RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 LMTK3Q96Q04 1460 aa13.76□□□□□ -0.21
ATRX-216ENST00000624403 ADGRL3Q9HAR2 1447 aa13.76□□□□□ -0.21
ATRX-216ENST00000624403 CHRM1P11229 460 aaPredicted RBP13.76□□□□□ -0.21
ATRX-216ENST00000624403 CFAP53Q96M91 514 aa13.76□□□□□ -0.21
ATRX-216ENST00000624403 TMEM106CQ9BVX2 250 aa13.76□□□□□ -0.21
ATRX-216ENST00000624403 USP6P35125 1406 aa13.75□□□□□ -0.21
ATRX-216ENST00000624403 TTC21BQ7Z4L5 1316 aa13.75□□□□□ -0.21
ATRX-216ENST00000624403 NRKQ7Z2Y5 1582 aa13.75□□□□□ -0.21
ATRX-216ENST00000624403 PMFBP1Q8TBY8 1022 aa13.74□□□□□ -0.21
ATRX-216ENST00000624403 TRIM35Q9UPQ4 493 aa13.74□□□□□ -0.21
ATRX-216ENST00000624403 SHPRHQ149N8 1683 aa13.74□□□□□ -0.21
ATRX-216ENST00000624403 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
ATRX-216ENST00000624403 PROSER2Q86WR7 435 aaPredicted RBP13.73□□□□□ -0.21
ATRX-216ENST00000624403 SMG6Q86US8 1419 aaKnown RBP13.73□□□□□ -0.21
ATRX-216ENST00000624403 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
ATRX-216ENST00000624403 COG3Q96JB2 828 aa13.72□□□□□ -0.21
ATRX-216ENST00000624403 SALL2Q9Y467 1007 aaPredicted RBP13.72□□□□□ -0.21
ATRX-216ENST00000624403 RGPD8O14715 1765 aaPredicted RBP13.72□□□□□ -0.21
ATRX-216ENST00000624403 COL3A1P02461 1466 aaPredicted RBP13.72□□□□□ -0.21
ATRX-216ENST00000624403 C14orf37Q86TY3 774 aa13.71□□□□□ -0.21
ATRX-216ENST00000624403 CCDC146Q8IYE0 955 aa13.71□□□□□ -0.21
ATRX-216ENST00000624403 FBLN1P23142 703 aa13.7□□□□□ -0.22
ATRX-216ENST00000624403 POLKQ9UBT6 870 aa13.7□□□□□ -0.22
ATRX-216ENST00000624403 AATKQ6ZMQ8 1374 aa13.7□□□□□ -0.22
ATRX-216ENST00000624403 PNPLA6Q8IY17 1366 aa13.7□□□□□ -0.22
ATRX-216ENST00000624403 TTC21AQ8NDW8 1320 aa13.69□□□□□ -0.22
ATRX-216ENST00000624403 ZNF467Q7Z7K2 595 aaPredicted RBP13.69□□□□□ -0.22
ATRX-216ENST00000624403 PHF8Q9UPP1 1060 aa13.69□□□□□ -0.22
ATRX-216ENST00000624403 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
ATRX-216ENST00000624403 OVOS2A0A0J9YW53 1432 aa13.69□□□□□ -0.22
ATRX-216ENST00000624403 OVOS2Q6IE36 1432 aa13.69□□□□□ -0.22
ATRX-216ENST00000624403 POTEFA5A3E0 1075 aa13.68□□□□□ -0.22
ATRX-216ENST00000624403 PDE3BQ13370 1112 aa13.68□□□□□ -0.22
ATRX-216ENST00000624403 STRCP1A6NGW2 1772 aa13.68□□□□□ -0.22
ATRX-216ENST00000624403 APAF1O14727 1248 aa13.67□□□□□ -0.22
ATRX-216ENST00000624403 STRCQ7RTU9 1775 aa13.67□□□□□ -0.22
ATRX-216ENST00000624403 PPM1GO15355 546 aaPredicted RBP13.66□□□□□ -0.22
ATRX-216ENST00000624403 DIAPH1O60610 1272 aaKnown RBP13.66□□□□□ -0.22
ATRX-216ENST00000624403 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
ATRX-216ENST00000624403 U2AF1L5P0DN76 240 aaPredicted RBP13.66□□□□□ -0.22
ATRX-216ENST00000624403 U2AF1Q01081 240 aaKnown RBP eCLIP13.66□□□□□ -0.22
ATRX-216ENST00000624403 PLSCR2Q9NRY7 297 aa13.66□□□□□ -0.22
ATRX-216ENST00000624403 SUPT16HQ9Y5B9 1047 aaKnown RBP13.66□□□□□ -0.22
ATRX-216ENST00000624403 EMILIN1Q9Y6C2 1016 aa13.66□□□□□ -0.22
ATRX-216ENST00000624403 TMEM94Q12767 1356 aa13.66□□□□□ -0.22
ATRX-216ENST00000624403 USP31Q70CQ4 1352 aa13.66□□□□□ -0.22
ATRX-216ENST00000624403 ESCO1Q5FWF5 840 aa13.65□□□□□ -0.22
ATRX-216ENST00000624403 RUNDC1Q96C34 613 aa13.65□□□□□ -0.22
ATRX-216ENST00000624403 C19orf44Q9H6X5 657 aa13.65□□□□□ -0.22
ATRX-216ENST00000624403 COLQQ9Y215 455 aaPredicted RBP13.65□□□□□ -0.22
ATRX-216ENST00000624403 CDK12Q9NYV4 1490 aaPredicted RBP13.65□□□□□ -0.22
ATRX-216ENST00000624403 ZNF521Q96K83 1311 aa13.64□□□□□ -0.23
ATRX-216ENST00000624403 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
ATRX-216ENST00000624403 IQSEC2Q5JU85 1478 aa13.64□□□□□ -0.23
ATRX-216ENST00000624403 U2SURPO15042 1029 aaKnown RBP13.64□□□□□ -0.23
ATRX-216ENST00000624403 RRS1Q15050 365 aaKnown RBP13.64□□□□□ -0.23
ATRX-216ENST00000624403 OTUD5Q96G74 571 aa13.64□□□□□ -0.23
ATRX-216ENST00000624403 CDCA7LQ96GN5 454 aa13.64□□□□□ -0.23
ATRX-216ENST00000624403 PIK3C2AO00443 1686 aa13.63□□□□□ -0.23
ATRX-216ENST00000624403 NEFLP07196 543 aa13.63□□□□□ -0.23
ATRX-216ENST00000624403 ORAI2Q96SN7 254 aa13.63□□□□□ -0.23
ATRX-216ENST00000624403 C1orf167Q5SNV9 1468 aa13.62□□□□□ -0.23
ATRX-216ENST00000624403 SEC24BO95487 1268 aa13.62□□□□□ -0.23
ATRX-216ENST00000624403 NGEFQ8N5V2 710 aa13.62□□□□□ -0.23
ATRX-216ENST00000624403 MAP2P11137 1827 aaKnown RBP13.62□□□□□ -0.23
ATRX-216ENST00000624403 ATF3P18847 181 aa13.61□□□□□ -0.23
ATRX-216ENST00000624403 IL13P35225 146 aa13.61□□□□□ -0.23
ATRX-216ENST00000624403 PSME1Q06323 249 aa13.61□□□□□ -0.23
ATRX-216ENST00000624403 IER5LQ5T953 404 aa13.61□□□□□ -0.23
ATRX-216ENST00000624403 TCP11L2Q8N4U5 519 aa13.61□□□□□ -0.23
ATRX-216ENST00000624403 DCCP43146 1447 aa13.61□□□□□ -0.23
ATRX-216ENST00000624403 NLRP6P59044 892 aa13.6□□□□□ -0.23
ATRX-216ENST00000624403 MST1RQ04912 1400 aa13.6□□□□□ -0.23
ATRX-216ENST00000624403 PLEKHF1Q96S99 279 aa13.6□□□□□ -0.23
ATRX-216ENST00000624403 SOX12O15370 315 aa13.59□□□□□ -0.23
ATRX-216ENST00000624403 PSEN1P49768 467 aa13.59□□□□□ -0.23
ATRX-216ENST00000624403 GOLGA2Q08379 1002 aa13.59□□□□□ -0.23
ATRX-216ENST00000624403 NUTM2GQ5VZR2 741 aa13.59□□□□□ -0.23
ATRX-216ENST00000624403 ABTB2Q8N961 1025 aa13.59□□□□□ -0.23
ATRX-216ENST00000624403 RRP7AQ9Y3A4 280 aaKnown RBP13.59□□□□□ -0.23
ATRX-216ENST00000624403 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
ATRX-216ENST00000624403 ZNF335Q9H4Z2 1342 aaPredicted RBP13.59□□□□□ -0.23
ATRX-216ENST00000624403 LRRC7Q96NW7 1537 aa13.59□□□□□ -0.23
ATRX-216ENST00000624403 KIF1AQ12756 1690 aa13.58□□□□□ -0.24
ATRX-216ENST00000624403 PEAK1Q9H792 1746 aa13.58□□□□□ -0.24
ATRX-216ENST00000624403 MARF1Q9Y4F3 1742 aaKnown RBP13.58□□□□□ -0.24
ATRX-216ENST00000624403 MAP3K19Q56UN5 1328 aa13.58□□□□□ -0.24
ATRX-216ENST00000624403 MSH6P52701 1360 aa13.58□□□□□ -0.24
ATRX-216ENST00000624403 FOXO3O43524 673 aa13.57□□□□□ -0.24
ATRX-216ENST00000624403 FCHSD2O94868 740 aa13.57□□□□□ -0.24
ATRX-216ENST00000624403 SLFN5Q08AF3 891 aa13.57□□□□□ -0.24
ATRX-216ENST00000624403 WWC1Q8IX03 1113 aa13.57□□□□□ -0.24
ATRX-216ENST00000624403 RSPH6AQ9H0K4 717 aa13.57□□□□□ -0.24
ATRX-216ENST00000624403 PNNQ9H307 717 aaKnown RBP13.57□□□□□ -0.24
ATRX-216ENST00000624403 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
ATRX-216ENST00000624403 EIF4A2Q14240 407 aaKnown RBP13.56□□□□□ -0.24
ATRX-216ENST00000624403 NEUROD2Q15784 382 aa13.56□□□□□ -0.24
ATRX-216ENST00000624403 DUSP27Q5VZP5 1158 aa13.56□□□□□ -0.24
ATRX-216ENST00000624403 CADPS2Q86UW7 1296 aa13.56□□□□□ -0.24
ATRX-216ENST00000624403 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms