RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 PIK3C2AO00443 1686 aa21.31■■□□□ 1
CTSD-213ENST00000637915 PDE4AP27815 886 aa21.3■■□□□ 1
CTSD-213ENST00000637915 EIF4A2Q14240 407 aaKnown RBP21.3■■□□□ 1
CTSD-213ENST00000637915 RGPD1P0DJD0 1748 aa21.29■■□□□ 1
CTSD-213ENST00000637915 SMC4Q9NTJ3 1288 aa21.29■■□□□ 1
CTSD-213ENST00000637915 AAMPQ13685 434 aa21.28■■□□□ 1
CTSD-213ENST00000637915 ZKSCAN2Q63HK3 967 aa21.28■■□□□ 1
CTSD-213ENST00000637915 SSH1Q8WYL5 1049 aa21.28■■□□□ 1
CTSD-213ENST00000637915 BACH2Q9BYV9 841 aa21.28■■□□□ 1
CTSD-213ENST00000637915 SETD1BQ9UPS6 1966 aaKnown RBP21.28■■□□□ 1
CTSD-213ENST00000637915 IGHDP01880 384 aa21.27■■□□□ 1
CTSD-213ENST00000637915 MYT1Q01538 1121 aa21.27■■□□□ 1
CTSD-213ENST00000637915 CALD1Q05682 793 aaKnown RBP21.27■■□□□ 1
CTSD-213ENST00000637915 THUMPD2Q9BTF0 503 aaKnown RBP21.27■□□□□ 0.99
CTSD-213ENST00000637915 HSP90AB2PQ58FF8 381 aa21.26■□□□□ 0.99
CTSD-213ENST00000637915 SOX12O15370 315 aa21.25■□□□□ 0.99
CTSD-213ENST00000637915 AEBP1Q8IUX7 1158 aa21.25■□□□□ 0.99
CTSD-213ENST00000637915 LMOD3Q0VAK6 560 aa21.24■□□□□ 0.99
CTSD-213ENST00000637915 MVPQ14764 893 aaKnown RBP21.24■□□□□ 0.99
CTSD-213ENST00000637915 DZIP1LQ8IYY4 767 aaKnown RBP21.24■□□□□ 0.99
CTSD-213ENST00000637915 IFT57Q9NWB7 429 aa21.24■□□□□ 0.99
CTSD-213ENST00000637915 LAS1LQ9Y4W2 734 aaKnown RBP21.24■□□□□ 0.99
CTSD-213ENST00000637915 MAP3K19Q56UN5 1328 aa21.24■□□□□ 0.99
CTSD-213ENST00000637915 MARF1Q9Y4F3 1742 aaKnown RBP21.24■□□□□ 0.99
CTSD-213ENST00000637915 USP54Q70EL1 1684 aa21.23■□□□□ 0.99
CTSD-213ENST00000637915 SULT6B1Q6IMI4 303 aa21.23■□□□□ 0.99
CTSD-213ENST00000637915 ZNF853P0CG23 659 aa21.23■□□□□ 0.99
CTSD-213ENST00000637915 TRIM27P14373 513 aa21.23■□□□□ 0.99
CTSD-213ENST00000637915 GNAI1P63096 354 aa21.23■□□□□ 0.99
CTSD-213ENST00000637915 FTSJ3Q8IY81 847 aaKnown RBP21.23■□□□□ 0.99
CTSD-213ENST00000637915 SBNO1A3KN83 1393 aa21.22■□□□□ 0.99
CTSD-213ENST00000637915 ANP32AP39687 249 aaKnown RBP21.22■□□□□ 0.99
CTSD-213ENST00000637915 ALDH1L2Q3SY69 923 aa21.22■□□□□ 0.99
CTSD-213ENST00000637915 FLT4P35916 1363 aa21.22■□□□□ 0.99
CTSD-213ENST00000637915 ANP32EQ9BTT0 268 aa21.21■□□□□ 0.99
CTSD-213ENST00000637915 ATF7IPQ6VMQ6 1270 aa21.21■□□□□ 0.99
CTSD-213ENST00000637915 PCDHB15Q9Y5E8 787 aa21.21■□□□□ 0.99
CTSD-213ENST00000637915 KIF16BQ96L93 1317 aa21.2■□□□□ 0.98
CTSD-213ENST00000637915 ZNF428Q96B54 188 aa21.2■□□□□ 0.98
CTSD-213ENST00000637915 NOB1Q9ULX3 412 aaKnown RBP21.2■□□□□ 0.98
CTSD-213ENST00000637915 NPHP4O75161 1426 aaPredicted RBP21.2■□□□□ 0.98
CTSD-213ENST00000637915 FAM83GA6ND36 823 aa21.19■□□□□ 0.98
CTSD-213ENST00000637915 MBIPQ9NS73 344 aa21.19■□□□□ 0.98
CTSD-213ENST00000637915 ARHGEF10O15013 1369 aa21.19■□□□□ 0.98
CTSD-213ENST00000637915 CFAP44Q96MT7 982 aa21.19■□□□□ 0.98
CTSD-213ENST00000637915 ADGRL3Q9HAR2 1447 aa21.18■□□□□ 0.98
CTSD-213ENST00000637915 NLRP6P59044 892 aa21.17■□□□□ 0.98
CTSD-213ENST00000637915 RGS3P49796 1198 aa21.17■□□□□ 0.98
CTSD-213ENST00000637915 BRPF1P55201 1214 aaPredicted RBP21.17■□□□□ 0.98
CTSD-213ENST00000637915 RBM33Q96EV2 1170 aaKnown RBP21.17■□□□□ 0.98
CTSD-213ENST00000637915 VAMP4O75379 141 aa21.16■□□□□ 0.98
CTSD-213ENST00000637915 DCTN1Q14203 1278 aa21.16■□□□□ 0.98
CTSD-213ENST00000637915 IPO8O15397 1037 aaKnown RBP21.16■□□□□ 0.98
CTSD-213ENST00000637915 TSPYL6Q8N831 410 aa21.16■□□□□ 0.98
CTSD-213ENST00000637915 PHF8Q9UPP1 1060 aa21.16■□□□□ 0.98
CTSD-213ENST00000637915 AMPHP49418 695 aa21.15■□□□□ 0.98
CTSD-213ENST00000637915 IPO9Q96P70 1041 aaKnown RBP21.14■□□□□ 0.98
CTSD-213ENST00000637915 DDX19BQ9UMR2 479 aa21.14■□□□□ 0.98
CTSD-213ENST00000637915 KDRP35968 1356 aa21.14■□□□□ 0.97
CTSD-213ENST00000637915 NUTM2GQ5VZR2 741 aa21.14■□□□□ 0.97
CTSD-213ENST00000637915 KIF24Q5T7B8 1368 aa21.13■□□□□ 0.97
CTSD-213ENST00000637915 ITPRIPQ8IWB1 547 aa21.13■□□□□ 0.97
CTSD-213ENST00000637915 ABTB2Q8N961 1025 aa21.13■□□□□ 0.97
CTSD-213ENST00000637915 NWD1Q149M9 1564 aa21.12■□□□□ 0.97
CTSD-213ENST00000637915 FAM161AQ3B820 660 aa21.12■□□□□ 0.97
CTSD-213ENST00000637915 TMEM57Q8N5G2 664 aa21.12■□□□□ 0.97
CTSD-213ENST00000637915 IGSF1Q8N6C5 1336 aa21.12■□□□□ 0.97
CTSD-213ENST00000637915 PAK3O75914 559 aaPredicted RBP21.12■□□□□ 0.97
CTSD-213ENST00000637915 C8orf34Q49A92 452 aa21.12■□□□□ 0.97
CTSD-213ENST00000637915 NPM2Q86SE8 214 aaKnown RBP21.12■□□□□ 0.97
CTSD-213ENST00000637915 MRPL50Q8N5N7 158 aaKnown RBP21.12■□□□□ 0.97
CTSD-213ENST00000637915 TWISTNBQ3B726 338 aaPredicted RBP21.11■□□□□ 0.97
CTSD-213ENST00000637915 ERICH6Q7L0X2 663 aa21.11■□□□□ 0.97
CTSD-213ENST00000637915 C8orf58Q8NAV2 365 aa21.11■□□□□ 0.97
CTSD-213ENST00000637915 RWDD1Q9H446 243 aaPredicted RBP21.11■□□□□ 0.97
CTSD-213ENST00000637915 ELL2O00472 640 aaPredicted RBP21.1■□□□□ 0.97
CTSD-213ENST00000637915 EYA1Q99502 592 aa21.1■□□□□ 0.97
CTSD-213ENST00000637915 NOP58Q9Y2X3 529 aaKnown RBP21.1■□□□□ 0.97
CTSD-213ENST00000637915 HOXC9P31274 260 aa21.09■□□□□ 0.97
CTSD-213ENST00000637915 MCM10Q7L590 875 aa21.08■□□□□ 0.97
CTSD-213ENST00000637915 ARHGAP45Q92619 1136 aa21.08■□□□□ 0.96
CTSD-213ENST00000637915 LTN1O94822 1766 aa21.08■□□□□ 0.96
CTSD-213ENST00000637915 VIRMAQ69YN4 1812 aaKnown RBP21.08■□□□□ 0.96
CTSD-213ENST00000637915 ESCO1Q5FWF5 840 aa21.07■□□□□ 0.96
CTSD-213ENST00000637915 CHL1O00533 1208 aa21.06■□□□□ 0.96
CTSD-213ENST00000637915 MTHFSDQ2M296 383 aaKnown RBP21.06■□□□□ 0.96
CTSD-213ENST00000637915 ZBTB40Q9NUA8 1239 aa21.06■□□□□ 0.96
CTSD-213ENST00000637915 CRB1P82279 1406 aa21.06■□□□□ 0.96
CTSD-213ENST00000637915 C14orf37Q86TY3 774 aa21.06■□□□□ 0.96
CTSD-213ENST00000637915 NFAT5O94916 1531 aa21.05■□□□□ 0.96
CTSD-213ENST00000637915 RTL1A6NKG5 1358 aa21.05■□□□□ 0.96
CTSD-213ENST00000637915 FOXO3O43524 673 aa21.05■□□□□ 0.96
CTSD-213ENST00000637915 HDAC1Q13547 482 aaPredicted RBP21.05■□□□□ 0.96
CTSD-213ENST00000637915 PDZRN3Q9UPQ7 1066 aa21.05■□□□□ 0.96
CTSD-213ENST00000637915 PSME1Q06323 249 aa21.03■□□□□ 0.96
CTSD-213ENST00000637915 KIAA0232Q92628 1395 aa21.02■□□□□ 0.96
CTSD-213ENST00000637915 ABCC4O15439 1325 aa21.02■□□□□ 0.95
CTSD-213ENST00000637915 GAS2L2Q8NHY3 880 aa21.01■□□□□ 0.95
CTSD-213ENST00000637915 ZBTB47Q9UFB7 747 aaPredicted RBP21.01■□□□□ 0.95
CTSD-213ENST00000637915 LRRC37A3O60309 1634 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms