RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 ATF7IPQ6VMQ6 1270 aa29.21■■■□□ 2.27
NKX2-3-202ENST00000622383 OVOS2A0A0J9YW53 1432 aa29.21■■■□□ 2.27
NKX2-3-202ENST00000622383 OVOS2Q6IE36 1432 aa29.21■■■□□ 2.27
NKX2-3-202ENST00000622383 THEMISQ8N1K5 641 aaPredicted RBP29.21■■■□□ 2.27
NKX2-3-202ENST00000622383 NOB1Q9ULX3 412 aaKnown RBP29.21■■■□□ 2.27
NKX2-3-202ENST00000622383 PTCH1Q13635 1447 aa29.2■■■□□ 2.27
NKX2-3-202ENST00000622383 THUMPD2Q9BTF0 503 aaKnown RBP29.2■■■□□ 2.26
NKX2-3-202ENST00000622383 SSH2Q76I76 1423 aa29.18■■■□□ 2.26
NKX2-3-202ENST00000622383 ALDH1L2Q3SY69 923 aa29.18■■■□□ 2.26
NKX2-3-202ENST00000622383 CALD1Q05682 793 aaKnown RBP29.17■■■□□ 2.26
NKX2-3-202ENST00000622383 LAS1LQ9Y4W2 734 aaKnown RBP29.17■■■□□ 2.26
NKX2-3-202ENST00000622383 ZNF853P0CG23 659 aa29.16■■■□□ 2.26
NKX2-3-202ENST00000622383 RWDD1Q9H446 243 aaPredicted RBP29.16■■■□□ 2.26
NKX2-3-202ENST00000622383 IFT57Q9NWB7 429 aa29.15■■■□□ 2.26
NKX2-3-202ENST00000622383 KIF16BQ96L93 1317 aa29.15■■■□□ 2.26
NKX2-3-202ENST00000622383 EIF4A2Q14240 407 aaKnown RBP29.14■■■□□ 2.26
NKX2-3-202ENST00000622383 DIP2AQ14689 1571 aa29.14■■■□□ 2.26
NKX2-3-202ENST00000622383 USP31Q70CQ4 1352 aa29.13■■■□□ 2.25
NKX2-3-202ENST00000622383 ZNF428Q96B54 188 aa29.13■■■□□ 2.25
NKX2-3-202ENST00000622383 BRPF1P55201 1214 aaPredicted RBP29.13■■■□□ 2.25
NKX2-3-202ENST00000622383 GNAI1P63096 354 aa29.13■■■□□ 2.25
NKX2-3-202ENST00000622383 DDX19BQ9UMR2 479 aa29.13■■■□□ 2.25
NKX2-3-202ENST00000622383 IPO8O15397 1037 aaKnown RBP29.12■■■□□ 2.25
NKX2-3-202ENST00000622383 VAMP4O75379 141 aa29.11■■■□□ 2.25
NKX2-3-202ENST00000622383 LMOD3Q0VAK6 560 aa29.11■■■□□ 2.25
NKX2-3-202ENST00000622383 ITPRIPQ8IWB1 547 aa29.11■■■□□ 2.25
NKX2-3-202ENST00000622383 TMEM57Q8N5G2 664 aa29.11■■■□□ 2.25
NKX2-3-202ENST00000622383 DDRGK1Q96HY6 314 aa29.11■■■□□ 2.25
NKX2-3-202ENST00000622383 PDZRN3Q9UPQ7 1066 aa29.11■■■□□ 2.25
NKX2-3-202ENST00000622383 MBIPQ9NS73 344 aa29.1■■■□□ 2.25
NKX2-3-202ENST00000622383 NALCNQ8IZF0 1738 aa29.1■■■□□ 2.25
NKX2-3-202ENST00000622383 AEBP1Q8IUX7 1158 aa29.1■■■□□ 2.25
NKX2-3-202ENST00000622383 TSPYL6Q8N831 410 aa29.08■■■□□ 2.25
NKX2-3-202ENST00000622383 XRN1Q8IZH2 1706 aaKnown RBP29.07■■■□□ 2.24
NKX2-3-202ENST00000622383 PEAK1Q9H792 1746 aa29.07■■■□□ 2.24
NKX2-3-202ENST00000622383 TTC21AQ8NDW8 1320 aa29.07■■■□□ 2.24
NKX2-3-202ENST00000622383 CFAP44Q96MT7 982 aa29.07■■■□□ 2.24
NKX2-3-202ENST00000622383 FAM83GA6ND36 823 aa29.06■■■□□ 2.24
NKX2-3-202ENST00000622383 HSP90AB2PQ58FF8 381 aa29.06■■■□□ 2.24
NKX2-3-202ENST00000622383 SULT6B1Q6IMI4 303 aa29.06■■■□□ 2.24
NKX2-3-202ENST00000622383 HDAC1Q13547 482 aaPredicted RBP29.06■■■□□ 2.24
NKX2-3-202ENST00000622383 ZBTB40Q9NUA8 1239 aa29.06■■■□□ 2.24
NKX2-3-202ENST00000622383 DLG5Q8TDM6 1919 aa29.05■■■□□ 2.24
NKX2-3-202ENST00000622383 MRPL50Q8N5N7 158 aaKnown RBP29.04■■■□□ 2.24
NKX2-3-202ENST00000622383 NBR1Q14596 966 aa29.03■■■□□ 2.24
NKX2-3-202ENST00000622383 KCNA6P17658 529 aa29.02■■■□□ 2.24
NKX2-3-202ENST00000622383 DCTN1Q14203 1278 aa29.02■■■□□ 2.24
NKX2-3-202ENST00000622383 NGDNQ8NEJ9 315 aaKnown RBP29.01■■■□□ 2.23
NKX2-3-202ENST00000622383 CEP170BQ9Y4F5 1589 aaPredicted RBP29■■■□□ 2.23
NKX2-3-202ENST00000622383 RGPD1P0DJD0 1748 aa29■■■□□ 2.23
NKX2-3-202ENST00000622383 SOX12O15370 315 aa29■■■□□ 2.23
NKX2-3-202ENST00000622383 C8orf58Q8NAV2 365 aa29■■■□□ 2.23
NKX2-3-202ENST00000622383 ARHGAP45Q92619 1136 aa29■■■□□ 2.23
NKX2-3-202ENST00000622383 MAP3K19Q56UN5 1328 aa29■■■□□ 2.23
NKX2-3-202ENST00000622383 PIK3R4Q99570 1358 aa29■■■□□ 2.23
NKX2-3-202ENST00000622383 VIRMAQ69YN4 1812 aaKnown RBP29■■■□□ 2.23
NKX2-3-202ENST00000622383 ELL2O00472 640 aaPredicted RBP28.99■■■□□ 2.23
NKX2-3-202ENST00000622383 TWISTNBQ3B726 338 aaPredicted RBP28.99■■■□□ 2.23
NKX2-3-202ENST00000622383 USP19O94966 1318 aa28.99■■■□□ 2.23
NKX2-3-202ENST00000622383 SEC24BO95487 1268 aa28.98■■■□□ 2.23
NKX2-3-202ENST00000622383 ANKARQ7Z5J8 1434 aa28.98■■■□□ 2.23
NKX2-3-202ENST00000622383 RGPD8O14715 1765 aaPredicted RBP28.97■■■□□ 2.23
NKX2-3-202ENST00000622383 SMC5Q8IY18 1101 aa28.95■■■□□ 2.23
NKX2-3-202ENST00000622383 RIMS1Q86UR5 1692 aaKnown RBP28.94■■■□□ 2.22
NKX2-3-202ENST00000622383 SBNO1A3KN83 1393 aa28.94■■■□□ 2.22
NKX2-3-202ENST00000622383 ARHGEF10O15013 1369 aa28.94■■■□□ 2.22
NKX2-3-202ENST00000622383 FLT4P35916 1363 aa28.93■■■□□ 2.22
NKX2-3-202ENST00000622383 PIK3C2AO00443 1686 aa28.93■■■□□ 2.22
NKX2-3-202ENST00000622383 ZBTB7BO15156 539 aaPredicted RBP28.92■■■□□ 2.22
NKX2-3-202ENST00000622383 ABCC4O15439 1325 aa28.92■■■□□ 2.22
NKX2-3-202ENST00000622383 SLC4A3P48751 1232 aa28.91■■■□□ 2.22
NKX2-3-202ENST00000622383 CHL1O00533 1208 aa28.9■■■□□ 2.22
NKX2-3-202ENST00000622383 MCM10Q7L590 875 aa28.9■■■□□ 2.22
NKX2-3-202ENST00000622383 FMN2Q9NZ56 1722 aa28.89■■■□□ 2.21
NKX2-3-202ENST00000622383 KDRP35968 1356 aa28.87■■■□□ 2.21
NKX2-3-202ENST00000622383 NLRP6P59044 892 aa28.87■■■□□ 2.21
NKX2-3-202ENST00000622383 AMPHP49418 695 aa28.86■■■□□ 2.21
NKX2-3-202ENST00000622383 ANKLE2Q86XL3 938 aa28.86■■■□□ 2.21
NKX2-3-202ENST00000622383 CRB1P82279 1406 aa28.85■■■□□ 2.21
NKX2-3-202ENST00000622383 IGSF1Q8N6C5 1336 aa28.85■■■□□ 2.21
NKX2-3-202ENST00000622383 EYA1Q99502 592 aa28.84■■■□□ 2.21
NKX2-3-202ENST00000622383 CHMP4BQ9H444 224 aaKnown RBP28.84■■■□□ 2.21
NKX2-3-202ENST00000622383 MTHFSDQ2M296 383 aaKnown RBP28.84■■■□□ 2.21
NKX2-3-202ENST00000622383 KRT24Q2M2I5 525 aa28.84■■■□□ 2.21
NKX2-3-202ENST00000622383 API5Q9BZZ5 524 aaKnown RBP28.84■■■□□ 2.21
NKX2-3-202ENST00000622383 NUCB1Q02818 461 aa28.83■■■□□ 2.21
NKX2-3-202ENST00000622383 DAXXQ9UER7 740 aaPredicted RBP28.82■■■□□ 2.2
NKX2-3-202ENST00000622383 KIAA0232Q92628 1395 aa28.82■■■□□ 2.2
NKX2-3-202ENST00000622383 FOXO3O43524 673 aa28.82■■■□□ 2.2
NKX2-3-202ENST00000622383 MARF1Q9Y4F3 1742 aaKnown RBP28.81■■■□□ 2.2
NKX2-3-202ENST00000622383 NUTM2GQ5VZR2 741 aa28.81■■■□□ 2.2
NKX2-3-202ENST00000622383 ADAMTSL3P82987 1691 aa28.8■■■□□ 2.2
NKX2-3-202ENST00000622383 C1orf115Q9H7X2 142 aa28.79■■■□□ 2.2
NKX2-3-202ENST00000622383 ZNF142P52746 1687 aaPredicted RBP28.79■■■□□ 2.2
NKX2-3-202ENST00000622383 KIF24Q5T7B8 1368 aa28.79■■■□□ 2.2
NKX2-3-202ENST00000622383 USP54Q70EL1 1684 aa28.79■■■□□ 2.2
NKX2-3-202ENST00000622383 CHD2O14647 1828 aaKnown RBP28.78■■■□□ 2.2
NKX2-3-202ENST00000622383 HOXC9P31274 260 aa28.78■■■□□ 2.2
NKX2-3-202ENST00000622383 RTL5Q5HYW3 569 aaPredicted RBP28.78■■■□□ 2.2
NKX2-3-202ENST00000622383 ABTB2Q8N961 1025 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms