RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 ZKSCAN2Q63HK3 967 aa17.96■□□□□ 0.47
EPB42-210ENST00000622454 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
EPB42-210ENST00000622454 RLBP1P12271 317 aa17.96■□□□□ 0.47
EPB42-210ENST00000622454 SKAP1Q86WV1 359 aa17.96■□□□□ 0.47
EPB42-210ENST00000622454 NGDNQ8NEJ9 315 aaKnown RBP17.96■□□□□ 0.47
EPB42-210ENST00000622454 SMC4Q9NTJ3 1288 aa17.96■□□□□ 0.47
EPB42-210ENST00000622454 FMN2Q9NZ56 1722 aa17.96■□□□□ 0.47
EPB42-210ENST00000622454 ANP32AP39687 249 aaKnown RBP17.95■□□□□ 0.46
EPB42-210ENST00000622454 RBM33Q96EV2 1170 aaKnown RBP17.95■□□□□ 0.46
EPB42-210ENST00000622454 ANP32EQ9BTT0 268 aa17.94■□□□□ 0.46
EPB42-210ENST00000622454 PEAK1Q9H792 1746 aa17.94■□□□□ 0.46
EPB42-210ENST00000622454 LMOD3Q0VAK6 560 aa17.94■□□□□ 0.46
EPB42-210ENST00000622454 SSH1Q8WYL5 1049 aa17.94■□□□□ 0.46
EPB42-210ENST00000622454 TNNQ9UQP3 1299 aa17.94■□□□□ 0.46
EPB42-210ENST00000622454 EIF4A2Q14240 407 aaKnown RBP17.93■□□□□ 0.46
EPB42-210ENST00000622454 IGHDP01880 384 aa17.92■□□□□ 0.46
EPB42-210ENST00000622454 DZIP1LQ8IYY4 767 aaKnown RBP17.92■□□□□ 0.46
EPB42-210ENST00000622454 FTSJ3Q8IY81 847 aaKnown RBP17.92■□□□□ 0.46
EPB42-210ENST00000622454 PIK3C2AO00443 1686 aa17.91■□□□□ 0.46
EPB42-210ENST00000622454 GNAI1P63096 354 aa17.91■□□□□ 0.46
EPB42-210ENST00000622454 MVPQ14764 893 aaKnown RBP17.91■□□□□ 0.46
EPB42-210ENST00000622454 ZNF428Q96B54 188 aa17.91■□□□□ 0.46
EPB42-210ENST00000622454 RGPD1P0DJD0 1748 aa17.91■□□□□ 0.46
EPB42-210ENST00000622454 ALDH1L2Q3SY69 923 aa17.91■□□□□ 0.46
EPB42-210ENST00000622454 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
EPB42-210ENST00000622454 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
EPB42-210ENST00000622454 KIF16BQ96L93 1317 aa17.9■□□□□ 0.46
EPB42-210ENST00000622454 TRIM27P14373 513 aa17.89■□□□□ 0.45
EPB42-210ENST00000622454 HSP90AB2PQ58FF8 381 aa17.89■□□□□ 0.45
EPB42-210ENST00000622454 SULT6B1Q6IMI4 303 aa17.89■□□□□ 0.45
EPB42-210ENST00000622454 ATF7IPQ6VMQ6 1270 aa17.89■□□□□ 0.45
EPB42-210ENST00000622454 THUMPD2Q9BTF0 503 aaKnown RBP17.89■□□□□ 0.45
EPB42-210ENST00000622454 ZNF853P0CG23 659 aa17.88■□□□□ 0.45
EPB42-210ENST00000622454 IPO8O15397 1037 aaKnown RBP17.88■□□□□ 0.45
EPB42-210ENST00000622454 ERICH6Q7L0X2 663 aa17.88■□□□□ 0.45
EPB42-210ENST00000622454 C14orf37Q86TY3 774 aa17.88■□□□□ 0.45
EPB42-210ENST00000622454 MAP3K19Q56UN5 1328 aa17.88■□□□□ 0.45
EPB42-210ENST00000622454 SOX12O15370 315 aa17.87■□□□□ 0.45
EPB42-210ENST00000622454 AEBP1Q8IUX7 1158 aa17.87■□□□□ 0.45
EPB42-210ENST00000622454 IPO9Q96P70 1041 aaKnown RBP17.87■□□□□ 0.45
EPB42-210ENST00000622454 NOB1Q9ULX3 412 aaKnown RBP17.87■□□□□ 0.45
EPB42-210ENST00000622454 SBNO1A3KN83 1393 aa17.87■□□□□ 0.45
EPB42-210ENST00000622454 FLT4P35916 1363 aa17.87■□□□□ 0.45
EPB42-210ENST00000622454 CFAP44Q96MT7 982 aa17.87■□□□□ 0.45
EPB42-210ENST00000622454 PCDHB15Q9Y5E8 787 aa17.87■□□□□ 0.45
EPB42-210ENST00000622454 USP54Q70EL1 1684 aa17.87■□□□□ 0.45
EPB42-210ENST00000622454 ADGRL3Q9HAR2 1447 aa17.86■□□□□ 0.45
EPB42-210ENST00000622454 RGS3P49796 1198 aa17.86■□□□□ 0.45
EPB42-210ENST00000622454 BRPF1P55201 1214 aaPredicted RBP17.86■□□□□ 0.45
EPB42-210ENST00000622454 MBIPQ9NS73 344 aa17.86■□□□□ 0.45
EPB42-210ENST00000622454 MARF1Q9Y4F3 1742 aaKnown RBP17.85■□□□□ 0.45
EPB42-210ENST00000622454 DDX19BQ9UMR2 479 aa17.85■□□□□ 0.45
EPB42-210ENST00000622454 NLRP6P59044 892 aa17.84■□□□□ 0.45
EPB42-210ENST00000622454 RWDD1Q9H446 243 aaPredicted RBP17.84■□□□□ 0.45
EPB42-210ENST00000622454 ARHGEF10O15013 1369 aa17.84■□□□□ 0.45
EPB42-210ENST00000622454 NWD1Q149M9 1564 aa17.84■□□□□ 0.45
EPB42-210ENST00000622454 FAM83GA6ND36 823 aa17.84■□□□□ 0.45
EPB42-210ENST00000622454 VAMP4O75379 141 aa17.84■□□□□ 0.45
EPB42-210ENST00000622454 FAM161AQ3B820 660 aa17.84■□□□□ 0.45
EPB42-210ENST00000622454 AMPHP49418 695 aa17.83■□□□□ 0.44
EPB42-210ENST00000622454 ITPRIPQ8IWB1 547 aa17.83■□□□□ 0.44
EPB42-210ENST00000622454 NOP58Q9Y2X3 529 aaKnown RBP17.83■□□□□ 0.44
EPB42-210ENST00000622454 HSPA2P54652 639 aa17.82■□□□□ 0.44
EPB42-210ENST00000622454 NPM2Q86SE8 214 aaKnown RBP17.82■□□□□ 0.44
EPB42-210ENST00000622454 KIF24Q5T7B8 1368 aa17.82■□□□□ 0.44
EPB42-210ENST00000622454 PROSER2Q86WR7 435 aaPredicted RBP17.82■□□□□ 0.44
EPB42-210ENST00000622454 PHF8Q9UPP1 1060 aa17.82■□□□□ 0.44
EPB42-210ENST00000622454 VIRMAQ69YN4 1812 aaKnown RBP17.81■□□□□ 0.44
EPB42-210ENST00000622454 DCTN1Q14203 1278 aa17.81■□□□□ 0.44
EPB42-210ENST00000622454 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
EPB42-210ENST00000622454 C8orf34Q49A92 452 aa17.8■□□□□ 0.44
EPB42-210ENST00000622454 ESCO1Q5FWF5 840 aa17.8■□□□□ 0.44
EPB42-210ENST00000622454 ABTB2Q8N961 1025 aa17.8■□□□□ 0.44
EPB42-210ENST00000622454 KDM4FA0A1W2PPD8 638 aa17.8■□□□□ 0.44
EPB42-210ENST00000622454 PAK3O75914 559 aaPredicted RBP17.8■□□□□ 0.44
EPB42-210ENST00000622454 TWISTNBQ3B726 338 aaPredicted RBP17.8■□□□□ 0.44
EPB42-210ENST00000622454 TMEM57Q8N5G2 664 aa17.8■□□□□ 0.44
EPB42-210ENST00000622454 KDRP35968 1356 aa17.8■□□□□ 0.44
EPB42-210ENST00000622454 ARHGAP45Q92619 1136 aa17.79■□□□□ 0.44
EPB42-210ENST00000622454 MRPL50Q8N5N7 158 aaKnown RBP17.79■□□□□ 0.44
EPB42-210ENST00000622454 ZBTB47Q9UFB7 747 aaPredicted RBP17.78■□□□□ 0.44
EPB42-210ENST00000622454 IGSF1Q8N6C5 1336 aa17.78■□□□□ 0.44
EPB42-210ENST00000622454 ELL2O00472 640 aaPredicted RBP17.78■□□□□ 0.44
EPB42-210ENST00000622454 NUTM2GQ5VZR2 741 aa17.78■□□□□ 0.44
EPB42-210ENST00000622454 C8orf58Q8NAV2 365 aa17.78■□□□□ 0.44
EPB42-210ENST00000622454 EYA1Q99502 592 aa17.76■□□□□ 0.43
EPB42-210ENST00000622454 ZBTB40Q9NUA8 1239 aa17.76■□□□□ 0.43
EPB42-210ENST00000622454 HOXC9P31274 260 aa17.76■□□□□ 0.43
EPB42-210ENST00000622454 HDAC1Q13547 482 aaPredicted RBP17.76■□□□□ 0.43
EPB42-210ENST00000622454 MCM10Q7L590 875 aa17.76■□□□□ 0.43
EPB42-210ENST00000622454 LTN1O94822 1766 aa17.76■□□□□ 0.43
EPB42-210ENST00000622454 CHL1O00533 1208 aa17.75■□□□□ 0.43
EPB42-210ENST00000622454 HAP1P54257 671 aaPredicted RBP17.75■□□□□ 0.43
EPB42-210ENST00000622454 PSME1Q06323 249 aa17.75■□□□□ 0.43
EPB42-210ENST00000622454 PDZRN3Q9UPQ7 1066 aa17.75■□□□□ 0.43
EPB42-210ENST00000622454 CHMP4BQ9H444 224 aaKnown RBP17.74■□□□□ 0.43
EPB42-210ENST00000622454 MTHFSDQ2M296 383 aaKnown RBP17.74■□□□□ 0.43
EPB42-210ENST00000622454 ORAI2Q96SN7 254 aa17.74■□□□□ 0.43
EPB42-210ENST00000622454 RTL1A6NKG5 1358 aa17.73■□□□□ 0.43
EPB42-210ENST00000622454 C19orf44Q9H6X5 657 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms