RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 ACEP12821 1306 aa23.71■■□□□ 1.39
CTSD-212ENST00000637815 RRS1Q15050 365 aaKnown RBP23.7■■□□□ 1.38
CTSD-212ENST00000637815 FTSJ3Q8IY81 847 aaKnown RBP23.69■■□□□ 1.38
CTSD-212ENST00000637815 RGPD8O14715 1765 aaPredicted RBP23.69■■□□□ 1.38
CTSD-212ENST00000637815 CALD1Q05682 793 aaKnown RBP23.69■■□□□ 1.38
CTSD-212ENST00000637815 SSH2Q76I76 1423 aa23.68■■□□□ 1.38
CTSD-212ENST00000637815 TRIM27P14373 513 aa23.68■■□□□ 1.38
CTSD-212ENST00000637815 ALDH1L2Q3SY69 923 aa23.68■■□□□ 1.38
CTSD-212ENST00000637815 ATF7IPQ6VMQ6 1270 aa23.67■■□□□ 1.38
CTSD-212ENST00000637815 THEMISQ8N1K5 641 aaPredicted RBP23.67■■□□□ 1.38
CTSD-212ENST00000637815 ZNF428Q96B54 188 aa23.67■■□□□ 1.38
CTSD-212ENST00000637815 AMOTL2Q9Y2J4 779 aa23.67■■□□□ 1.38
CTSD-212ENST00000637815 KIF16BQ96L93 1317 aa23.67■■□□□ 1.38
CTSD-212ENST00000637815 PEAK1Q9H792 1746 aa23.67■■□□□ 1.38
CTSD-212ENST00000637815 RGPD1P0DJD0 1748 aa23.66■■□□□ 1.38
CTSD-212ENST00000637815 USP31Q70CQ4 1352 aa23.65■■□□□ 1.38
CTSD-212ENST00000637815 BRPF1P55201 1214 aaPredicted RBP23.65■■□□□ 1.38
CTSD-212ENST00000637815 FMN2Q9NZ56 1722 aa23.65■■□□□ 1.38
CTSD-212ENST00000637815 DDRGK1Q96HY6 314 aa23.64■■□□□ 1.38
CTSD-212ENST00000637815 RWDD1Q9H446 243 aaPredicted RBP23.64■■□□□ 1.38
CTSD-212ENST00000637815 IFT57Q9NWB7 429 aa23.64■■□□□ 1.37
CTSD-212ENST00000637815 NOB1Q9ULX3 412 aaKnown RBP23.64■■□□□ 1.37
CTSD-212ENST00000637815 LMOD3Q0VAK6 560 aa23.63■■□□□ 1.37
CTSD-212ENST00000637815 DDX19BQ9UMR2 479 aa23.63■■□□□ 1.37
CTSD-212ENST00000637815 ZNF853P0CG23 659 aa23.62■■□□□ 1.37
CTSD-212ENST00000637815 GNAI1P63096 354 aa23.62■■□□□ 1.37
CTSD-212ENST00000637815 CEP170BQ9Y4F5 1589 aaPredicted RBP23.62■■□□□ 1.37
CTSD-212ENST00000637815 IPO8O15397 1037 aaKnown RBP23.62■■□□□ 1.37
CTSD-212ENST00000637815 NUTM2FA1L443 756 aa23.6■■□□□ 1.37
CTSD-212ENST00000637815 TTC21AQ8NDW8 1320 aa23.6■■□□□ 1.37
CTSD-212ENST00000637815 EIF4A2Q14240 407 aaKnown RBP23.6■■□□□ 1.37
CTSD-212ENST00000637815 THUMPD2Q9BTF0 503 aaKnown RBP23.59■■□□□ 1.37
CTSD-212ENST00000637815 ITPRIPQ8IWB1 547 aa23.58■■□□□ 1.37
CTSD-212ENST00000637815 LAS1LQ9Y4W2 734 aaKnown RBP23.58■■□□□ 1.37
CTSD-212ENST00000637815 PIK3R4Q99570 1358 aa23.58■■□□□ 1.36
CTSD-212ENST00000637815 PIK3C2AO00443 1686 aa23.57■■□□□ 1.36
CTSD-212ENST00000637815 VAMP4O75379 141 aa23.57■■□□□ 1.36
CTSD-212ENST00000637815 HDAC1Q13547 482 aaPredicted RBP23.57■■□□□ 1.36
CTSD-212ENST00000637815 PLPPR3Q6T4P5 718 aa23.57■■□□□ 1.36
CTSD-212ENST00000637815 CFAP44Q96MT7 982 aa23.57■■□□□ 1.36
CTSD-212ENST00000637815 PDZRN3Q9UPQ7 1066 aa23.57■■□□□ 1.36
CTSD-212ENST00000637815 ANKARQ7Z5J8 1434 aa23.57■■□□□ 1.36
CTSD-212ENST00000637815 TMEM57Q8N5G2 664 aa23.56■■□□□ 1.36
CTSD-212ENST00000637815 MBIPQ9NS73 344 aa23.56■■□□□ 1.36
CTSD-212ENST00000637815 USP54Q70EL1 1684 aa23.55■■□□□ 1.36
CTSD-212ENST00000637815 ZBTB40Q9NUA8 1239 aa23.54■■□□□ 1.36
CTSD-212ENST00000637815 ZNF142P52746 1687 aaPredicted RBP23.54■■□□□ 1.36
CTSD-212ENST00000637815 MARF1Q9Y4F3 1742 aaKnown RBP23.53■■□□□ 1.36
CTSD-212ENST00000637815 ARHGAP45Q92619 1136 aa23.53■■□□□ 1.36
CTSD-212ENST00000637815 CHD2O14647 1828 aaKnown RBP23.53■■□□□ 1.36
CTSD-212ENST00000637815 SULT6B1Q6IMI4 303 aa23.52■■□□□ 1.36
CTSD-212ENST00000637815 AEBP1Q8IUX7 1158 aa23.52■■□□□ 1.36
CTSD-212ENST00000637815 MRPL50Q8N5N7 158 aaKnown RBP23.52■■□□□ 1.36
CTSD-212ENST00000637815 TSPYL6Q8N831 410 aa23.52■■□□□ 1.36
CTSD-212ENST00000637815 ARHGEF10O15013 1369 aa23.51■■□□□ 1.35
CTSD-212ENST00000637815 HSP90AB2PQ58FF8 381 aa23.5■■□□□ 1.35
CTSD-212ENST00000637815 FAM83GA6ND36 823 aa23.5■■□□□ 1.35
CTSD-212ENST00000637815 SBNO1A3KN83 1393 aa23.49■■□□□ 1.35
CTSD-212ENST00000637815 NGDNQ8NEJ9 315 aaKnown RBP23.49■■□□□ 1.35
CTSD-212ENST00000637815 FLT4P35916 1363 aa23.49■■□□□ 1.35
CTSD-212ENST00000637815 KCNA6P17658 529 aa23.49■■□□□ 1.35
CTSD-212ENST00000637815 TRHP20396 242 aaPredicted RBP23.49■■□□□ 1.35
CTSD-212ENST00000637815 TWISTNBQ3B726 338 aaPredicted RBP23.49■■□□□ 1.35
CTSD-212ENST00000637815 MAP3K19Q56UN5 1328 aa23.48■■□□□ 1.35
CTSD-212ENST00000637815 USP19O94966 1318 aa23.48■■□□□ 1.35
CTSD-212ENST00000637815 NBR1Q14596 966 aa23.47■■□□□ 1.35
CTSD-212ENST00000637815 SMC5Q8IY18 1101 aa23.47■■□□□ 1.35
CTSD-212ENST00000637815 DCTN1Q14203 1278 aa23.46■■□□□ 1.35
CTSD-212ENST00000637815 C8orf58Q8NAV2 365 aa23.46■■□□□ 1.35
CTSD-212ENST00000637815 ABCC4O15439 1325 aa23.45■■□□□ 1.35
CTSD-212ENST00000637815 KDRP35968 1356 aa23.45■■□□□ 1.34
CTSD-212ENST00000637815 CHMP4BQ9H444 224 aaKnown RBP23.44■■□□□ 1.34
CTSD-212ENST00000637815 SETD1BQ9UPS6 1966 aaKnown RBP23.44■■□□□ 1.34
CTSD-212ENST00000637815 ADAMTSL3P82987 1691 aa23.43■■□□□ 1.34
CTSD-212ENST00000637815 ELL2O00472 640 aaPredicted RBP23.42■■□□□ 1.34
CTSD-212ENST00000637815 SEC24BO95487 1268 aa23.42■■□□□ 1.34
CTSD-212ENST00000637815 KIF24Q5T7B8 1368 aa23.42■■□□□ 1.34
CTSD-212ENST00000637815 CHL1O00533 1208 aa23.42■■□□□ 1.34
CTSD-212ENST00000637815 ZBTB7BO15156 539 aaPredicted RBP23.42■■□□□ 1.34
CTSD-212ENST00000637815 SOX12O15370 315 aa23.41■■□□□ 1.34
CTSD-212ENST00000637815 KIAA0232Q92628 1395 aa23.41■■□□□ 1.34
CTSD-212ENST00000637815 IGSF1Q8N6C5 1336 aa23.4■■□□□ 1.34
CTSD-212ENST00000637815 CRB1P82279 1406 aa23.4■■□□□ 1.34
CTSD-212ENST00000637815 HAP1P54257 671 aaPredicted RBP23.39■■□□□ 1.34
CTSD-212ENST00000637815 API5Q9BZZ5 524 aaKnown RBP23.38■■□□□ 1.33
CTSD-212ENST00000637815 ANKLE2Q86XL3 938 aa23.38■■□□□ 1.33
CTSD-212ENST00000637815 DAXXQ9UER7 740 aaPredicted RBP23.38■■□□□ 1.33
CTSD-212ENST00000637815 MCM10Q7L590 875 aa23.37■■□□□ 1.33
CTSD-212ENST00000637815 LRRC37A3O60309 1634 aa23.37■■□□□ 1.33
CTSD-212ENST00000637815 AMPHP49418 695 aa23.37■■□□□ 1.33
CTSD-212ENST00000637815 NLRP6P59044 892 aa23.37■■□□□ 1.33
CTSD-212ENST00000637815 NUCB1Q02818 461 aa23.36■■□□□ 1.33
CTSD-212ENST00000637815 RTL5Q5HYW3 569 aaPredicted RBP23.35■■□□□ 1.33
CTSD-212ENST00000637815 LTN1O94822 1766 aa23.35■■□□□ 1.33
CTSD-212ENST00000637815 NWD1Q149M9 1564 aa23.35■■□□□ 1.33
CTSD-212ENST00000637815 SLC4A3P48751 1232 aa23.35■■□□□ 1.33
CTSD-212ENST00000637815 EYA1Q99502 592 aa23.35■■□□□ 1.33
CTSD-212ENST00000637815 USP35Q9P2H5 1018 aa23.34■■□□□ 1.33
CTSD-212ENST00000637815 MTHFSDQ2M296 383 aaKnown RBP23.33■■□□□ 1.33
CTSD-212ENST00000637815 UPF2Q9HAU5 1272 aaKnown RBP23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms