RNA–Protein interactions for RNA: ENST00000636448.1

CACNA1D-209, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 3,978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-209ENST00000636448 TSPYL6Q8N831 410 aa9.77□□□□□ -0.84
CACNA1D-209ENST00000636448 GAS2L2Q8NHY3 880 aa9.77□□□□□ -0.84
CACNA1D-209ENST00000636448 ZRANB1Q9UGI0 708 aa9.77□□□□□ -0.84
CACNA1D-209ENST00000636448 SPG7Q9UQ90 795 aa9.77□□□□□ -0.84
CACNA1D-209ENST00000636448 TPM4P67936 248 aa9.77□□□□□ -0.85
CACNA1D-209ENST00000636448 NCBP3Q53F19 620 aaKnown RBP9.77□□□□□ -0.85
CACNA1D-209ENST00000636448 ABTB2Q8N961 1025 aa9.77□□□□□ -0.85
CACNA1D-209ENST00000636448 SYTL4Q96C24 671 aaPredicted RBP9.77□□□□□ -0.85
CACNA1D-209ENST00000636448 JAKMIP1Q96N16 626 aaKnown RBP9.77□□□□□ -0.85
CACNA1D-209ENST00000636448 SNAPC4Q5SXM2 1469 aa9.77□□□□□ -0.85
CACNA1D-209ENST00000636448 ROCK1Q13464 1354 aa9.77□□□□□ -0.85
CACNA1D-209ENST00000636448 MYL6BP14649 208 aa9.77□□□□□ -0.85
CACNA1D-209ENST00000636448 PSME1Q06323 249 aa9.77□□□□□ -0.85
CACNA1D-209ENST00000636448 CKAP2LQ8IYA6 745 aa9.77□□□□□ -0.85
CACNA1D-209ENST00000636448 TFIP11Q9UBB9 837 aaKnown RBP9.77□□□□□ -0.85
CACNA1D-209ENST00000636448 URB2Q14146 1524 aaKnown RBP9.77□□□□□ -0.85
CACNA1D-209ENST00000636448 FBXO31Q5XUX0 539 aaPredicted RBP9.76□□□□□ -0.85
CACNA1D-209ENST00000636448 AAMPQ13685 434 aa9.76□□□□□ -0.85
CACNA1D-209ENST00000636448 NFE2L2Q16236 605 aa9.76□□□□□ -0.85
CACNA1D-209ENST00000636448 LARP1BQ659C4 914 aaKnown RBP9.76□□□□□ -0.85
CACNA1D-209ENST00000636448 ZGPATQ8N5A5 531 aaKnown RBP9.76□□□□□ -0.85
CACNA1D-209ENST00000636448 PDILTQ8N807 584 aa9.76□□□□□ -0.85
CACNA1D-209ENST00000636448 TRERF1Q96PN7 1200 aa9.76□□□□□ -0.85
CACNA1D-209ENST00000636448 NLRP2Q9NX02 1062 aa9.76□□□□□ -0.85
CACNA1D-209ENST00000636448 CCDC73Q6ZRK6 1079 aa9.76□□□□□ -0.85
CACNA1D-209ENST00000636448 JARID2Q92833 1246 aaPredicted RBP9.76□□□□□ -0.85
CACNA1D-209ENST00000636448 SPDYE4A6NLX3 237 aa9.75□□□□□ -0.85
CACNA1D-209ENST00000636448 TPM2P07951 284 aa9.75□□□□□ -0.85
CACNA1D-209ENST00000636448 GNAI3P08754 354 aa9.75□□□□□ -0.85
CACNA1D-209ENST00000636448 FAM69CQ0P6D2 419 aa9.75□□□□□ -0.85
CACNA1D-209ENST00000636448 ATAD2Q6PL18 1390 aa9.75□□□□□ -0.85
CACNA1D-209ENST00000636448 CASTP20810 708 aaKnown RBP9.75□□□□□ -0.85
CACNA1D-209ENST00000636448 GUCY1B3Q02153 619 aa9.75□□□□□ -0.85
CACNA1D-209ENST00000636448 CNTROBQ8N137 903 aa9.75□□□□□ -0.85
CACNA1D-209ENST00000636448 OSCARQ8IYS5 282 aa9.75□□□□□ -0.85
CACNA1D-209ENST00000636448 MEIS3Q99687 375 aa9.75□□□□□ -0.85
CACNA1D-209ENST00000636448 SYNJ2O15056 1496 aa9.75□□□□□ -0.85
CACNA1D-209ENST00000636448 SMC2O95347 1197 aa9.74□□□□□ -0.85
CACNA1D-209ENST00000636448 OTUD7AQ8TE49 926 aaPredicted RBP9.74□□□□□ -0.85
CACNA1D-209ENST00000636448 FYB1O15117 783 aa9.74□□□□□ -0.85
CACNA1D-209ENST00000636448 RNF20Q5VTR2 975 aa9.74□□□□□ -0.85
CACNA1D-209ENST00000636448 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.74□□□□□ -0.85
CACNA1D-209ENST00000636448 KAT6BQ8WYB5 2073 aa9.74□□□□□ -0.85
CACNA1D-209ENST00000636448 HECW1Q76N89 1606 aa9.74□□□□□ -0.85
CACNA1D-209ENST00000636448 HCLS1P14317 486 aaPredicted RBP9.74□□□□□ -0.85
CACNA1D-209ENST00000636448 CCDC30Q5VVM6 783 aa9.74□□□□□ -0.85
CACNA1D-209ENST00000636448 TTC5Q8N0Z6 440 aa9.74□□□□□ -0.85
CACNA1D-209ENST00000636448 MRC2Q9UBG0 1479 aa9.74□□□□□ -0.85
CACNA1D-209ENST00000636448 ERICH4A6NGS2 130 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 RRP9O43818 475 aaKnown RBP9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 FCHSD2O94868 740 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 BRPF1P55201 1214 aaPredicted RBP9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 PRPF40BQ6NWY9 871 aaKnown RBP9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 PARD3Q8TEW0 1356 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 C8orf58Q8NAV2 365 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 MBIPQ9NS73 344 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 PEG3Q9GZU2 1588 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 PRIM1P49642 420 aaKnown RBP9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 NFXL1Q6ZNB6 911 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 AACSQ86V21 672 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 TNMDQ9H2S6 317 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 CIZ1Q9ULV3 898 aaPredicted RBP9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 KIF3AQ9Y496 699 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 LRRFIP2Q9Y608 721 aaKnown RBP9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 IDI1Q13907 227 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 AEBP1Q8IUX7 1158 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 CCDC8Q9H0W5 538 aaPredicted RBP9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 BOLA2Q9H3K6 86 aa9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 TTC12Q9H892 705 aaPredicted RBP9.73□□□□□ -0.85
CACNA1D-209ENST00000636448 NCKAP5LQ9HCH0 1330 aa9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 SDSP20132 328 aa9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 GTF2E1P29083 439 aaPredicted RBP9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 ME1P48163 572 aa9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 WDR33Q9C0J8 1336 aaKnown RBP9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 GIMAP6Q6P9H5 292 aa9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 RAB11FIP4Q86YS3 637 aa9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 PHACTR3Q96KR7 559 aa9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 C16orf45Q96MC5 204 aaPredicted RBP9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 SRCIN1Q9C0H9 1055 aa9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 TRMT1Q9NXH9 659 aaKnown RBP9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 CYP46A1Q9Y6A2 500 aa9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 ABCA10Q8WWZ4 1543 aa9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 MX1P20591 662 aa9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 MNS1Q8NEH6 495 aa9.72□□□□□ -0.85
CACNA1D-209ENST00000636448 RAD21O60216 631 aa9.71□□□□□ -0.85
CACNA1D-209ENST00000636448 ZSCAN23Q3MJ62 389 aa9.71□□□□□ -0.85
CACNA1D-209ENST00000636448 RRP12Q5JTH9 1297 aaKnown RBP9.71□□□□□ -0.85
CACNA1D-209ENST00000636448 SYNE3Q6ZMZ3 975 aa9.71□□□□□ -0.85
CACNA1D-209ENST00000636448 NECAB1Q8N987 351 aa9.71□□□□□ -0.85
CACNA1D-209ENST00000636448 TMX1Q9H3N1 280 aa9.71□□□□□ -0.85
CACNA1D-209ENST00000636448 CWC22Q9HCG8 908 aaKnown RBP9.71□□□□□ -0.85
CACNA1D-209ENST00000636448 HDAC5Q9UQL6 1122 aa9.71□□□□□ -0.85
CACNA1D-209ENST00000636448 CPA1P15085 419 aa9.71□□□□□ -0.86
CACNA1D-209ENST00000636448 TSC1Q92574 1164 aa9.71□□□□□ -0.86
CACNA1D-209ENST00000636448 KINO60870 393 aaKnown RBP9.71□□□□□ -0.86
CACNA1D-209ENST00000636448 TPM3P06753 285 aa9.71□□□□□ -0.86
CACNA1D-209ENST00000636448 ISM2Q6H9L7 571 aa9.71□□□□□ -0.86
CACNA1D-209ENST00000636448 C17orf53Q8N3J3 647 aaPredicted RBP9.71□□□□□ -0.86
CACNA1D-209ENST00000636448 NUDT16Q96DE0 195 aaKnown RBP9.71□□□□□ -0.86
CACNA1D-209ENST00000636448 NOC3LQ8WTT2 800 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms