RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
C3orf56-201ENST00000624688 NUTM2GQ5VZR2 741 aa17.16■□□□□ 0.34
C3orf56-201ENST00000624688 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
C3orf56-201ENST00000624688 PROSER2Q86WR7 435 aaPredicted RBP17.16■□□□□ 0.34
C3orf56-201ENST00000624688 AEBP1Q8IUX7 1158 aa17.16■□□□□ 0.34
C3orf56-201ENST00000624688 FLT4P35916 1363 aa17.15■□□□□ 0.34
C3orf56-201ENST00000624688 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
C3orf56-201ENST00000624688 CT47B1P0C2W7 299 aaPredicted RBP17.14■□□□□ 0.33
C3orf56-201ENST00000624688 EXOSC9Q06265 439 aaKnown RBP17.14■□□□□ 0.33
C3orf56-201ENST00000624688 SULT6B1Q6IMI4 303 aa17.14■□□□□ 0.33
C3orf56-201ENST00000624688 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
C3orf56-201ENST00000624688 ARHGEF10O15013 1369 aa17.13■□□□□ 0.33
C3orf56-201ENST00000624688 PDE3AQ14432 1141 aa17.13■□□□□ 0.33
C3orf56-201ENST00000624688 ORAI2Q96SN7 254 aa17.13■□□□□ 0.33
C3orf56-201ENST00000624688 KIF24Q5T7B8 1368 aa17.11■□□□□ 0.33
C3orf56-201ENST00000624688 KDM4FA0A1W2PPD8 638 aa17.11■□□□□ 0.33
C3orf56-201ENST00000624688 AMPHP49418 695 aa17.11■□□□□ 0.33
C3orf56-201ENST00000624688 HSPA2P54652 639 aa17.11■□□□□ 0.33
C3orf56-201ENST00000624688 THUMPD2Q9BTF0 503 aaKnown RBP17.11■□□□□ 0.33
C3orf56-201ENST00000624688 NFAT5O94916 1531 aa17.11■□□□□ 0.33
C3orf56-201ENST00000624688 PSME1Q06323 249 aa17.1■□□□□ 0.33
C3orf56-201ENST00000624688 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
C3orf56-201ENST00000624688 C1orf167Q5SNV9 1468 aa17.1■□□□□ 0.33
C3orf56-201ENST00000624688 C19orf44Q9H6X5 657 aa17.1■□□□□ 0.33
C3orf56-201ENST00000624688 LTN1O94822 1766 aa17.09■□□□□ 0.33
C3orf56-201ENST00000624688 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
C3orf56-201ENST00000624688 HOXC9P31274 260 aa17.09■□□□□ 0.33
C3orf56-201ENST00000624688 LMOD3Q0VAK6 560 aa17.09■□□□□ 0.33
C3orf56-201ENST00000624688 PANK1Q8TE04 598 aa17.09■□□□□ 0.33
C3orf56-201ENST00000624688 FRAT1Q92837 279 aaPredicted RBP17.09■□□□□ 0.33
C3orf56-201ENST00000624688 TRPM3Q9HCF6 1732 aaPredicted RBP17.09■□□□□ 0.33
C3orf56-201ENST00000624688 KIF1AQ12756 1690 aa17.09■□□□□ 0.33
C3orf56-201ENST00000624688 KDRP35968 1356 aa17.09■□□□□ 0.33
C3orf56-201ENST00000624688 IGSF1Q8N6C5 1336 aa17.08■□□□□ 0.33
C3orf56-201ENST00000624688 CALD1Q05682 793 aaKnown RBP17.08■□□□□ 0.32
C3orf56-201ENST00000624688 RBM19Q9Y4C8 960 aaKnown RBP17.08■□□□□ 0.32
C3orf56-201ENST00000624688 TMEM94Q12767 1356 aa17.08■□□□□ 0.32
C3orf56-201ENST00000624688 KDM2BQ8NHM5 1336 aa17.08■□□□□ 0.32
C3orf56-201ENST00000624688 FAM83GA6ND36 823 aa17.07■□□□□ 0.32
C3orf56-201ENST00000624688 CANXP27824 592 aaKnown RBP17.07■□□□□ 0.32
C3orf56-201ENST00000624688 EYA1Q99502 592 aa17.07■□□□□ 0.32
C3orf56-201ENST00000624688 IFT57Q9NWB7 429 aa17.07■□□□□ 0.32
C3orf56-201ENST00000624688 TNNQ9UQP3 1299 aa17.07■□□□□ 0.32
C3orf56-201ENST00000624688 LMTK3Q96Q04 1460 aa17.07■□□□□ 0.32
C3orf56-201ENST00000624688 NCOA3Q9Y6Q9 1424 aa17.07■□□□□ 0.32
C3orf56-201ENST00000624688 FOXO3O43524 673 aa17.07■□□□□ 0.32
C3orf56-201ENST00000624688 GNAI1P63096 354 aa17.06■□□□□ 0.32
C3orf56-201ENST00000624688 SSH1Q8WYL5 1049 aa17.06■□□□□ 0.32
C3orf56-201ENST00000624688 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
C3orf56-201ENST00000624688 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
C3orf56-201ENST00000624688 MST1RQ04912 1400 aa17.06■□□□□ 0.32
C3orf56-201ENST00000624688 STRCQ7RTU9 1775 aa17.05■□□□□ 0.32
C3orf56-201ENST00000624688 RLBP1P12271 317 aa17.05■□□□□ 0.32
C3orf56-201ENST00000624688 DCTN1Q14203 1278 aa17.05■□□□□ 0.32
C3orf56-201ENST00000624688 COG6Q9Y2V7 657 aa17.05■□□□□ 0.32
C3orf56-201ENST00000624688 DCCP43146 1447 aa17.05■□□□□ 0.32
C3orf56-201ENST00000624688 XPCQ01831 940 aaPredicted RBP17.04■□□□□ 0.32
C3orf56-201ENST00000624688 MBIPQ9NS73 344 aa17.04■□□□□ 0.32
C3orf56-201ENST00000624688 PHRF1Q9P1Y6 1649 aaKnown RBP17.04■□□□□ 0.32
C3orf56-201ENST00000624688 SLIT3O75094 1523 aa17.04■□□□□ 0.32
C3orf56-201ENST00000624688 CFAP44Q96MT7 982 aa17.04■□□□□ 0.32
C3orf56-201ENST00000624688 SMC4Q9NTJ3 1288 aa17.04■□□□□ 0.32
C3orf56-201ENST00000624688 ZKSCAN2Q63HK3 967 aa17.02■□□□□ 0.32
C3orf56-201ENST00000624688 KRT28Q7Z3Y7 464 aa17.02■□□□□ 0.32
C3orf56-201ENST00000624688 XIRP1Q702N8 1843 aaKnown RBP17.02■□□□□ 0.32
C3orf56-201ENST00000624688 MTHFSDQ2M296 383 aaKnown RBP17.01■□□□□ 0.31
C3orf56-201ENST00000624688 ALDH1L2Q3SY69 923 aa17.01■□□□□ 0.31
C3orf56-201ENST00000624688 CENPQQ7L2Z9 268 aaPredicted RBP17.01■□□□□ 0.31
C3orf56-201ENST00000624688 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
C3orf56-201ENST00000624688 IP6K1Q92551 441 aa17.01■□□□□ 0.31
C3orf56-201ENST00000624688 ALS2Q96Q42 1657 aa17.01■□□□□ 0.31
C3orf56-201ENST00000624688 VAMP4O75379 141 aa17.01■□□□□ 0.31
C3orf56-201ENST00000624688 ATF3P18847 181 aa17.01■□□□□ 0.31
C3orf56-201ENST00000624688 TSPYL6Q8N831 410 aa17.01■□□□□ 0.31
C3orf56-201ENST00000624688 CLUAP1Q96AJ1 413 aa17■□□□□ 0.31
C3orf56-201ENST00000624688 ZNF428Q96B54 188 aa17■□□□□ 0.31
C3orf56-201ENST00000624688 USP19O94966 1318 aa17■□□□□ 0.31
C3orf56-201ENST00000624688 CRB1P82279 1406 aa17■□□□□ 0.31
C3orf56-201ENST00000624688 TRIM27P14373 513 aa16.99■□□□□ 0.31
C3orf56-201ENST00000624688 MCM10Q7L590 875 aa16.99■□□□□ 0.31
C3orf56-201ENST00000624688 GCP02774 474 aa16.99■□□□□ 0.31
C3orf56-201ENST00000624688 BRPF1P55201 1214 aaPredicted RBP16.99■□□□□ 0.31
C3orf56-201ENST00000624688 LTV1Q96GA3 475 aaPredicted RBP16.99■□□□□ 0.31
C3orf56-201ENST00000624688 NOB1Q9ULX3 412 aaKnown RBP16.99■□□□□ 0.31
C3orf56-201ENST00000624688 DZIP1LQ8IYY4 767 aaKnown RBP16.98■□□□□ 0.31
C3orf56-201ENST00000624688 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
C3orf56-201ENST00000624688 CHL1O00533 1208 aa16.97■□□□□ 0.31
C3orf56-201ENST00000624688 MVPQ14764 893 aaKnown RBP16.97■□□□□ 0.31
C3orf56-201ENST00000624688 ATF7IPQ6VMQ6 1270 aa16.97■□□□□ 0.31
C3orf56-201ENST00000624688 KIF16BQ96L93 1317 aa16.97■□□□□ 0.31
C3orf56-201ENST00000624688 TCERG1O14776 1098 aaKnown RBP16.96■□□□□ 0.31
C3orf56-201ENST00000624688 IGHDP01880 384 aa16.96■□□□□ 0.31
C3orf56-201ENST00000624688 AAMPQ13685 434 aa16.96■□□□□ 0.31
C3orf56-201ENST00000624688 ARHGEF25Q86VW2 580 aa16.96■□□□□ 0.31
C3orf56-201ENST00000624688 SKAP1Q86WV1 359 aa16.96■□□□□ 0.31
C3orf56-201ENST00000624688 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.31
C3orf56-201ENST00000624688 RGPD2P0DJD1 1756 aa16.96■□□□□ 0.31
C3orf56-201ENST00000624688 LRRC37A3O60309 1634 aa16.96■□□□□ 0.31
C3orf56-201ENST00000624688 MED1Q15648 1581 aaPredicted RBP16.96■□□□□ 0.31
C3orf56-201ENST00000624688 MS4A1P11836 297 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms