE3A-227ENST00000638011 PPP4R3BQ5MIZ7 849 aa17.62■□□□□ 0.41
UBE3A-227ENST00000638011 SCAND2PQ9GZW5 306 aaPredicted RBP17.62■□□□□ 0.41
UBE3A-227ENST00000638011 CCDC171Q6TFL3 1326 aa17.61■□□□□ 0.41
UBE3A-227ENST00000638011 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
UBE3A-227ENST00000638011 MSL1Q68DK7 614 aa17.61■□□□□ 0.41
UBE3A-227ENST00000638011 CCDC50Q8IVM0 306 aa17.61■□□□□ 0.41
UBE3A-227ENST00000638011 BACH2Q9BYV9 841 aa17.61■□□□□ 0.41
UBE3A-227ENST00000638011 CCDC9Q9Y3X0 531 aaKnown RBP17.61■□□□□ 0.41
UBE3A-227ENST00000638011 FSD2A1L4K1 749 aa17.61■□□□□ 0.41
UBE3A-227ENST00000638011 SAFB2Q14151 953 aaKnown RBP eCLIP17.61■□□□□ 0.412e-6■■■□□ 15.5
UBE3A-227ENST00000638011 SARNPP82979 210 aaKnown RBP17.61■□□□□ 0.41
UBE3A-227ENST00000638011 TTC31Q49AM3 519 aaPredicted RBP17.61■□□□□ 0.41
UBE3A-227ENST00000638011 FAM177A1Q8N128 213 aaPredicted RBP17.61■□□□□ 0.41
UBE3A-227ENST00000638011 CFAP100Q494V2 611 aa17.61■□□□□ 0.41
UBE3A-227ENST00000638011 ANO10Q9NW15 660 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms