RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 U2AF1Q01081 240 aaKnown RBP eCLIP9.27□□□□□ -0.93
CBWD3-219ENST00000622817 NGEFQ8N5V2 710 aa9.27□□□□□ -0.93
CBWD3-219ENST00000622817 RRS1Q15050 365 aaKnown RBP9.26□□□□□ -0.93
CBWD3-219ENST00000622817 KRT28Q7Z3Y7 464 aa9.26□□□□□ -0.93
CBWD3-219ENST00000622817 RUNDC1Q96C34 613 aa9.26□□□□□ -0.93
CBWD3-219ENST00000622817 USP54Q70EL1 1684 aa9.26□□□□□ -0.93
CBWD3-219ENST00000622817 U2SURPO15042 1029 aaKnown RBP9.25□□□□□ -0.93
CBWD3-219ENST00000622817 PDE3BQ13370 1112 aa9.25□□□□□ -0.93
CBWD3-219ENST00000622817 CCDC146Q8IYE0 955 aa9.25□□□□□ -0.93
CBWD3-219ENST00000622817 NUTM2GQ5VZR2 741 aa9.25□□□□□ -0.93
CBWD3-219ENST00000622817 PNNQ9H307 717 aaKnown RBP9.25□□□□□ -0.93
CBWD3-219ENST00000622817 SLAIN2Q9P270 581 aa9.25□□□□□ -0.93
CBWD3-219ENST00000622817 NPHP3Q7Z494 1330 aa9.25□□□□□ -0.93
CBWD3-219ENST00000622817 SENP3-EIF4A1A0A087X0R7 540 aa9.24□□□□□ -0.93
CBWD3-219ENST00000622817 XPCQ01831 940 aaPredicted RBP9.24□□□□□ -0.93
CBWD3-219ENST00000622817 SALL2Q9Y467 1007 aaPredicted RBP9.24□□□□□ -0.93
CBWD3-219ENST00000622817 MAP3K19Q56UN5 1328 aa9.24□□□□□ -0.93
CBWD3-219ENST00000622817 SBNO1A3KN83 1393 aa9.24□□□□□ -0.93
CBWD3-219ENST00000622817 APAF1O14727 1248 aa9.23□□□□□ -0.93
CBWD3-219ENST00000622817 SOX12O15370 315 aa9.23□□□□□ -0.93
CBWD3-219ENST00000622817 IL13P35225 146 aa9.23□□□□□ -0.93
CBWD3-219ENST00000622817 KCNH5Q8NCM2 988 aa9.23□□□□□ -0.93
CBWD3-219ENST00000622817 KIF24Q5T7B8 1368 aa9.23□□□□□ -0.93
CBWD3-219ENST00000622817 TRPM3Q9HCF6 1732 aaPredicted RBP9.23□□□□□ -0.93
CBWD3-219ENST00000622817 FCHSD2O94868 740 aa9.23□□□□□ -0.93
CBWD3-219ENST00000622817 AMPHP49418 695 aa9.23□□□□□ -0.93
CBWD3-219ENST00000622817 CHADLQ6NUI6 762 aa9.23□□□□□ -0.93
CBWD3-219ENST00000622817 BRINP3Q76B58 766 aa9.23□□□□□ -0.93
CBWD3-219ENST00000622817 PROM2Q8N271 834 aa9.23□□□□□ -0.93
CBWD3-219ENST00000622817 FLT4P35916 1363 aa9.22□□□□□ -0.93
CBWD3-219ENST00000622817 HAX1O00165 279 aa9.22□□□□□ -0.93
CBWD3-219ENST00000622817 LMOD2Q6P5Q4 547 aa9.22□□□□□ -0.93
CBWD3-219ENST00000622817 SP7Q8TDD2 431 aaPredicted RBP9.22□□□□□ -0.93
CBWD3-219ENST00000622817 MARF1Q9Y4F3 1742 aaKnown RBP9.22□□□□□ -0.93
CBWD3-219ENST00000622817 TCP11L2Q8N4U5 519 aa9.21□□□□□ -0.93
CBWD3-219ENST00000622817 NEFMP07197 916 aa9.21□□□□□ -0.94
CBWD3-219ENST00000622817 EIF4A2Q14240 407 aaKnown RBP9.21□□□□□ -0.94
CBWD3-219ENST00000622817 HSP90AB2PQ58FF8 381 aa9.21□□□□□ -0.94
CBWD3-219ENST00000622817 PLEKHF1Q96S99 279 aa9.21□□□□□ -0.94
CBWD3-219ENST00000622817 USP19O94966 1318 aa9.21□□□□□ -0.94
CBWD3-219ENST00000622817 ZNF521Q96K83 1311 aa9.21□□□□□ -0.94
CBWD3-219ENST00000622817 MAPK8IP3Q9UPT6 1336 aa9.21□□□□□ -0.94
CBWD3-219ENST00000622817 RTL1A6NKG5 1358 aa9.21□□□□□ -0.94
CBWD3-219ENST00000622817 PXDNQ92626 1479 aa9.2□□□□□ -0.94
CBWD3-219ENST00000622817 PEAK1Q9H792 1746 aa9.2□□□□□ -0.94
CBWD3-219ENST00000622817 DDX17Q92841 729 aaKnown RBP9.2□□□□□ -0.94
CBWD3-219ENST00000622817 GTF3C3Q9Y5Q9 886 aa9.2□□□□□ -0.94
CBWD3-219ENST00000622817 IQSEC2Q5JU85 1478 aa9.2□□□□□ -0.94
CBWD3-219ENST00000622817 SLIT3O75094 1523 aa9.2□□□□□ -0.94
CBWD3-219ENST00000622817 NFAT5O94916 1531 aa9.2□□□□□ -0.94
CBWD3-219ENST00000622817 LTBP4Q8N2S1 1624 aa9.2□□□□□ -0.94
CBWD3-219ENST00000622817 GCP02774 474 aa9.19□□□□□ -0.94
CBWD3-219ENST00000622817 GOLGA2Q08379 1002 aa9.19□□□□□ -0.94
CBWD3-219ENST00000622817 CCDC27Q2M243 656 aa9.19□□□□□ -0.94
CBWD3-219ENST00000622817 RSPH6AQ9H0K4 717 aa9.19□□□□□ -0.94
CBWD3-219ENST00000622817 ARHGEF10O15013 1369 aa9.19□□□□□ -0.94
CBWD3-219ENST00000622817 TNS3Q68CZ2 1445 aa9.19□□□□□ -0.94
CBWD3-219ENST00000622817 ALS2Q96Q42 1657 aa9.19□□□□□ -0.94
CBWD3-219ENST00000622817 SPATA31A3Q5VYP0 1347 aa9.19□□□□□ -0.94
CBWD3-219ENST00000622817 HOXC9P31274 260 aa9.19□□□□□ -0.94
CBWD3-219ENST00000622817 PRKAR2BP31323 418 aa9.19□□□□□ -0.94
CBWD3-219ENST00000622817 IP6K1Q92551 441 aa9.19□□□□□ -0.94
CBWD3-219ENST00000622817 SOS2Q07890 1332 aaPredicted RBP9.18□□□□□ -0.94
CBWD3-219ENST00000622817 HMOX1P09601 288 aa9.18□□□□□ -0.94
CBWD3-219ENST00000622817 EVX2Q03828 476 aa9.18□□□□□ -0.94
CBWD3-219ENST00000622817 WWC1Q8IX03 1113 aa9.18□□□□□ -0.94
CBWD3-219ENST00000622817 CDCA7LQ96GN5 454 aa9.18□□□□□ -0.94
CBWD3-219ENST00000622817 RRP7AQ9Y3A4 280 aaKnown RBP9.18□□□□□ -0.94
CBWD3-219ENST00000622817 TMPOP42166 694 aaKnown RBP9.17□□□□□ -0.94
CBWD3-219ENST00000622817 NEUROD2Q15784 382 aa9.17□□□□□ -0.94
CBWD3-219ENST00000622817 ARHGEF25Q86VW2 580 aa9.17□□□□□ -0.94
CBWD3-219ENST00000622817 WDR63Q8IWG1 891 aa9.17□□□□□ -0.94
CBWD3-219ENST00000622817 E9PSI1 815 aa9.17□□□□□ -0.94
CBWD3-219ENST00000622817 SLFN5Q08AF3 891 aa9.17□□□□□ -0.94
CBWD3-219ENST00000622817 SULT6B1Q6IMI4 303 aa9.17□□□□□ -0.94
CBWD3-219ENST00000622817 PHRF1Q9P1Y6 1649 aaKnown RBP9.16□□□□□ -0.94
CBWD3-219ENST00000622817 C19orf67A6NJJ6 358 aa9.16□□□□□ -0.94
CBWD3-219ENST00000622817 NEFLP07196 543 aa9.16□□□□□ -0.94
CBWD3-219ENST00000622817 SUPT16HQ9Y5B9 1047 aaKnown RBP9.16□□□□□ -0.94
CBWD3-219ENST00000622817 LTN1O94822 1766 aa9.16□□□□□ -0.94
CBWD3-219ENST00000622817 RGPD1P0DJD0 1748 aa9.16□□□□□ -0.94
CBWD3-219ENST00000622817 MED1Q15648 1581 aaPredicted RBP9.15□□□□□ -0.94
CBWD3-219ENST00000622817 IGSF1Q8N6C5 1336 aa9.15□□□□□ -0.94
CBWD3-219ENST00000622817 ZBTB7CA1YPR0 619 aa9.15□□□□□ -0.94
CBWD3-219ENST00000622817 PLEKHG5O94827 1062 aa9.15□□□□□ -0.94
CBWD3-219ENST00000622817 RIPK4P57078 832 aa9.15□□□□□ -0.94
CBWD3-219ENST00000622817 NFE2L2Q16236 605 aa9.15□□□□□ -0.94
CBWD3-219ENST00000622817 TRMT2AQ8IZ69 625 aaKnown RBP9.15□□□□□ -0.94
CBWD3-219ENST00000622817 PHACTR3Q96KR7 559 aa9.15□□□□□ -0.94
CBWD3-219ENST00000622817 EYA1Q99502 592 aa9.15□□□□□ -0.94
CBWD3-219ENST00000622817 DUSP27Q5VZP5 1158 aa9.15□□□□□ -0.95
CBWD3-219ENST00000622817 AEBP1Q8IUX7 1158 aa9.15□□□□□ -0.95
CBWD3-219ENST00000622817 KDRP35968 1356 aa9.14□□□□□ -0.95
CBWD3-219ENST00000622817 NHSL1Q5SYE7 1610 aa9.14□□□□□ -0.95
CBWD3-219ENST00000622817 LTV1Q96GA3 475 aaPredicted RBP9.14□□□□□ -0.95
CBWD3-219ENST00000622817 TRIM35Q9UPQ4 493 aa9.14□□□□□ -0.95
CBWD3-219ENST00000622817 ZC3H6P61129 1189 aaKnown RBP9.13□□□□□ -0.95
CBWD3-219ENST00000622817 LMOD3Q0VAK6 560 aa9.13□□□□□ -0.95
CBWD3-219ENST00000622817 MYH16Q9H6N6 1097 aa9.13□□□□□ -0.95
CBWD3-219ENST00000622817 RCAN3Q9UKA8 241 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms