RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 CEBPZQ03701 1054 aaKnown RBP17.14■□□□□ 0.33
GABRB3-219ENST00000636466 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.33
GABRB3-219ENST00000636466 PRDM11Q9NQV5 511 aa17.14■□□□□ 0.33
GABRB3-219ENST00000636466 C14orf93Q9H972 538 aaKnown RBP17.13■□□□□ 0.33
GABRB3-219ENST00000636466 STK3Q13188 491 aa17.13■□□□□ 0.33
GABRB3-219ENST00000636466 IL27Q8NEV9 243 aa17.13■□□□□ 0.33
GABRB3-219ENST00000636466 WASLO00401 505 aaPredicted RBP17.12■□□□□ 0.33
GABRB3-219ENST00000636466 CCT4P50991 539 aaKnown RBP17.12■□□□□ 0.33
GABRB3-219ENST00000636466 CABP4P57796 275 aa17.11■□□□□ 0.33
GABRB3-219ENST00000636466 NUTM2BA6NNL0 878 aaPredicted RBP17.11■□□□□ 0.33
GABRB3-219ENST00000636466 NUTM2EB1AL46 878 aaPredicted RBP17.11■□□□□ 0.33
GABRB3-219ENST00000636466 PTCD1O75127 700 aaKnown RBP17.11■□□□□ 0.33
GABRB3-219ENST00000636466 NUTM2AQ8IVF1 878 aaPredicted RBP17.11■□□□□ 0.33
GABRB3-219ENST00000636466 NUTM1Q86Y26 1132 aa17.11■□□□□ 0.33
GABRB3-219ENST00000636466 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
GABRB3-219ENST00000636466 NASPP49321 788 aaPredicted RBP17.1■□□□□ 0.33
GABRB3-219ENST00000636466 RABEP1Q15276 862 aa17.1■□□□□ 0.33
GABRB3-219ENST00000636466 DHX29Q7Z478 1369 aaKnown RBP17.1■□□□□ 0.33
GABRB3-219ENST00000636466 RRP12Q5JTH9 1297 aaKnown RBP17.1■□□□□ 0.33
GABRB3-219ENST00000636466 CWC27Q6UX04 472 aaKnown RBP17.09■□□□□ 0.33
GABRB3-219ENST00000636466 SDF4Q9BRK5 362 aa17.09■□□□□ 0.33
GABRB3-219ENST00000636466 NOL10Q9BSC4 688 aaKnown RBP17.09■□□□□ 0.33
GABRB3-219ENST00000636466 UPF3BQ9BZI7 483 aaKnown RBP17.09■□□□□ 0.33
GABRB3-219ENST00000636466 CT47B1P0C2W7 299 aaPredicted RBP17.09■□□□□ 0.33
GABRB3-219ENST00000636466 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
GABRB3-219ENST00000636466 CCDC73Q6ZRK6 1079 aa17.09■□□□□ 0.33
GABRB3-219ENST00000636466 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
GABRB3-219ENST00000636466 FAM13BQ9NYF5 915 aa17.09■□□□□ 0.33
GABRB3-219ENST00000636466 SASS6Q6UVJ0 657 aa17.08■□□□□ 0.33
GABRB3-219ENST00000636466 TPM3P06753 285 aa17.08■□□□□ 0.32
GABRB3-219ENST00000636466 MEX3CQ5U5Q3 659 aaKnown RBP17.08■□□□□ 0.32
GABRB3-219ENST00000636466 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.32
GABRB3-219ENST00000636466 TRIM27P14373 513 aa17.08■□□□□ 0.32
GABRB3-219ENST00000636466 AACSQ86V21 672 aa17.08■□□□□ 0.32
GABRB3-219ENST00000636466 ERICH2A1L162 156 aa17.08■□□□□ 0.32
GABRB3-219ENST00000636466 NOC3LQ8WTT2 800 aaKnown RBP17.08■□□□□ 0.32
GABRB3-219ENST00000636466 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
GABRB3-219ENST00000636466 CHMP4CQ96CF2 233 aa17.07■□□□□ 0.32
GABRB3-219ENST00000636466 NINLQ9Y2I6 1382 aa17.07■□□□□ 0.32
GABRB3-219ENST00000636466 TRAPPC8Q9Y2L5 1435 aa17.07■□□□□ 0.32
GABRB3-219ENST00000636466 TESK2Q96S53 571 aa17.06■□□□□ 0.32
GABRB3-219ENST00000636466 CNNM1Q9NRU3 951 aa17.06■□□□□ 0.32
GABRB3-219ENST00000636466 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.06■□□□□ 0.32
GABRB3-219ENST00000636466 UGGT2Q9NYU1 1516 aa17.06■□□□□ 0.32
GABRB3-219ENST00000636466 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
GABRB3-219ENST00000636466 GNAT3A8MTJ3 354 aa17.06■□□□□ 0.32
GABRB3-219ENST00000636466 MRE11P49959 708 aa17.06■□□□□ 0.32
GABRB3-219ENST00000636466 FKBP4Q02790 459 aaKnown RBP eCLIP17.06■□□□□ 0.32
GABRB3-219ENST00000636466 FAM43AQ8N2R8 423 aa17.06■□□□□ 0.32
GABRB3-219ENST00000636466 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
GABRB3-219ENST00000636466 PSMA5P28066 241 aa17.05■□□□□ 0.32
GABRB3-219ENST00000636466 HSP90AB2PQ58FF8 381 aa17.05■□□□□ 0.32
GABRB3-219ENST00000636466 K7ELQ4 463 aaPredicted RBP17.05■□□□□ 0.32
GABRB3-219ENST00000636466 ANXA1P04083 346 aa17.04■□□□□ 0.32
GABRB3-219ENST00000636466 AMOTL1Q8IY63 956 aa17.04■□□□□ 0.32
GABRB3-219ENST00000636466 IGHDP01880 384 aa17.04■□□□□ 0.32
GABRB3-219ENST00000636466 NCKAP5LQ9HCH0 1330 aa17.04■□□□□ 0.32
GABRB3-219ENST00000636466 TNNQ9UQP3 1299 aa17.04■□□□□ 0.32
GABRB3-219ENST00000636466 HOMER1Q86YM7 354 aa17.03■□□□□ 0.32
GABRB3-219ENST00000636466 RPAP2Q8IXW5 612 aaPredicted RBP17.03■□□□□ 0.32
GABRB3-219ENST00000636466 KLHL34Q8N239 644 aa17.03■□□□□ 0.32
GABRB3-219ENST00000636466 PHF8Q9UPP1 1060 aa17.03■□□□□ 0.32
GABRB3-219ENST00000636466 SAFBQ15424 915 aaKnown RBP eCLIP17.03■□□□□ 0.32
GABRB3-219ENST00000636466 PCMTD1Q96MG8 357 aaPredicted RBP17.03■□□□□ 0.32
GABRB3-219ENST00000636466 TAF7Q15545 349 aaPredicted RBP17.02■□□□□ 0.32
GABRB3-219ENST00000636466 KIF6Q6ZMV9 814 aa17.02■□□□□ 0.32
GABRB3-219ENST00000636466 IFT57Q9NWB7 429 aa17.02■□□□□ 0.32
GABRB3-219ENST00000636466 TSR1Q2NL82 804 aaKnown RBP17.02■□□□□ 0.31
GABRB3-219ENST00000636466 TSHZ3Q63HK5 1081 aa17.02■□□□□ 0.31
GABRB3-219ENST00000636466 CARD14Q9BXL6 1004 aa17.02■□□□□ 0.31
GABRB3-219ENST00000636466 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.31
GABRB3-219ENST00000636466 DENND4BO75064 1496 aaPredicted RBP17.02■□□□□ 0.31
GABRB3-219ENST00000636466 ACEP12821 1306 aa17.01■□□□□ 0.31
GABRB3-219ENST00000636466 CYP46A1Q9Y6A2 500 aa17.01■□□□□ 0.31
GABRB3-219ENST00000636466 LARP6Q9BRS8 491 aaKnown RBP17.01■□□□□ 0.31
GABRB3-219ENST00000636466 TRIM34Q9BYJ4 488 aa17.01■□□□□ 0.31
GABRB3-219ENST00000636466 RSPH6AQ9H0K4 717 aa17.01■□□□□ 0.31
GABRB3-219ENST00000636466 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
GABRB3-219ENST00000636466 SYCP2Q9BX26 1530 aa17.01■□□□□ 0.31
GABRB3-219ENST00000636466 PLCH2O75038 1416 aa17■□□□□ 0.31
GABRB3-219ENST00000636466 ERC1Q8IUD2 1116 aa17■□□□□ 0.31
GABRB3-219ENST00000636466 MCM4P33991 863 aa17■□□□□ 0.31
GABRB3-219ENST00000636466 JAKMIP1Q96N16 626 aaKnown RBP17■□□□□ 0.31
GABRB3-219ENST00000636466 KDM5BQ9UGL1 1544 aa17■□□□□ 0.31
GABRB3-219ENST00000636466 FERMT3Q86UX7 667 aa17■□□□□ 0.31
GABRB3-219ENST00000636466 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
GABRB3-219ENST00000636466 PIP4K2BP78356 416 aa17■□□□□ 0.31
GABRB3-219ENST00000636466 R3HCC1Q9Y3T6 440 aaKnown RBP17■□□□□ 0.31
GABRB3-219ENST00000636466 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
GABRB3-219ENST00000636466 ASXL2Q76L83 1435 aa16.99■□□□□ 0.31
GABRB3-219ENST00000636466 CCDC57Q2TAC2 916 aa16.99■□□□□ 0.31
GABRB3-219ENST00000636466 TTC39AQ5SRH9 613 aa16.99■□□□□ 0.31
GABRB3-219ENST00000636466 CCDC158Q5M9N0 1113 aa16.99■□□□□ 0.31
GABRB3-219ENST00000636466 TRIM5Q9C035 493 aa16.99■□□□□ 0.31
GABRB3-219ENST00000636466 BOLA2Q9H3K6 86 aa16.98■□□□□ 0.31
GABRB3-219ENST00000636466 RAPGEF6Q8TEU7 1601 aa16.98■□□□□ 0.31
GABRB3-219ENST00000636466 MCM2P49736 904 aa16.98■□□□□ 0.31
GABRB3-219ENST00000636466 MBIPQ9NS73 344 aa16.98■□□□□ 0.31
GABRB3-219ENST00000636466 SPC24Q8NBT2 197 aa16.98■□□□□ 0.31
GABRB3-219ENST00000636466 LRRFIP2Q9Y608 721 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms