RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	USP31	Q70CQ4	1352 aa		13.73	□□□□□ -0.21
ARHGEF9-223	ENST00000636102	CCDC146	Q8IYE0	955 aa		13.73	□□□□□ -0.21
ARHGEF9-223	ENST00000636102	DUSP27	Q5VZP5	1158 aa		13.72	□□□□□ -0.21
ARHGEF9-223	ENST00000636102	PNPLA6	Q8IY17	1366 aa		13.72	□□□□□ -0.21
ARHGEF9-223	ENST00000636102	ITSN1	Q15811	1721 aa		13.72	□□□□□ -0.21
ARHGEF9-223	ENST00000636102	LMOD2	Q6P5Q4	547 aa		13.72	□□□□□ -0.21
ARHGEF9-223	ENST00000636102	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.72	□□□□□ -0.21
ARHGEF9-223	ENST00000636102	NRK	Q7Z2Y5	1582 aa		13.71	□□□□□ -0.21
ARHGEF9-223	ENST00000636102	DIAPH1	O60610	1272 aa	Known RBP	13.71	□□□□□ -0.21
ARHGEF9-223	ENST00000636102	PLEKHG5	O94827	1062 aa		13.71	□□□□□ -0.21
ARHGEF9-223	ENST00000636102	BRINP3	Q76B58	766 aa		13.71	□□□□□ -0.21
ARHGEF9-223	ENST00000636102	U2SURP	O15042	1029 aa	Known RBP	13.7	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.7	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	TRMT2A	Q8IZ69	625 aa	Known RBP	13.7	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	SLFN5	Q08AF3	891 aa		13.7	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	DAXX	Q9UER7	740 aa	Predicted RBP	13.7	□□□□□ -0.22
ARHGEF9-223	ENST00000636102		E9PSI1	815 aa		13.69	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	NCBP3	Q53F19	620 aa	Known RBP	13.69	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	KIF20B	Q96Q89	1820 aa		13.69	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	MAP3K19	Q56UN5	1328 aa		13.68	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	APAF1	O14727	1248 aa		13.67	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	IL13	P35225	146 aa		13.67	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	HSP90AB2P	Q58FF8	381 aa		13.67	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	CRBN	Q96SW2	442 aa		13.67	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	NPHP3	Q7Z494	1330 aa		13.67	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	COL3A1	P02461	1466 aa	Predicted RBP	13.67	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.67	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	ANKRD26	Q9UPS8	1709 aa		13.67	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	XIRP1	Q702N8	1843 aa	Known RBP	13.66	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	AMPH	P49418	695 aa		13.66	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	RUNDC1	Q96C34	613 aa		13.66	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	PIK3C2A	O00443	1686 aa		13.65	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	RRP9	O43818	475 aa	Known RBP	13.65	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	GC	P02774	474 aa		13.65	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	ZMYND15	Q9H091	742 aa		13.65	□□□□□ -0.22
ARHGEF9-223	ENST00000636102	EIF4A2	Q14240	407 aa	Known RBP	13.64	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	PLIN1	O60240	522 aa		13.64	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	LTBP4	Q8N2S1	1624 aa		13.63	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	HMOX1	P09601	288 aa		13.63	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	L1TD1	Q5T7N2	865 aa	Known RBP	13.63	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	TCP11L2	Q8N4U5	519 aa		13.63	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	KCNH5	Q8NCM2	988 aa		13.63	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	PLEKHF1	Q96S99	279 aa		13.63	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	ZBTB7C	A1YPR0	619 aa		13.63	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	AAMP	Q13685	434 aa		13.63	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	RRP7A	Q9Y3A4	280 aa	Known RBP	13.63	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	KDM2B	Q8NHM5	1336 aa		13.63	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	SBNO1	A3KN83	1393 aa		13.63	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.62	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	NEUROD2	Q15784	382 aa		13.62	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	CABLES1	Q8TDN4	633 aa		13.62	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	SPATA31A3	Q5VYP0	1347 aa		13.62	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	SHPRH	Q149N8	1683 aa		13.61	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	FCHSD2	O94868	740 aa		13.61	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	HOXC9	P31274	260 aa		13.61	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	VSIG10	Q8N0Z9	540 aa		13.61	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	USP19	O94966	1318 aa		13.61	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	SOS2	Q07890	1332 aa	Predicted RBP	13.61	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	FRAT2	O75474	233 aa	Predicted RBP	13.61	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	KIF1A	Q12756	1690 aa		13.61	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	PXDN	Q92626	1479 aa		13.6	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	FLT4	P35916	1363 aa		13.6	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	PDE3A	Q14432	1141 aa		13.6	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	PRKAR2B	P31323	418 aa		13.6	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	ARHGEF25	Q86VW2	580 aa		13.6	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.6	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	ZC3H6	P61129	1189 aa	Known RBP	13.59	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	CCDC27	Q2M243	656 aa		13.59	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	IP6K1	Q92551	441 aa		13.59	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	LTV1	Q96GA3	475 aa	Predicted RBP	13.59	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.58	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	SULT6B1	Q6IMI4	303 aa		13.58	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	AEBP1	Q8IUX7	1158 aa		13.58	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	PHACTR3	Q96KR7	559 aa		13.58	□□□□□ -0.23
ARHGEF9-223	ENST00000636102	FAM161A	Q3B820	660 aa		13.58	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	WDR63	Q8IWG1	891 aa		13.58	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	PNN	Q9H307	717 aa	Known RBP	13.58	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	MAP2	P11137	1827 aa	Known RBP	13.58	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	TNS3	Q68CZ2	1445 aa		13.58	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	WWC1	Q8IX03	1113 aa		13.57	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	EYA1	Q99502	592 aa		13.57	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.57	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	MAPK8IP3	Q9UPT6	1336 aa		13.57	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	TMPO	P42166	694 aa	Known RBP	13.57	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	C20orf194	Q5TEA3	1177 aa		13.57	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	PEAK1	Q9H792	1746 aa		13.57	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	KIF24	Q5T7B8	1368 aa		13.56	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	HSP90AA1	P07900	732 aa	Known RBP	13.56	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	AXIN2	Q9Y2T1	843 aa		13.56	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	NFAT5	O94916	1531 aa		13.56	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	VIRMA	Q69YN4	1812 aa	Known RBP	13.56	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	CLCN1	P35523	988 aa		13.55	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	SLC4A3	P48751	1232 aa		13.55	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	PHF23	Q9BUL5	403 aa	Predicted RBP	13.55	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.55	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	ARHGEF10	O15013	1369 aa		13.55	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	MARF1	Q9Y4F3	1742 aa	Known RBP	13.55	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	PIP4K2B	P78356	416 aa		13.55	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	SLIT3	O75094	1523 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms