RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 MVPQ14764 893 aaKnown RBP6.77□□□□□ -1.33
ERCC6-213ENST00000624341 TWISTNBQ3B726 338 aaPredicted RBP6.77□□□□□ -1.33
ERCC6-213ENST00000624341 UQCRHLA0A096LP55 91 aa6.77□□□□□ -1.33
ERCC6-213ENST00000624341 UQCRHP07919 91 aa6.77□□□□□ -1.33
ERCC6-213ENST00000624341 HSP90AB4PQ58FF6 505 aa6.77□□□□□ -1.33
ERCC6-213ENST00000624341 ATF7IPQ6VMQ6 1270 aa6.77□□□□□ -1.33
ERCC6-213ENST00000624341 DMRT2Q9Y5R5 561 aa6.77□□□□□ -1.33
ERCC6-213ENST00000624341 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.77□□□□□ -1.33
ERCC6-213ENST00000624341 PATL2C9JE40 543 aaKnown RBP6.76□□□□□ -1.33
ERCC6-213ENST00000624341 RRP9O43818 475 aaKnown RBP6.76□□□□□ -1.33
ERCC6-213ENST00000624341 GTF2E1P29083 439 aaPredicted RBP6.76□□□□□ -1.33
ERCC6-213ENST00000624341 TRDNQ13061 729 aa6.76□□□□□ -1.33
ERCC6-213ENST00000624341 PDILTQ8N807 584 aa6.76□□□□□ -1.33
ERCC6-213ENST00000624341 CEP89Q96ST8 783 aa6.76□□□□□ -1.33
ERCC6-213ENST00000624341 MCM2P49736 904 aa6.76□□□□□ -1.33
ERCC6-213ENST00000624341 CEBPZQ03701 1054 aaKnown RBP6.76□□□□□ -1.33
ERCC6-213ENST00000624341 AIMP1Q12904 312 aaKnown RBP6.76□□□□□ -1.33
ERCC6-213ENST00000624341 VPS53Q5VIR6 699 aa6.76□□□□□ -1.33
ERCC6-213ENST00000624341 CHD1LQ86WJ1 897 aa6.76□□□□□ -1.33
ERCC6-213ENST00000624341 STAC3Q96MF2 364 aa6.76□□□□□ -1.33
ERCC6-213ENST00000624341 NEUROD6Q96NK8 337 aa6.76□□□□□ -1.33
ERCC6-213ENST00000624341 KDM4AO75164 1064 aa6.76□□□□□ -1.33
ERCC6-213ENST00000624341 AGLP35573 1532 aa6.76□□□□□ -1.33
ERCC6-213ENST00000624341 LRRFIP1Q32MZ4 808 aaKnown RBP6.76□□□□□ -1.33
ERCC6-213ENST00000624341 ANKRD20A12PQ8NF67 263 aa6.76□□□□□ -1.33
ERCC6-213ENST00000624341 MLH3Q9UHC1 1453 aa6.76□□□□□ -1.33
ERCC6-213ENST00000624341 LMTK3Q96Q04 1460 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 LETM1O95202 739 aaPredicted RBP6.75□□□□□ -1.33
ERCC6-213ENST00000624341 SLFN5Q08AF3 891 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 NFXL1Q6ZNB6 911 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 CLASRPQ8N2M8 674 aaKnown RBP6.75□□□□□ -1.33
ERCC6-213ENST00000624341 CWC22Q9HCG8 908 aaKnown RBP6.75□□□□□ -1.33
ERCC6-213ENST00000624341 DDX58O95786 925 aaKnown RBP6.75□□□□□ -1.33
ERCC6-213ENST00000624341 HSP90B2PQ58FF3 399 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 TTC5Q8N0Z6 440 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 CNTROBQ8N137 903 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 ABCC1P33527 1531 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 CDC42BPBQ9Y5S2 1711 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 FSD1Q9BTV5 496 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 NAT10Q9H0A0 1025 aaKnown RBP6.75□□□□□ -1.33
ERCC6-213ENST00000624341 HOOK1Q9UJC3 728 aaKnown RBP6.75□□□□□ -1.33
ERCC6-213ENST00000624341 SMC2O95347 1197 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 GNAI3P08754 354 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 TTLL5Q6EMB2 1281 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 YEATS2Q9ULM3 1422 aa6.75□□□□□ -1.33
ERCC6-213ENST00000624341 KINO60870 393 aaKnown RBP6.74□□□□□ -1.33
ERCC6-213ENST00000624341 ZSCAN30Q86W11 494 aa6.74□□□□□ -1.33
ERCC6-213ENST00000624341 CIZ1Q9ULV3 898 aaPredicted RBP6.74□□□□□ -1.33
ERCC6-213ENST00000624341 PSMA5P28066 241 aa6.74□□□□□ -1.33
ERCC6-213ENST00000624341 HFM1A2PYH4 1435 aa6.74□□□□□ -1.33
ERCC6-213ENST00000624341 MROH2AA6NES4 1674 aa6.74□□□□□ -1.33
ERCC6-213ENST00000624341 TCOF1Q13428 1488 aaKnown RBP6.74□□□□□ -1.33
ERCC6-213ENST00000624341 WDR63Q8IWG1 891 aa6.74□□□□□ -1.33
ERCC6-213ENST00000624341 SLC4A2P04920 1241 aa6.74□□□□□ -1.33
ERCC6-213ENST00000624341 WASHC4Q2M389 1173 aa6.74□□□□□ -1.33
ERCC6-213ENST00000624341 RALYLQ86SE5 291 aaKnown RBP6.74□□□□□ -1.33
ERCC6-213ENST00000624341 WWC1Q8IX03 1113 aa6.74□□□□□ -1.33
ERCC6-213ENST00000624341 UHRF1BP1Q6BDS2 1440 aa6.74□□□□□ -1.33
ERCC6-213ENST00000624341 DIP2CQ9Y2E4 1556 aa6.74□□□□□ -1.33
ERCC6-213ENST00000624341 SYCE3A1L190 88 aa6.74□□□□□ -1.33
ERCC6-213ENST00000624341 NUTM2GQ5VZR2 741 aa6.74□□□□□ -1.33
ERCC6-213ENST00000624341 ATP2B1P20020 1258 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 PDCP20941 246 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 AFAP1Q8N556 730 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 TBC1D2Q9BYX2 928 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 CCDC66A2RUB6 948 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 MAP4K4O95819 1239 aaPredicted RBP6.73□□□□□ -1.33
ERCC6-213ENST00000624341 CCDC192P0DO97 292 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 RIC3Q7Z5B4 369 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 WDR33Q9C0J8 1336 aaKnown RBP6.73□□□□□ -1.33
ERCC6-213ENST00000624341 KIAA1107Q9UPP5 1409 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 SAFBQ15424 915 aaKnown RBP eCLIP6.73□□□□□ -1.33
ERCC6-213ENST00000624341 OLFM4Q6UX06 510 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 CCDC112Q8NEF3 446 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 GNAI2P04899 355 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 STK3Q13188 491 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 TMEM57Q8N5G2 664 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 CDC42BPAQ5VT25 1732 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 NINLQ9Y2I6 1382 aa6.73□□□□□ -1.33
ERCC6-213ENST00000624341 ZNF428Q96B54 188 aa6.72□□□□□ -1.33
ERCC6-213ENST00000624341 ABCA6Q8N139 1617 aa6.72□□□□□ -1.33
ERCC6-213ENST00000624341 NAP1L1P55209 391 aaKnown RBP6.72□□□□□ -1.33
ERCC6-213ENST00000624341 SKIDA1Q1XH10 827 aa6.72□□□□□ -1.33
ERCC6-213ENST00000624341 RUFY1Q96T51 708 aa6.72□□□□□ -1.33
ERCC6-213ENST00000624341 TNMDQ9H2S6 317 aa6.72□□□□□ -1.33
ERCC6-213ENST00000624341 PPP6R1Q9UPN7 881 aa6.72□□□□□ -1.33
ERCC6-213ENST00000624341 CCDC30Q5VVM6 783 aa6.72□□□□□ -1.33
ERCC6-213ENST00000624341 ACBD3Q9H3P7 528 aa6.72□□□□□ -1.33
ERCC6-213ENST00000624341 XPCQ01831 940 aaPredicted RBP6.72□□□□□ -1.33
ERCC6-213ENST00000624341 NOM1Q5C9Z4 860 aaKnown RBP6.72□□□□□ -1.33
ERCC6-213ENST00000624341 DNAJC2Q99543 621 aaKnown RBP6.72□□□□□ -1.33
ERCC6-213ENST00000624341 LARP1BQ659C4 914 aaKnown RBP6.71□□□□□ -1.33
ERCC6-213ENST00000624341 CCDC47Q96A33 483 aaKnown RBP6.71□□□□□ -1.33
ERCC6-213ENST00000624341 PRDM10Q9NQV6 1147 aa6.71□□□□□ -1.33
ERCC6-213ENST00000624341 CYP46A1Q9Y6A2 500 aa6.71□□□□□ -1.33
ERCC6-213ENST00000624341 ADGBQ8N7X0 1667 aa6.71□□□□□ -1.33
ERCC6-213ENST00000624341 LRRCC1Q9C099 1032 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 FAM135AQ9P2D6 1515 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 ARHGEF5Q12774 1597 aa6.71□□□□□ -1.34
ERCC6-213ENST00000624341 KRT85P78386 507 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms