RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-223ENST00000637033 ADGRB1O14514 1584 aa16.16■□□□□ 0.18
CHRNA7-223ENST00000637033 NASPP49321 788 aaPredicted RBP16.15■□□□□ 0.18
CHRNA7-223ENST00000637033 NFE2L2Q16236 605 aa16.15■□□□□ 0.18
CHRNA7-223ENST00000637033 PRPF40AO75400 957 aaKnown RBP16.15■□□□□ 0.18
CHRNA7-223ENST00000637033 BAG4O95429 457 aaKnown RBP16.15■□□□□ 0.18
CHRNA7-223ENST00000637033 SNX21Q969T3 373 aa16.15■□□□□ 0.18
CHRNA7-223ENST00000637033 AK9Q5TCS8 1911 aa16.14■□□□□ 0.17
CHRNA7-223ENST00000637033 CDC45O75419 566 aa16.14■□□□□ 0.17
CHRNA7-223ENST00000637033 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.17
CHRNA7-223ENST00000637033 PLEKHM2Q8IWE5 1019 aa16.14■□□□□ 0.17
CHRNA7-223ENST00000637033 RBM10P98175 930 aaKnown RBP16.13■□□□□ 0.17
CHRNA7-223ENST00000637033 ALDH1L2Q3SY69 923 aa16.13■□□□□ 0.17
CHRNA7-223ENST00000637033 GCC1Q96CN9 775 aa16.13■□□□□ 0.17
CHRNA7-223ENST00000637033 GOLGA6L22H0YM25 854 aa16.13■□□□□ 0.17
CHRNA7-223ENST00000637033 RNF214Q8ND24 703 aa16.13■□□□□ 0.17
CHRNA7-223ENST00000637033 NRXN1Q9ULB1 1477 aa16.13■□□□□ 0.17
CHRNA7-223ENST00000637033 F6X3S4 739 aa16.13■□□□□ 0.17
CHRNA7-223ENST00000637033 TXNDC2Q86VQ3 553 aa16.13■□□□□ 0.17
CHRNA7-223ENST00000637033 DEPDC5O75140 1603 aa16.12■□□□□ 0.17
CHRNA7-223ENST00000637033 VWDEQ8N2E2 1590 aa16.12■□□□□ 0.17
CHRNA7-223ENST00000637033 RPGRIP1LQ68CZ1 1315 aa16.12■□□□□ 0.17
CHRNA7-223ENST00000637033 GNAI1P63096 354 aa16.11■□□□□ 0.17
CHRNA7-223ENST00000637033 ADGRB3O60242 1522 aa16.11■□□□□ 0.17
CHRNA7-223ENST00000637033 MEIS3Q99687 375 aa16.11■□□□□ 0.17
CHRNA7-223ENST00000637033 INO80Q9ULG1 1556 aaPredicted RBP16.1■□□□□ 0.17
CHRNA7-223ENST00000637033 KIAA1210Q9ULL0 1709 aa16.1■□□□□ 0.17
CHRNA7-223ENST00000637033 IL16Q14005 1332 aa16.1■□□□□ 0.17
CHRNA7-223ENST00000637033 SULT6B1Q6IMI4 303 aa16.1■□□□□ 0.17
CHRNA7-223ENST00000637033 GLI2P10070 1586 aa16.1■□□□□ 0.17
CHRNA7-223ENST00000637033 NSD2O96028 1365 aa16.1■□□□□ 0.17
CHRNA7-223ENST00000637033 SDSP20132 328 aa16.09■□□□□ 0.17
CHRNA7-223ENST00000637033 CALD1Q05682 793 aaKnown RBP16.09■□□□□ 0.17
CHRNA7-223ENST00000637033 ANP32BQ92688 251 aaKnown RBP16.09■□□□□ 0.17
CHRNA7-223ENST00000637033 PLEKHG5O94827 1062 aa16.09■□□□□ 0.17
CHRNA7-223ENST00000637033 NSFL1CQ9UNZ2 370 aaKnown RBP16.09■□□□□ 0.17
CHRNA7-223ENST00000637033 KIAA1211Q6ZU35 1233 aa16.08■□□□□ 0.17
CHRNA7-223ENST00000637033 LARP6Q9BRS8 491 aaKnown RBP16.08■□□□□ 0.16
CHRNA7-223ENST00000637033 EXOC6BQ9Y2D4 811 aa16.08■□□□□ 0.16
CHRNA7-223ENST00000637033 GDPD2Q9HCC8 539 aa16.07■□□□□ 0.16
CHRNA7-223ENST00000637033 KIDINS220Q9ULH0 1771 aa16.07■□□□□ 0.16
CHRNA7-223ENST00000637033 PRIM1P49642 420 aaKnown RBP16.07■□□□□ 0.16
CHRNA7-223ENST00000637033 ZMYM3Q14202 1370 aa16.07■□□□□ 0.16
CHRNA7-223ENST00000637033 FOXO3O43524 673 aa16.07■□□□□ 0.16
CHRNA7-223ENST00000637033 ZNF428Q96B54 188 aa16.07■□□□□ 0.16
CHRNA7-223ENST00000637033 UHRF1BP1LA0JNW5 1464 aa16.07■□□□□ 0.16
CHRNA7-223ENST00000637033 IL13P35225 146 aa16.06■□□□□ 0.16
CHRNA7-223ENST00000637033 XPCQ01831 940 aaPredicted RBP16.06■□□□□ 0.16
CHRNA7-223ENST00000637033 TTC22Q5TAA0 569 aa16.06■□□□□ 0.16
CHRNA7-223ENST00000637033 RBSNQ9H1K0 784 aa16.06■□□□□ 0.16
CHRNA7-223ENST00000637033 CIZ1Q9ULV3 898 aaPredicted RBP16.06■□□□□ 0.16
CHRNA7-223ENST00000637033 SLC4A2P04920 1241 aa16.06■□□□□ 0.16
CHRNA7-223ENST00000637033 SKOR2Q2VWA4 1001 aaPredicted RBP16.06■□□□□ 0.16
CHRNA7-223ENST00000637033 USP26Q9BXU7 913 aa16.06■□□□□ 0.16
CHRNA7-223ENST00000637033 CAMSAP1Q5T5Y3 1602 aa16.06■□□□□ 0.16
CHRNA7-223ENST00000637033 SYCE3A1L190 88 aa16.06■□□□□ 0.16
CHRNA7-223ENST00000637033 MSNP26038 577 aaKnown RBP16.06■□□□□ 0.16
CHRNA7-223ENST00000637033 ZSCAN23Q3MJ62 389 aa16.06■□□□□ 0.16
CHRNA7-223ENST00000637033 CFAP44Q96MT7 982 aa16.05■□□□□ 0.16
CHRNA7-223ENST00000637033 IFT57Q9NWB7 429 aa16.05■□□□□ 0.16
CHRNA7-223ENST00000637033 R3HCC1Q9Y3T6 440 aaKnown RBP16.05■□□□□ 0.16
CHRNA7-223ENST00000637033 NCOA3Q9Y6Q9 1424 aa16.05■□□□□ 0.16
CHRNA7-223ENST00000637033 COL3A1P02461 1466 aaPredicted RBP16.05■□□□□ 0.16
CHRNA7-223ENST00000637033 NEK4P51957 841 aa16.05■□□□□ 0.16
CHRNA7-223ENST00000637033 G2E3Q7L622 706 aa16.05■□□□□ 0.16
CHRNA7-223ENST00000637033 RILPL2Q969X0 211 aa16.05■□□□□ 0.16
CHRNA7-223ENST00000637033 YTHDC2Q9H6S0 1430 aaKnown RBP16.05■□□□□ 0.16
CHRNA7-223ENST00000637033 COG3Q96JB2 828 aa16.04■□□□□ 0.16
CHRNA7-223ENST00000637033 API5Q9BZZ5 524 aaKnown RBP16.04■□□□□ 0.16
CHRNA7-223ENST00000637033 MAP4K4O95819 1239 aaPredicted RBP16.04■□□□□ 0.16
CHRNA7-223ENST00000637033 LRRC7Q96NW7 1537 aa16.04■□□□□ 0.16
CHRNA7-223ENST00000637033 DCTPP1Q9H773 170 aa16.04■□□□□ 0.16
CHRNA7-223ENST00000637033 ABCC4O15439 1325 aa16.04■□□□□ 0.16
CHRNA7-223ENST00000637033 CD163L1Q9NR16 1453 aa16.03■□□□□ 0.16
CHRNA7-223ENST00000637033 TRIM6-TRIM34B2RNG4 842 aa16.03■□□□□ 0.16
CHRNA7-223ENST00000637033 UPF3BQ9BZI7 483 aaKnown RBP16.03■□□□□ 0.16
CHRNA7-223ENST00000637033 ADGRB2O60241 1585 aa16.03■□□□□ 0.16
CHRNA7-223ENST00000637033 SETBP1Q9Y6X0 1596 aa16.03■□□□□ 0.16
CHRNA7-223ENST00000637033 KLHL40Q2TBA0 621 aa16.03■□□□□ 0.16
CHRNA7-223ENST00000637033 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHRNA7-223ENST00000637033 GPT2Q8TD30 523 aa16.03■□□□□ 0.16
CHRNA7-223ENST00000637033 MYO3AQ8NEV4 1616 aa16.02■□□□□ 0.16
CHRNA7-223ENST00000637033 INTS3Q68E01 1043 aaKnown RBP16.02■□□□□ 0.16
CHRNA7-223ENST00000637033 CEP85Q6P2H3 762 aa16.02■□□□□ 0.16
CHRNA7-223ENST00000637033 LMBRD1Q9NUN5 540 aa16.02■□□□□ 0.16
CHRNA7-223ENST00000637033 FAM13BQ9NYF5 915 aa16.02■□□□□ 0.16
CHRNA7-223ENST00000637033 RABEP1Q15276 862 aa16.02■□□□□ 0.16
CHRNA7-223ENST00000637033 HSP90AB2PQ58FF8 381 aa16.02■□□□□ 0.16
CHRNA7-223ENST00000637033 IFT172Q9UG01 1749 aa16.02■□□□□ 0.15
CHRNA7-223ENST00000637033 ABCA9Q8IUA7 1624 aa16.01■□□□□ 0.15
CHRNA7-223ENST00000637033 ZMYND15Q9H091 742 aa16.01■□□□□ 0.15
CHRNA7-223ENST00000637033 SLC52A1Q9NWF4 448 aa16.01■□□□□ 0.15
CHRNA7-223ENST00000637033 ZDHHC9Q9Y397 364 aa16.01■□□□□ 0.15
CHRNA7-223ENST00000637033 POGZQ7Z3K3 1410 aa16■□□□□ 0.15
CHRNA7-223ENST00000637033 PPLO60437 1756 aa16■□□□□ 0.15
CHRNA7-223ENST00000637033 MSH6P52701 1360 aa16■□□□□ 0.15
CHRNA7-223ENST00000637033 ARHGAP45Q92619 1136 aa16■□□□□ 0.15
CHRNA7-223ENST00000637033 ST18O60284 1047 aa16■□□□□ 0.15
CHRNA7-223ENST00000637033 ZNF853P0CG23 659 aa16■□□□□ 0.15
CHRNA7-223ENST00000637033 CCDC173Q0VFZ6 552 aa16■□□□□ 0.15
CHRNA7-223ENST00000637033 NUDT16Q96DE0 195 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms