RNA–Protein interactions for RNA: ENST00000635564.1

LINC01141-204, Transcript of long intergenic non-protein coding RNA 1141, humanhuman

TSL 5 BASIC

Gene LINC01141, Length 1,008 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01141-204ENST00000635564 KIF7Q2M1P5 1343 aa9.5□□□□□ -0.89
LINC01141-204ENST00000635564 PNPLA6Q8IY17 1366 aa9.5□□□□□ -0.89
LINC01141-204ENST00000635564 CPSF1Q10570 1443 aaKnown RBP9.49□□□□□ -0.89
LINC01141-204ENST00000635564 NLRP6P59044 892 aa9.49□□□□□ -0.89
LINC01141-204ENST00000635564 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.49□□□□□ -0.89
LINC01141-204ENST00000635564 TTC21BQ7Z4L5 1316 aa9.49□□□□□ -0.89
LINC01141-204ENST00000635564 A0A1W2PP64 1363 aa9.49□□□□□ -0.89
LINC01141-204ENST00000635564 C11orf95C9JLR9 678 aaPredicted RBP9.48□□□□□ -0.89
LINC01141-204ENST00000635564 CCDC7Q96M83 1385 aa9.48□□□□□ -0.89
LINC01141-204ENST00000635564 EDC4Q6P2E9 1401 aaKnown RBP9.48□□□□□ -0.89
LINC01141-204ENST00000635564 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
LINC01141-204ENST00000635564 KCNH5Q8NCM2 988 aa9.47□□□□□ -0.89
LINC01141-204ENST00000635564 KIF12Q96FN5 646 aa9.47□□□□□ -0.89
LINC01141-204ENST00000635564 SGIP1Q9BQI5 828 aa9.47□□□□□ -0.89
LINC01141-204ENST00000635564 PANK3Q9H999 370 aa9.47□□□□□ -0.89
LINC01141-204ENST00000635564 KNSTRNQ9Y448 316 aa9.47□□□□□ -0.89
LINC01141-204ENST00000635564 ECM2O94769 699 aaPredicted RBP9.46□□□□□ -0.9
LINC01141-204ENST00000635564 PYGBP11216 843 aa9.46□□□□□ -0.9
LINC01141-204ENST00000635564 COG3Q96JB2 828 aa9.46□□□□□ -0.9
LINC01141-204ENST00000635564 CGNL1Q0VF96 1302 aa9.46□□□□□ -0.9
LINC01141-204ENST00000635564 WASHC2AQ641Q2 1341 aa9.46□□□□□ -0.9
LINC01141-204ENST00000635564 SHPRHQ149N8 1683 aa9.45□□□□□ -0.9
LINC01141-204ENST00000635564 ADAMTS2O95450 1211 aa9.45□□□□□ -0.9
LINC01141-204ENST00000635564 CABLES1Q8TDN4 633 aa9.45□□□□□ -0.9
LINC01141-204ENST00000635564 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
LINC01141-204ENST00000635564 CD163L1Q9NR16 1453 aa9.45□□□□□ -0.9
LINC01141-204ENST00000635564 MMRN1Q13201 1228 aa9.44□□□□□ -0.9
LINC01141-204ENST00000635564 NME9Q86XW9 330 aa9.44□□□□□ -0.9
LINC01141-204ENST00000635564 NGLY1Q96IV0 654 aa9.44□□□□□ -0.9
LINC01141-204ENST00000635564 PHF12Q96QT6 1004 aa9.44□□□□□ -0.9
LINC01141-204ENST00000635564 NSD3Q9BZ95 1437 aa9.44□□□□□ -0.9
LINC01141-204ENST00000635564 AKAP12Q02952 1782 aa9.44□□□□□ -0.9
LINC01141-204ENST00000635564 TRPM3Q9HCF6 1732 aaPredicted RBP9.43□□□□□ -0.9
LINC01141-204ENST00000635564 COL22A1Q8NFW1 1626 aaPredicted RBP9.43□□□□□ -0.9
LINC01141-204ENST00000635564 USP31Q70CQ4 1352 aa9.43□□□□□ -0.9
LINC01141-204ENST00000635564 ZNF316A6NFI3 1004 aaPredicted RBP9.43□□□□□ -0.9
LINC01141-204ENST00000635564 GCP02774 474 aa9.43□□□□□ -0.9
LINC01141-204ENST00000635564 C8orf37Q96NL8 207 aa9.43□□□□□ -0.9
LINC01141-204ENST00000635564 CARD14Q9BXL6 1004 aa9.43□□□□□ -0.9
LINC01141-204ENST00000635564 MON2Q7Z3U7 1717 aa9.42□□□□□ -0.9
LINC01141-204ENST00000635564 USP19O94966 1318 aa9.42□□□□□ -0.9
LINC01141-204ENST00000635564 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
LINC01141-204ENST00000635564 FYB1O15117 783 aa9.42□□□□□ -0.9
LINC01141-204ENST00000635564 SOX12O15370 315 aa9.42□□□□□ -0.9
LINC01141-204ENST00000635564 MAP3K13O43283 966 aa9.42□□□□□ -0.9
LINC01141-204ENST00000635564 GGNBP2Q9H3C7 697 aa9.42□□□□□ -0.9
LINC01141-204ENST00000635564 PRDM11Q9NQV5 511 aa9.42□□□□□ -0.9
LINC01141-204ENST00000635564 ALS2Q96Q42 1657 aa9.42□□□□□ -0.9
LINC01141-204ENST00000635564 NSD2O96028 1365 aa9.41□□□□□ -0.9
LINC01141-204ENST00000635564 ZC3H6P61129 1189 aaKnown RBP9.41□□□□□ -0.9
LINC01141-204ENST00000635564 ZNF772Q68DY9 489 aaPredicted RBP9.41□□□□□ -0.9
LINC01141-204ENST00000635564 RNF25Q96BH1 459 aaPredicted RBP9.41□□□□□ -0.9
LINC01141-204ENST00000635564 MED1Q15648 1581 aaPredicted RBP9.41□□□□□ -0.9
LINC01141-204ENST00000635564 MYOM1P52179 1685 aa9.4□□□□□ -0.9
LINC01141-204ENST00000635564 ZNF467Q7Z7K2 595 aaPredicted RBP9.4□□□□□ -0.9
LINC01141-204ENST00000635564 MORC1Q86VD1 984 aa9.4□□□□□ -0.9
LINC01141-204ENST00000635564 NRKQ7Z2Y5 1582 aa9.39□□□□□ -0.91
LINC01141-204ENST00000635564 FAM83GA6ND36 823 aa9.39□□□□□ -0.91
LINC01141-204ENST00000635564 EVA1CP58658 441 aa9.39□□□□□ -0.91
LINC01141-204ENST00000635564 DDX10Q13206 875 aaKnown RBP9.39□□□□□ -0.91
LINC01141-204ENST00000635564 USP21Q9UK80 565 aa9.39□□□□□ -0.91
LINC01141-204ENST00000635564 LRP6O75581 1613 aa9.38□□□□□ -0.91
LINC01141-204ENST00000635564 CPDO75976 1380 aa9.38□□□□□ -0.91
LINC01141-204ENST00000635564 KIAA0232Q92628 1395 aa9.38□□□□□ -0.91
LINC01141-204ENST00000635564 AFF2P51816 1311 aa9.38□□□□□ -0.91
LINC01141-204ENST00000635564 RGL2O15211 777 aa9.38□□□□□ -0.91
LINC01141-204ENST00000635564 AMPHP49418 695 aa9.38□□□□□ -0.91
LINC01141-204ENST00000635564 FNBP4Q8N3X1 1017 aaPredicted RBP9.38□□□□□ -0.91
LINC01141-204ENST00000635564 DAXXQ9UER7 740 aaPredicted RBP9.38□□□□□ -0.91
LINC01141-204ENST00000635564 PCDHB13Q9Y5F0 798 aa9.38□□□□□ -0.91
LINC01141-204ENST00000635564 PIK3C2AO00443 1686 aa9.38□□□□□ -0.91
LINC01141-204ENST00000635564 OVOS2A0A0J9YW53 1432 aa9.38□□□□□ -0.91
LINC01141-204ENST00000635564 OVOS2Q6IE36 1432 aa9.38□□□□□ -0.91
LINC01141-204ENST00000635564 SLIT3O75094 1523 aa9.37□□□□□ -0.91
LINC01141-204ENST00000635564 PER1O15534 1290 aaPredicted RBP9.37□□□□□ -0.91
LINC01141-204ENST00000635564 CHRNA2Q15822 529 aa9.37□□□□□ -0.91
LINC01141-204ENST00000635564 CC2D1BQ5T0F9 858 aaKnown RBP9.37□□□□□ -0.91
LINC01141-204ENST00000635564 ARHGEF25Q86VW2 580 aa9.37□□□□□ -0.91
LINC01141-204ENST00000635564 UNC5CLQ8IV45 518 aa9.37□□□□□ -0.91
LINC01141-204ENST00000635564 BTG4Q9NY30 223 aa9.37□□□□□ -0.91
LINC01141-204ENST00000635564 TRPC5Q9UL62 973 aaPredicted RBP9.37□□□□□ -0.91
LINC01141-204ENST00000635564 CCDC9Q9Y3X0 531 aaKnown RBP9.37□□□□□ -0.91
LINC01141-204ENST00000635564 AATKQ6ZMQ8 1374 aa9.37□□□□□ -0.91
LINC01141-204ENST00000635564 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
LINC01141-204ENST00000635564 CSB-PGBD3P0DP91 1061 aa9.36□□□□□ -0.91
LINC01141-204ENST00000635564 TNNT2P45379 298 aaPredicted RBP9.36□□□□□ -0.91
LINC01141-204ENST00000635564 CNGB1Q14028 1251 aaPredicted RBP9.36□□□□□ -0.91
LINC01141-204ENST00000635564 IFNL1Q8IU54 200 aa9.36□□□□□ -0.91
LINC01141-204ENST00000635564 MS4A3Q96HJ5 214 aa9.36□□□□□ -0.91
LINC01141-204ENST00000635564 NPC1L1Q9UHC9 1359 aa9.36□□□□□ -0.91
LINC01141-204ENST00000635564 PPM1GO15355 546 aaPredicted RBP9.35□□□□□ -0.91
LINC01141-204ENST00000635564 QTRT2Q9H974 415 aaKnown RBP9.35□□□□□ -0.91
LINC01141-204ENST00000635564 STRN4Q9NRL3 753 aa9.35□□□□□ -0.91
LINC01141-204ENST00000635564 PHRF1Q9P1Y6 1649 aaKnown RBP9.34□□□□□ -0.91
LINC01141-204ENST00000635564 KIF20BQ96Q89 1820 aa9.34□□□□□ -0.91
LINC01141-204ENST00000635564 GALR2O43603 387 aaPredicted RBP9.34□□□□□ -0.91
LINC01141-204ENST00000635564 RXRBP28702 533 aa9.34□□□□□ -0.91
LINC01141-204ENST00000635564 IP6K1Q92551 441 aa9.34□□□□□ -0.91
LINC01141-204ENST00000635564 COL14A1Q05707 1796 aaKnown RBP9.34□□□□□ -0.91
LINC01141-204ENST00000635564 KIF24Q5T7B8 1368 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms