RNA–Protein interactions for RNA: ENST00000635885.1

SYNGAP1-209, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 191 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-209ENST00000635885 PHACTR3Q96KR7 559 aa13.29□□□□□ -0.28
SYNGAP1-209ENST00000635885 RGPD1P0DJD0 1748 aa13.29□□□□□ -0.28
SYNGAP1-209ENST00000635885 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
SYNGAP1-209ENST00000635885 OVOS2A0A0J9YW53 1432 aa13.29□□□□□ -0.28
SYNGAP1-209ENST00000635885 USP6P35125 1406 aa13.29□□□□□ -0.28
SYNGAP1-209ENST00000635885 OVOS2Q6IE36 1432 aa13.29□□□□□ -0.28
SYNGAP1-209ENST00000635885 SETD1BQ9UPS6 1966 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-209ENST00000635885 MVPQ14764 893 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-209ENST00000635885 RRS1Q15050 365 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-209ENST00000635885 FAM161AQ3B820 660 aa13.28□□□□□ -0.28
SYNGAP1-209ENST00000635885 DZIP1LQ8IYY4 767 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-209ENST00000635885 SMC4Q9NTJ3 1288 aa13.28□□□□□ -0.28
SYNGAP1-209ENST00000635885 ZBTB47Q9UFB7 747 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-209ENST00000635885 PCDHB15Q9Y5E8 787 aa13.28□□□□□ -0.28
SYNGAP1-209ENST00000635885 SSH2Q76I76 1423 aa13.28□□□□□ -0.28
SYNGAP1-209ENST00000635885 CHD2O14647 1828 aaKnown RBP13.27□□□□□ -0.28
SYNGAP1-209ENST00000635885 RGS3P49796 1198 aa13.27□□□□□ -0.29
SYNGAP1-209ENST00000635885 CALD1Q05682 793 aaKnown RBP13.27□□□□□ -0.29
SYNGAP1-209ENST00000635885 ZNF142P52746 1687 aaPredicted RBP13.27□□□□□ -0.29
SYNGAP1-209ENST00000635885 ALDH1L2Q3SY69 923 aa13.26□□□□□ -0.29
SYNGAP1-209ENST00000635885 C8orf34Q49A92 452 aa13.26□□□□□ -0.29
SYNGAP1-209ENST00000635885 USP31Q70CQ4 1352 aa13.26□□□□□ -0.29
SYNGAP1-209ENST00000635885 USP54Q70EL1 1684 aa13.25□□□□□ -0.29
SYNGAP1-209ENST00000635885 TTC21AQ8NDW8 1320 aa13.25□□□□□ -0.29
SYNGAP1-209ENST00000635885 NUTM2FA1L443 756 aa13.25□□□□□ -0.29
SYNGAP1-209ENST00000635885 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
SYNGAP1-209ENST00000635885 RWDD1Q9H446 243 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-209ENST00000635885 NOB1Q9ULX3 412 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-209ENST00000635885 MARF1Q9Y4F3 1742 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-209ENST00000635885 GNAI1P63096 354 aa13.24□□□□□ -0.29
SYNGAP1-209ENST00000635885 LMOD3Q0VAK6 560 aa13.24□□□□□ -0.29
SYNGAP1-209ENST00000635885 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-209ENST00000635885 ATF7IPQ6VMQ6 1270 aa13.24□□□□□ -0.29
SYNGAP1-209ENST00000635885 FTSJ3Q8IY81 847 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-209ENST00000635885 IFT57Q9NWB7 429 aa13.24□□□□□ -0.29
SYNGAP1-209ENST00000635885 LAS1LQ9Y4W2 734 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-209ENST00000635885 PIK3C2AO00443 1686 aa13.24□□□□□ -0.29
SYNGAP1-209ENST00000635885 IPO8O15397 1037 aaKnown RBP13.23□□□□□ -0.29
SYNGAP1-209ENST00000635885 TRIM27P14373 513 aa13.23□□□□□ -0.29
SYNGAP1-209ENST00000635885 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-209ENST00000635885 ZNF428Q96B54 188 aa13.23□□□□□ -0.29
SYNGAP1-209ENST00000635885 THUMPD2Q9BTF0 503 aaKnown RBP13.23□□□□□ -0.29
SYNGAP1-209ENST00000635885 KIF16BQ96L93 1317 aa13.22□□□□□ -0.29
SYNGAP1-209ENST00000635885 VAMP4O75379 141 aa13.22□□□□□ -0.29
SYNGAP1-209ENST00000635885 DDRGK1Q96HY6 314 aa13.22□□□□□ -0.29
SYNGAP1-209ENST00000635885 PDZRN3Q9UPQ7 1066 aa13.22□□□□□ -0.29
SYNGAP1-209ENST00000635885 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
SYNGAP1-209ENST00000635885 MRPL50Q8N5N7 158 aaKnown RBP13.21□□□□□ -0.29
SYNGAP1-209ENST00000635885 DDX19BQ9UMR2 479 aa13.21□□□□□ -0.29
SYNGAP1-209ENST00000635885 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
SYNGAP1-209ENST00000635885 MBIPQ9NS73 344 aa13.2□□□□□ -0.3
SYNGAP1-209ENST00000635885 NPHP4O75161 1426 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-209ENST00000635885 SULT6B1Q6IMI4 303 aa13.19□□□□□ -0.3
SYNGAP1-209ENST00000635885 AEBP1Q8IUX7 1158 aa13.19□□□□□ -0.3
SYNGAP1-209ENST00000635885 ITPRIPQ8IWB1 547 aa13.19□□□□□ -0.3
SYNGAP1-209ENST00000635885 NGDNQ8NEJ9 315 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-209ENST00000635885 KDM4FA0A1W2PPD8 638 aa13.18□□□□□ -0.3
SYNGAP1-209ENST00000635885 KCNA6P17658 529 aa13.18□□□□□ -0.3
SYNGAP1-209ENST00000635885 HDAC1Q13547 482 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-209ENST00000635885 TSPYL6Q8N831 410 aa13.18□□□□□ -0.3
SYNGAP1-209ENST00000635885 CFAP44Q96MT7 982 aa13.18□□□□□ -0.3
SYNGAP1-209ENST00000635885 ARHGEF10O15013 1369 aa13.18□□□□□ -0.3
SYNGAP1-209ENST00000635885 FAM83GA6ND36 823 aa13.17□□□□□ -0.3
SYNGAP1-209ENST00000635885 HSP90AB2PQ58FF8 381 aa13.17□□□□□ -0.3
SYNGAP1-209ENST00000635885 ARHGAP45Q92619 1136 aa13.17□□□□□ -0.3
SYNGAP1-209ENST00000635885 SBNO1A3KN83 1393 aa13.17□□□□□ -0.3
SYNGAP1-209ENST00000635885 MAP3K19Q56UN5 1328 aa13.16□□□□□ -0.3
SYNGAP1-209ENST00000635885 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
SYNGAP1-209ENST00000635885 C8orf58Q8NAV2 365 aa13.16□□□□□ -0.3
SYNGAP1-209ENST00000635885 ZBTB40Q9NUA8 1239 aa13.16□□□□□ -0.3
SYNGAP1-209ENST00000635885 LTN1O94822 1766 aa13.15□□□□□ -0.3
SYNGAP1-209ENST00000635885 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-209ENST00000635885 FLT4P35916 1363 aa13.15□□□□□ -0.3
SYNGAP1-209ENST00000635885 SOX12O15370 315 aa13.13□□□□□ -0.31
SYNGAP1-209ENST00000635885 CHMP4BQ9H444 224 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-209ENST00000635885 CRB1P82279 1406 aa13.13□□□□□ -0.31
SYNGAP1-209ENST00000635885 ABCC4O15439 1325 aa13.13□□□□□ -0.31
SYNGAP1-209ENST00000635885 USP19O94966 1318 aa13.13□□□□□ -0.31
SYNGAP1-209ENST00000635885 CACNA1FO60840 1977 aa13.12□□□□□ -0.31
SYNGAP1-209ENST00000635885 ELL2O00472 640 aaPredicted RBP13.12□□□□□ -0.31
SYNGAP1-209ENST00000635885 CHL1O00533 1208 aa13.12□□□□□ -0.31
SYNGAP1-209ENST00000635885 AMPHP49418 695 aa13.12□□□□□ -0.31
SYNGAP1-209ENST00000635885 SMC5Q8IY18 1101 aa13.12□□□□□ -0.31
SYNGAP1-209ENST00000635885 API5Q9BZZ5 524 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-209ENST00000635885 KIF24Q5T7B8 1368 aa13.11□□□□□ -0.31
SYNGAP1-209ENST00000635885 KIAA0232Q92628 1395 aa13.11□□□□□ -0.31
SYNGAP1-209ENST00000635885 ZBTB7BO15156 539 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-209ENST00000635885 NLRP6P59044 892 aa13.11□□□□□ -0.31
SYNGAP1-209ENST00000635885 IGSF1Q8N6C5 1336 aa13.11□□□□□ -0.31
SYNGAP1-209ENST00000635885 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
SYNGAP1-209ENST00000635885 KDRP35968 1356 aa13.1□□□□□ -0.31
SYNGAP1-209ENST00000635885 SEC24BO95487 1268 aa13.1□□□□□ -0.31
SYNGAP1-209ENST00000635885 MCM10Q7L590 875 aa13.1□□□□□ -0.31
SYNGAP1-209ENST00000635885 EYA1Q99502 592 aa13.1□□□□□ -0.31
SYNGAP1-209ENST00000635885 NWD1Q149M9 1564 aa13.1□□□□□ -0.31
SYNGAP1-209ENST00000635885 NBR1Q14596 966 aa13.09□□□□□ -0.31
SYNGAP1-209ENST00000635885 PHF8Q9UPP1 1060 aa13.09□□□□□ -0.31
SYNGAP1-209ENST00000635885 RGPD2P0DJD1 1756 aa13.09□□□□□ -0.31
SYNGAP1-209ENST00000635885 ADGRL3Q9HAR2 1447 aa13.08□□□□□ -0.32
SYNGAP1-209ENST00000635885 HOXC9P31274 260 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms