RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 NUDT16Q96DE0 195 aaKnown RBP15.86■□□□□ 0.13
PTPN11-205ENST00000635625 POLKQ9UBT6 870 aa15.86■□□□□ 0.13
PTPN11-205ENST00000635625 ARHGAP23Q9P227 1491 aa15.86■□□□□ 0.13
PTPN11-205ENST00000635625 KIF16BQ96L93 1317 aa15.86■□□□□ 0.13
PTPN11-205ENST00000635625 NALCNQ8IZF0 1738 aa15.85■□□□□ 0.13
PTPN11-205ENST00000635625 RSPH6AQ9H0K4 717 aa15.85■□□□□ 0.13
PTPN11-205ENST00000635625 PAK3O75914 559 aaPredicted RBP15.85■□□□□ 0.13
PTPN11-205ENST00000635625 RIPK4P57078 832 aa15.85■□□□□ 0.13
PTPN11-205ENST00000635625 MVPQ14764 893 aaKnown RBP15.85■□□□□ 0.13
PTPN11-205ENST00000635625 ALDH1L2Q3SY69 923 aa15.85■□□□□ 0.13
PTPN11-205ENST00000635625 C8orf34Q49A92 452 aa15.85■□□□□ 0.13
PTPN11-205ENST00000635625 SETD1BQ9UPS6 1966 aaKnown RBP15.85■□□□□ 0.13
PTPN11-205ENST00000635625 LMOD3Q0VAK6 560 aa15.84■□□□□ 0.13
PTPN11-205ENST00000635625 COG3Q96JB2 828 aa15.84■□□□□ 0.13
PTPN11-205ENST00000635625 RWDD1Q9H446 243 aaPredicted RBP15.84■□□□□ 0.13
PTPN11-205ENST00000635625 FBXO3Q9UK99 471 aa15.84■□□□□ 0.13
PTPN11-205ENST00000635625 PTCH1Q13635 1447 aa15.84■□□□□ 0.13
PTPN11-205ENST00000635625 BRPF1P55201 1214 aaPredicted RBP15.83■□□□□ 0.12
PTPN11-205ENST00000635625 NPM2Q86SE8 214 aaKnown RBP15.83■□□□□ 0.12
PTPN11-205ENST00000635625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.83■□□□□ 0.12
PTPN11-205ENST00000635625 FTSJ3Q8IY81 847 aaKnown RBP15.83■□□□□ 0.12
PTPN11-205ENST00000635625 DZIP1LQ8IYY4 767 aaKnown RBP15.83■□□□□ 0.12
PTPN11-205ENST00000635625 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.83■□□□□ 0.12
PTPN11-205ENST00000635625 IPO8O15397 1037 aaKnown RBP15.82■□□□□ 0.12
PTPN11-205ENST00000635625 NFE2L2Q16236 605 aa15.82■□□□□ 0.12
PTPN11-205ENST00000635625 TXNDC2Q86VQ3 553 aa15.82■□□□□ 0.12
PTPN11-205ENST00000635625 SMC4Q9NTJ3 1288 aa15.82■□□□□ 0.12
PTPN11-205ENST00000635625 IGHDP01880 384 aa15.82■□□□□ 0.12
PTPN11-205ENST00000635625 EXOSC9Q06265 439 aaKnown RBP15.82■□□□□ 0.12
PTPN11-205ENST00000635625 DDX19BQ9UMR2 479 aa15.82■□□□□ 0.12
PTPN11-205ENST00000635625 ROBO2Q9HCK4 1378 aa15.81■□□□□ 0.12
PTPN11-205ENST00000635625 CHMP4BQ9H444 224 aaKnown RBP15.81■□□□□ 0.12
PTPN11-205ENST00000635625 PRKAR2BP31323 418 aa15.8■□□□□ 0.12
PTPN11-205ENST00000635625 IL13P35225 146 aa15.8■□□□□ 0.12
PTPN11-205ENST00000635625 PPM1GO15355 546 aaPredicted RBP15.8■□□□□ 0.12
PTPN11-205ENST00000635625 RLBP1P12271 317 aa15.8■□□□□ 0.12
PTPN11-205ENST00000635625 ATF7IPQ6VMQ6 1270 aa15.8■□□□□ 0.12
PTPN11-205ENST00000635625 EID1Q9Y6B2 187 aa15.8■□□□□ 0.12
PTPN11-205ENST00000635625 PLEKHG3A1L390 1219 aa15.79■□□□□ 0.12
PTPN11-205ENST00000635625 RGS3P49796 1198 aa15.79■□□□□ 0.12
PTPN11-205ENST00000635625 TSR2Q969E8 191 aaKnown RBP15.79■□□□□ 0.12
PTPN11-205ENST00000635625 IFT57Q9NWB7 429 aa15.79■□□□□ 0.12
PTPN11-205ENST00000635625 USP35Q9P2H5 1018 aa15.79■□□□□ 0.12
PTPN11-205ENST00000635625 OVOS2A0A0J9YW53 1432 aa15.78■□□□□ 0.12
PTPN11-205ENST00000635625 OVOS2Q6IE36 1432 aa15.78■□□□□ 0.12
PTPN11-205ENST00000635625 GNAI1P63096 354 aa15.78■□□□□ 0.12
PTPN11-205ENST00000635625 DLG5Q8TDM6 1919 aa15.78■□□□□ 0.12
PTPN11-205ENST00000635625 HDAC1Q13547 482 aaPredicted RBP15.77■□□□□ 0.12
PTPN11-205ENST00000635625 NME9Q86XW9 330 aa15.77■□□□□ 0.12
PTPN11-205ENST00000635625 SSH1Q8WYL5 1049 aa15.77■□□□□ 0.12
PTPN11-205ENST00000635625 XRN1Q8IZH2 1706 aaKnown RBP15.77■□□□□ 0.11
PTPN11-205ENST00000635625 RTL5Q5HYW3 569 aaPredicted RBP15.77■□□□□ 0.11
PTPN11-205ENST00000635625 CHRDL2Q6WN34 429 aa15.77■□□□□ 0.11
PTPN11-205ENST00000635625 SKAP1Q86WV1 359 aa15.77■□□□□ 0.11
PTPN11-205ENST00000635625 USP6P35125 1406 aa15.77■□□□□ 0.11
PTPN11-205ENST00000635625 TRIM27P14373 513 aa15.76■□□□□ 0.11
PTPN11-205ENST00000635625 ARHGAP45Q92619 1136 aa15.76■□□□□ 0.11
PTPN11-205ENST00000635625 BCL2L13Q9BXK5 485 aa15.76■□□□□ 0.11
PTPN11-205ENST00000635625 PCDHB15Q9Y5E8 787 aa15.76■□□□□ 0.11
PTPN11-205ENST00000635625 PRR36Q9H6K5 1346 aa15.76■□□□□ 0.11
PTPN11-205ENST00000635625 RGPD1P0DJD0 1748 aa15.76■□□□□ 0.11
PTPN11-205ENST00000635625 USP31Q70CQ4 1352 aa15.75■□□□□ 0.11
PTPN11-205ENST00000635625 TTC21AQ8NDW8 1320 aa15.75■□□□□ 0.11
PTPN11-205ENST00000635625 FMN2Q9NZ56 1722 aa15.75■□□□□ 0.11
PTPN11-205ENST00000635625 DAXXQ9UER7 740 aaPredicted RBP15.75■□□□□ 0.11
PTPN11-205ENST00000635625 TBX22Q9Y458 520 aa15.75■□□□□ 0.11
PTPN11-205ENST00000635625 EMILIN1Q9Y6C2 1016 aa15.75■□□□□ 0.11
PTPN11-205ENST00000635625 USP54Q70EL1 1684 aa15.75■□□□□ 0.11
PTPN11-205ENST00000635625 PIK3R4Q99570 1358 aa15.75■□□□□ 0.11
PTPN11-205ENST00000635625 TTC21BQ7Z4L5 1316 aa15.75■□□□□ 0.11
PTPN11-205ENST00000635625 HAP1P54257 671 aaPredicted RBP15.75■□□□□ 0.11
PTPN11-205ENST00000635625 SSH2Q76I76 1423 aa15.73■□□□□ 0.11
PTPN11-205ENST00000635625 ANKARQ7Z5J8 1434 aa15.73■□□□□ 0.11
PTPN11-205ENST00000635625 STRCQ7RTU9 1775 aa15.73■□□□□ 0.11
PTPN11-205ENST00000635625 ZNF853P0CG23 659 aa15.73■□□□□ 0.11
PTPN11-205ENST00000635625 PRR29P0C7W0 189 aa15.72■□□□□ 0.11
PTPN11-205ENST00000635625 PTPRUQ92729 1446 aa15.72■□□□□ 0.11
PTPN11-205ENST00000635625 LTKP29376 864 aa15.72■□□□□ 0.11
PTPN11-205ENST00000635625 THEMISQ8N1K5 641 aaPredicted RBP15.72■□□□□ 0.11
PTPN11-205ENST00000635625 NOB1Q9ULX3 412 aaKnown RBP15.72■□□□□ 0.11
PTPN11-205ENST00000635625 ACEP12821 1306 aa15.71■□□□□ 0.11
PTPN11-205ENST00000635625 ITPRIPQ8IWB1 547 aa15.71■□□□□ 0.11
PTPN11-205ENST00000635625 PDZRN3Q9UPQ7 1066 aa15.71■□□□□ 0.11
PTPN11-205ENST00000635625 TNNQ9UQP3 1299 aa15.71■□□□□ 0.11
PTPN11-205ENST00000635625 KIF24Q5T7B8 1368 aa15.71■□□□□ 0.1
PTPN11-205ENST00000635625 CFAP44Q96MT7 982 aa15.7■□□□□ 0.1
PTPN11-205ENST00000635625 UPF2Q9HAU5 1272 aaKnown RBP15.7■□□□□ 0.1
PTPN11-205ENST00000635625 PHACTR3Q96KR7 559 aa15.7■□□□□ 0.1
PTPN11-205ENST00000635625 PEAK1Q9H792 1746 aa15.69■□□□□ 0.1
PTPN11-205ENST00000635625 ARHGEF10O15013 1369 aa15.69■□□□□ 0.1
PTPN11-205ENST00000635625 HMOX1P09601 288 aa15.69■□□□□ 0.1
PTPN11-205ENST00000635625 ZBTB40Q9NUA8 1239 aa15.69■□□□□ 0.1
PTPN11-205ENST00000635625 CEP170BQ9Y4F5 1589 aaPredicted RBP15.68■□□□□ 0.1
PTPN11-205ENST00000635625 SMC5Q8IY18 1101 aa15.68■□□□□ 0.1
PTPN11-205ENST00000635625 TMEM57Q8N5G2 664 aa15.67■□□□□ 0.1
PTPN11-205ENST00000635625 ZNF142P52746 1687 aaPredicted RBP15.67■□□□□ 0.1
PTPN11-205ENST00000635625 VAMP4O75379 141 aa15.67■□□□□ 0.1
PTPN11-205ENST00000635625 NBR1Q14596 966 aa15.67■□□□□ 0.1
PTPN11-205ENST00000635625 ZRANB1Q9UGI0 708 aa15.67■□□□□ 0.1
PTPN11-205ENST00000635625 NCKAP5LQ9HCH0 1330 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms