RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 VAMP4O75379 141 aa24.05■■□□□ 1.44
CLN5-216ENST00000636780 EIF4A2Q14240 407 aaKnown RBP24.05■■□□□ 1.44
CLN5-216ENST00000636780 DLC1Q96QB1 1528 aa24.04■■□□□ 1.44
CLN5-216ENST00000636780 TTC21BQ7Z4L5 1316 aa24.04■■□□□ 1.44
CLN5-216ENST00000636780 TRHP20396 242 aaPredicted RBP24.03■■□□□ 1.44
CLN5-216ENST00000636780 PTPRUQ92729 1446 aa24.03■■□□□ 1.44
CLN5-216ENST00000636780 ANKRD26Q9UPS8 1709 aa24.02■■□□□ 1.44
CLN5-216ENST00000636780 DDRGK1Q96HY6 314 aa24.02■■□□□ 1.44
CLN5-216ENST00000636780 FOXO3O43524 673 aa24.02■■□□□ 1.44
CLN5-216ENST00000636780 PNNQ9H307 717 aaKnown RBP24.02■■□□□ 1.44
CLN5-216ENST00000636780 IL16Q14005 1332 aa24.01■■□□□ 1.43
CLN5-216ENST00000636780 SPRYD3Q8NCJ5 442 aa24■■□□□ 1.43
CLN5-216ENST00000636780 ZBTB40Q9NUA8 1239 aa24■■□□□ 1.43
CLN5-216ENST00000636780 LNPKQ9C0E8 428 aa23.99■■□□□ 1.43
CLN5-216ENST00000636780 DDX19BQ9UMR2 479 aa23.99■■□□□ 1.43
CLN5-216ENST00000636780 TWISTNBQ3B726 338 aaPredicted RBP23.98■■□□□ 1.43
CLN5-216ENST00000636780 MRPL50Q8N5N7 158 aaKnown RBP23.97■■□□□ 1.43
CLN5-216ENST00000636780 NCBP3Q53F19 620 aaKnown RBP23.97■■□□□ 1.43
CLN5-216ENST00000636780 ZNF692Q9BU19 519 aaPredicted RBP23.97■■□□□ 1.43
CLN5-216ENST00000636780 EID1Q9Y6B2 187 aa23.97■■□□□ 1.43
CLN5-216ENST00000636780 CT47B1P0C2W7 299 aaPredicted RBP23.96■■□□□ 1.43
CLN5-216ENST00000636780 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.96■■□□□ 1.43
CLN5-216ENST00000636780 NGDNQ8NEJ9 315 aaKnown RBP23.96■■□□□ 1.43
CLN5-216ENST00000636780 SLKQ9H2G2 1235 aaPredicted RBP23.95■■□□□ 1.42
CLN5-216ENST00000636780 NFKBIBQ15653 356 aa23.94■■□□□ 1.42
CLN5-216ENST00000636780 IPO8O15397 1037 aaKnown RBP23.93■■□□□ 1.42
CLN5-216ENST00000636780 MFAP1P55081 439 aaKnown RBP23.93■■□□□ 1.42
CLN5-216ENST00000636780 GNAI1P63096 354 aa23.93■■□□□ 1.42
CLN5-216ENST00000636780 UBR1Q8IWV7 1749 aa23.93■■□□□ 1.42
CLN5-216ENST00000636780 CDC42BPGQ6DT37 1551 aa23.93■■□□□ 1.42
CLN5-216ENST00000636780 KIF16BQ96L93 1317 aa23.92■■□□□ 1.42
CLN5-216ENST00000636780 ZNF853P0CG23 659 aa23.92■■□□□ 1.42
CLN5-216ENST00000636780 LTV1Q96GA3 475 aaPredicted RBP23.92■■□□□ 1.42
CLN5-216ENST00000636780 KCNA6P17658 529 aa23.91■■□□□ 1.42
CLN5-216ENST00000636780 CFAP44Q96MT7 982 aa23.91■■□□□ 1.42
CLN5-216ENST00000636780 IFT57Q9NWB7 429 aa23.91■■□□□ 1.42
CLN5-216ENST00000636780 ZBTB7BO15156 539 aaPredicted RBP23.91■■□□□ 1.42
CLN5-216ENST00000636780 C14orf37Q86TY3 774 aa23.91■■□□□ 1.42
CLN5-216ENST00000636780 TECPR2O15040 1411 aa23.91■■□□□ 1.42
CLN5-216ENST00000636780 MAP3K19Q56UN5 1328 aa23.9■■□□□ 1.42
CLN5-216ENST00000636780 FRAT2O75474 233 aaPredicted RBP23.9■■□□□ 1.42
CLN5-216ENST00000636780 ALDH1L2Q3SY69 923 aa23.9■■□□□ 1.42
CLN5-216ENST00000636780 SIRT1Q96EB6 747 aa23.9■■□□□ 1.42
CLN5-216ENST00000636780 AATKQ6ZMQ8 1374 aa23.9■■□□□ 1.42
CLN5-216ENST00000636780 SIRT2Q8IXJ6 389 aa23.89■■□□□ 1.41
CLN5-216ENST00000636780 ANKRD45Q5TZF3 282 aa23.88■■□□□ 1.41
CLN5-216ENST00000636780 CDK12Q9NYV4 1490 aaPredicted RBP23.88■■□□□ 1.41
CLN5-216ENST00000636780 PLEKHG1Q9ULL1 1385 aa23.88■■□□□ 1.41
CLN5-216ENST00000636780 PLEKHG3A1L390 1219 aa23.88■■□□□ 1.41
CLN5-216ENST00000636780 HDAC1Q13547 482 aaPredicted RBP23.88■■□□□ 1.41
CLN5-216ENST00000636780 NECTIN2Q92692 538 aa23.87■■□□□ 1.41
CLN5-216ENST00000636780 USP6P35125 1406 aa23.86■■□□□ 1.41
CLN5-216ENST00000636780 ZBTB7CA1YPR0 619 aa23.86■■□□□ 1.41
CLN5-216ENST00000636780 NLRP6P59044 892 aa23.86■■□□□ 1.41
CLN5-216ENST00000636780 APBB1O00213 710 aa23.86■■□□□ 1.41
CLN5-216ENST00000636780 SMC5Q8IY18 1101 aa23.86■■□□□ 1.41
CLN5-216ENST00000636780 MTHFSDQ2M296 383 aaKnown RBP23.85■■□□□ 1.41
CLN5-216ENST00000636780 AMPHP49418 695 aa23.84■■□□□ 1.41
CLN5-216ENST00000636780 AAMPQ13685 434 aa23.84■■□□□ 1.41
CLN5-216ENST00000636780 USHBP1Q8N6Y0 703 aa23.84■■□□□ 1.41
CLN5-216ENST00000636780 C3P01024 1663 aa23.82■■□□□ 1.4
CLN5-216ENST00000636780 TBC1D32Q96NH3 1257 aa23.82■■□□□ 1.4
CLN5-216ENST00000636780 EYA1Q99502 592 aa23.82■■□□□ 1.4
CLN5-216ENST00000636780 DLG5Q8TDM6 1919 aa23.82■■□□□ 1.4
CLN5-216ENST00000636780 MON2Q7Z3U7 1717 aa23.81■■□□□ 1.4
CLN5-216ENST00000636780 CHD1LQ86WJ1 897 aa23.81■■□□□ 1.4
CLN5-216ENST00000636780 NUCB1Q02818 461 aa23.8■■□□□ 1.4
CLN5-216ENST00000636780 CALD1Q05682 793 aaKnown RBP23.8■■□□□ 1.4
CLN5-216ENST00000636780 THEMISQ8N1K5 641 aaPredicted RBP23.8■■□□□ 1.4
CLN5-216ENST00000636780 OVOS2A0A0J9YW53 1432 aa23.8■■□□□ 1.4
CLN5-216ENST00000636780 OVOS2Q6IE36 1432 aa23.8■■□□□ 1.4
CLN5-216ENST00000636780 C16orf71Q8IYS4 520 aaPredicted RBP23.79■■□□□ 1.4
CLN5-216ENST00000636780 TBC1D2Q9BYX2 928 aa23.79■■□□□ 1.4
CLN5-216ENST00000636780 TBX22Q9Y458 520 aa23.79■■□□□ 1.4
CLN5-216ENST00000636780 F6X3S4 739 aa23.79■■□□□ 1.4
CLN5-216ENST00000636780 G2E3Q7L622 706 aa23.79■■□□□ 1.4
CLN5-216ENST00000636780 XPCQ01831 940 aaPredicted RBP23.78■■□□□ 1.4
CLN5-216ENST00000636780 LMOD3Q0VAK6 560 aa23.78■■□□□ 1.4
CLN5-216ENST00000636780 UPF2Q9HAU5 1272 aaKnown RBP23.78■■□□□ 1.4
CLN5-216ENST00000636780 PEAK1Q9H792 1746 aa23.78■■□□□ 1.4
CLN5-216ENST00000636780 RGPD8O14715 1765 aaPredicted RBP23.77■■□□□ 1.4
CLN5-216ENST00000636780 ITSN1Q15811 1721 aa23.77■■□□□ 1.4
CLN5-216ENST00000636780 ABTB2Q8N961 1025 aa23.77■■□□□ 1.4
CLN5-216ENST00000636780 AKAP12Q02952 1782 aa23.76■■□□□ 1.39
CLN5-216ENST00000636780 RIMS1Q86UR5 1692 aaKnown RBP23.76■■□□□ 1.39
CLN5-216ENST00000636780 CHL1O00533 1208 aa23.76■■□□□ 1.39
CLN5-216ENST00000636780 SLC4A2P04920 1241 aa23.76■■□□□ 1.39
CLN5-216ENST00000636780 SLC4A10Q6U841 1118 aa23.76■■□□□ 1.39
CLN5-216ENST00000636780 C22orf23Q9BZE7 217 aa23.76■■□□□ 1.39
CLN5-216ENST00000636780 ABCC4O15439 1325 aa23.75■■□□□ 1.39
CLN5-216ENST00000636780 KNDC1Q76NI1 1749 aa23.74■■□□□ 1.39
CLN5-216ENST00000636780 OTUD7AQ8TE49 926 aaPredicted RBP23.74■■□□□ 1.39
CLN5-216ENST00000636780 SMARCA5O60264 1052 aaPredicted RBP23.73■■□□□ 1.39
CLN5-216ENST00000636780 BRPF1P55201 1214 aaPredicted RBP23.73■■□□□ 1.39
CLN5-216ENST00000636780 TSPYL4Q9UJ04 414 aa23.73■■□□□ 1.39
CLN5-216ENST00000636780 MEIS3Q99687 375 aa23.72■■□□□ 1.39
CLN5-216ENST00000636780 SSH2Q76I76 1423 aa23.72■■□□□ 1.39
CLN5-216ENST00000636780 ARHGAP45Q92619 1136 aa23.71■■□□□ 1.39
CLN5-216ENST00000636780 RTF1Q92541 710 aaKnown RBP23.71■■□□□ 1.39
CLN5-216ENST00000636780 ZNF428Q96B54 188 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms