RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.23□□□□□ -0.29
LINC01560-202ENST00000624822 ZNF772Q68DY9 489 aaPredicted RBP13.23□□□□□ -0.29
LINC01560-202ENST00000624822 ZBTB7CA1YPR0 619 aa13.22□□□□□ -0.29
LINC01560-202ENST00000624822 ZEB1P37275 1124 aaPredicted RBP13.22□□□□□ -0.29
LINC01560-202ENST00000624822 SOX12O15370 315 aa13.21□□□□□ -0.29
LINC01560-202ENST00000624822 ZC3H6P61129 1189 aaKnown RBP13.21□□□□□ -0.29
LINC01560-202ENST00000624822 NME9Q86XW9 330 aa13.21□□□□□ -0.29
LINC01560-202ENST00000624822 RGS17Q9UGC6 210 aaPredicted RBP13.21□□□□□ -0.29
LINC01560-202ENST00000624822 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
LINC01560-202ENST00000624822 USP21Q9UK80 565 aa13.21□□□□□ -0.29
LINC01560-202ENST00000624822 SLIT3O75094 1523 aa13.21□□□□□ -0.29
LINC01560-202ENST00000624822 RGPD5Q99666 1765 aa13.21□□□□□ -0.29
LINC01560-202ENST00000624822 USP19O94966 1318 aa13.2□□□□□ -0.3
LINC01560-202ENST00000624822 NRAPQ86VF7 1730 aa13.2□□□□□ -0.3
LINC01560-202ENST00000624822 C11orf95C9JLR9 678 aaPredicted RBP13.2□□□□□ -0.3
LINC01560-202ENST00000624822 PRDM11Q9NQV5 511 aa13.2□□□□□ -0.3
LINC01560-202ENST00000624822 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
LINC01560-202ENST00000624822 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
LINC01560-202ENST00000624822 GCP02774 474 aa13.19□□□□□ -0.3
LINC01560-202ENST00000624822 NSD3Q9BZ95 1437 aa13.19□□□□□ -0.3
LINC01560-202ENST00000624822 ANKRD26Q9UPS8 1709 aa13.19□□□□□ -0.3
LINC01560-202ENST00000624822 CHRNA2Q15822 529 aa13.18□□□□□ -0.3
LINC01560-202ENST00000624822 POTEAQ6S8J7 498 aa13.18□□□□□ -0.3
LINC01560-202ENST00000624822 SLIT2O94813 1529 aa13.18□□□□□ -0.3
LINC01560-202ENST00000624822 FAM83GA6ND36 823 aa13.17□□□□□ -0.3
LINC01560-202ENST00000624822 FNBP4Q8N3X1 1017 aaPredicted RBP13.17□□□□□ -0.3
LINC01560-202ENST00000624822 KCNH5Q8NCM2 988 aa13.17□□□□□ -0.3
LINC01560-202ENST00000624822 COG3Q96JB2 828 aa13.17□□□□□ -0.3
LINC01560-202ENST00000624822 QTRT2Q9H974 415 aaKnown RBP13.17□□□□□ -0.3
LINC01560-202ENST00000624822 USP31Q70CQ4 1352 aa13.17□□□□□ -0.3
LINC01560-202ENST00000624822 OVOS2A0A0J9YW53 1432 aa13.16□□□□□ -0.3
LINC01560-202ENST00000624822 OVOS2Q6IE36 1432 aa13.16□□□□□ -0.3
LINC01560-202ENST00000624822 LMO7Q8WWI1 1683 aa13.16□□□□□ -0.3
LINC01560-202ENST00000624822 LHX8Q68G74 356 aa13.16□□□□□ -0.3
LINC01560-202ENST00000624822 ZNF579Q8NAF0 562 aaKnown RBP13.16□□□□□ -0.3
LINC01560-202ENST00000624822 BTG4Q9NY30 223 aa13.16□□□□□ -0.3
LINC01560-202ENST00000624822 CCDC9Q9Y3X0 531 aaKnown RBP13.16□□□□□ -0.3
LINC01560-202ENST00000624822 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
LINC01560-202ENST00000624822 NFAT5O94916 1531 aa13.15□□□□□ -0.3
LINC01560-202ENST00000624822 UNC5CLQ8IV45 518 aa13.15□□□□□ -0.3
LINC01560-202ENST00000624822 GGNBP2Q9H3C7 697 aa13.15□□□□□ -0.3
LINC01560-202ENST00000624822 PANK3Q9H999 370 aa13.15□□□□□ -0.3
LINC01560-202ENST00000624822 TRPC5Q9UL62 973 aaPredicted RBP13.15□□□□□ -0.3
LINC01560-202ENST00000624822 CCDC7Q96M83 1385 aa13.15□□□□□ -0.3
LINC01560-202ENST00000624822 MAP2P11137 1827 aaKnown RBP13.14□□□□□ -0.31
LINC01560-202ENST00000624822 RXRBP28702 533 aa13.14□□□□□ -0.31
LINC01560-202ENST00000624822 MNX1P50219 401 aaPredicted RBP13.14□□□□□ -0.31
LINC01560-202ENST00000624822 ILDR2Q71H61 639 aa13.14□□□□□ -0.31
LINC01560-202ENST00000624822 CARD14Q9BXL6 1004 aa13.14□□□□□ -0.31
LINC01560-202ENST00000624822 STRN4Q9NRL3 753 aa13.14□□□□□ -0.31
LINC01560-202ENST00000624822 CPDO75976 1380 aa13.14□□□□□ -0.31
LINC01560-202ENST00000624822 COL18A1P39060 1754 aa13.14□□□□□ -0.31
LINC01560-202ENST00000624822 WASHC2AQ641Q2 1341 aa13.13□□□□□ -0.31
LINC01560-202ENST00000624822 ATRNO75882 1429 aa13.13□□□□□ -0.31
LINC01560-202ENST00000624822 FYB1O15117 783 aa13.13□□□□□ -0.31
LINC01560-202ENST00000624822 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
LINC01560-202ENST00000624822 CAMTA1Q9Y6Y1 1673 aa13.12□□□□□ -0.31
LINC01560-202ENST00000624822 EVA1CP58658 441 aa13.12□□□□□ -0.31
LINC01560-202ENST00000624822 RBM6P78332 1123 aaKnown RBP13.12□□□□□ -0.31
LINC01560-202ENST00000624822 GLI3P10071 1580 aa13.11□□□□□ -0.31
LINC01560-202ENST00000624822 KNSTRNQ9Y448 316 aa13.11□□□□□ -0.31
LINC01560-202ENST00000624822 ARHGEF25Q86VW2 580 aa13.1□□□□□ -0.31
LINC01560-202ENST00000624822 GJD4Q96KN9 370 aaPredicted RBP13.1□□□□□ -0.31
LINC01560-202ENST00000624822 AATKQ6ZMQ8 1374 aa13.09□□□□□ -0.31
LINC01560-202ENST00000624822 ABCC6O95255 1503 aa13.09□□□□□ -0.31
LINC01560-202ENST00000624822 BRWD3Q6RI45 1802 aa13.09□□□□□ -0.31
LINC01560-202ENST00000624822 A0A0G2JS52 829 aa13.09□□□□□ -0.31
LINC01560-202ENST00000624822 CLCN6P51797 869 aa13.09□□□□□ -0.31
LINC01560-202ENST00000624822 MYT1Q01538 1121 aa13.09□□□□□ -0.31
LINC01560-202ENST00000624822 VPS72Q15906 364 aa13.09□□□□□ -0.31
LINC01560-202ENST00000624822 PROM2Q8N271 834 aa13.09□□□□□ -0.31
LINC01560-202ENST00000624822 COL5A2P05997 1499 aaPredicted RBP13.09□□□□□ -0.31
LINC01560-202ENST00000624822 WNK3Q9BYP7 1800 aa13.09□□□□□ -0.31
LINC01560-202ENST00000624822 RGPD2P0DJD1 1756 aa13.08□□□□□ -0.32
LINC01560-202ENST00000624822 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
LINC01560-202ENST00000624822 FBLN1P23142 703 aa13.08□□□□□ -0.32
LINC01560-202ENST00000624822 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
LINC01560-202ENST00000624822 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.32
LINC01560-202ENST00000624822 RGS12O14924 1447 aa13.07□□□□□ -0.32
LINC01560-202ENST00000624822 CSB-PGBD3P0DP91 1061 aa13.07□□□□□ -0.32
LINC01560-202ENST00000624822 AMPHP49418 695 aa13.07□□□□□ -0.32
LINC01560-202ENST00000624822 CNGB1Q14028 1251 aaPredicted RBP13.07□□□□□ -0.32
LINC01560-202ENST00000624822 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
LINC01560-202ENST00000624822 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
LINC01560-202ENST00000624822 CDK12Q9NYV4 1490 aaPredicted RBP13.07□□□□□ -0.32
LINC01560-202ENST00000624822 NSD2O96028 1365 aa13.07□□□□□ -0.32
LINC01560-202ENST00000624822 PEAK1Q9H792 1746 aa13.06□□□□□ -0.32
LINC01560-202ENST00000624822 TNNT2P45379 298 aaPredicted RBP13.06□□□□□ -0.32
LINC01560-202ENST00000624822 LARP1Q6PKG0 1096 aaKnown RBP13.06□□□□□ -0.32
LINC01560-202ENST00000624822 TOM1L2Q6ZVM7 507 aa13.06□□□□□ -0.32
LINC01560-202ENST00000624822 AXIN2Q9Y2T1 843 aa13.06□□□□□ -0.32
LINC01560-202ENST00000624822 CRB1P82279 1406 aa13.05□□□□□ -0.32
LINC01560-202ENST00000624822 MORC1Q86VD1 984 aa13.05□□□□□ -0.32
LINC01560-202ENST00000624822 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
LINC01560-202ENST00000624822 MAP3K19Q56UN5 1328 aa13.05□□□□□ -0.32
LINC01560-202ENST00000624822 SPATA31A5Q5VU36 1347 aa13.05□□□□□ -0.32
LINC01560-202ENST00000624822 SPATA31A7Q8IWB4 1347 aa13.05□□□□□ -0.32
LINC01560-202ENST00000624822 PPM1GO15355 546 aaPredicted RBP13.04□□□□□ -0.32
LINC01560-202ENST00000624822 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
LINC01560-202ENST00000624822 SPATA31A1Q5TZJ5 1347 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms