RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 IPO8O15397 1037 aaKnown RBP16■□□□□ 0.15
SCAMP1-207ENST00000621999 NPC1L1Q9UHC9 1359 aa16■□□□□ 0.15
SCAMP1-207ENST00000621999 SLIT1O75093 1534 aa16■□□□□ 0.15
SCAMP1-207ENST00000621999 ARHGAP23Q9P227 1491 aa16■□□□□ 0.15
SCAMP1-207ENST00000621999 MYO3AQ8NEV4 1616 aa16■□□□□ 0.15
SCAMP1-207ENST00000621999 USP6P35125 1406 aa16■□□□□ 0.15
SCAMP1-207ENST00000621999 QRICH2Q9H0J4 1663 aa16■□□□□ 0.15
SCAMP1-207ENST00000621999 SLC4A10Q6U841 1118 aa15.99■□□□□ 0.15
SCAMP1-207ENST00000621999 WWC1Q8IX03 1113 aa15.99■□□□□ 0.15
SCAMP1-207ENST00000621999 IP6K1Q92551 441 aa15.99■□□□□ 0.15
SCAMP1-207ENST00000621999 PTCH1Q13635 1447 aa15.99■□□□□ 0.15
SCAMP1-207ENST00000621999 MS4A1P11836 297 aa15.99■□□□□ 0.15
SCAMP1-207ENST00000621999 EYA1Q99502 592 aa15.99■□□□□ 0.15
SCAMP1-207ENST00000621999 MIS18AQ9NYP9 233 aa15.98■□□□□ 0.15
SCAMP1-207ENST00000621999 BTG4Q9NY30 223 aa15.98■□□□□ 0.15
SCAMP1-207ENST00000621999 NPHP1O15259 732 aa15.98■□□□□ 0.15
SCAMP1-207ENST00000621999 NEURL4Q96JN8 1562 aa15.98■□□□□ 0.15
SCAMP1-207ENST00000621999 UBR1Q8IWV7 1749 aa15.98■□□□□ 0.15
SCAMP1-207ENST00000621999 POLR3AO14802 1390 aaPredicted RBP15.97■□□□□ 0.15
SCAMP1-207ENST00000621999 EXOSC9Q06265 439 aaKnown RBP15.97■□□□□ 0.15
SCAMP1-207ENST00000621999 MPRIPQ6WCQ1 1025 aa15.97■□□□□ 0.15
SCAMP1-207ENST00000621999 KAT6BQ8WYB5 2073 aa15.97■□□□□ 0.15
SCAMP1-207ENST00000621999 ATP7BP35670 1465 aa15.97■□□□□ 0.15
SCAMP1-207ENST00000621999 TULP4Q9NRJ4 1543 aa15.97■□□□□ 0.15
SCAMP1-207ENST00000621999 GNAT3A8MTJ3 354 aa15.97■□□□□ 0.15
SCAMP1-207ENST00000621999 ARHGEF10O15013 1369 aa15.96■□□□□ 0.15
SCAMP1-207ENST00000621999 FAM83GA6ND36 823 aa15.96■□□□□ 0.15
SCAMP1-207ENST00000621999 ITPRIPQ8IWB1 547 aa15.96■□□□□ 0.15
SCAMP1-207ENST00000621999 CABP4P57796 275 aa15.96■□□□□ 0.14
SCAMP1-207ENST00000621999 CHMP4AQ9BY43 222 aa15.96■□□□□ 0.14
SCAMP1-207ENST00000621999 B4GALNT3Q6L9W6 998 aa15.95■□□□□ 0.14
SCAMP1-207ENST00000621999 ANKARQ7Z5J8 1434 aa15.95■□□□□ 0.14
SCAMP1-207ENST00000621999 KIAA1210Q9ULL0 1709 aa15.94■□□□□ 0.14
SCAMP1-207ENST00000621999 DLC1Q96QB1 1528 aa15.94■□□□□ 0.14
SCAMP1-207ENST00000621999 PHACTR3Q96KR7 559 aa15.94■□□□□ 0.14
SCAMP1-207ENST00000621999 TECPR2O15040 1411 aa15.94■□□□□ 0.14
SCAMP1-207ENST00000621999 AMOTQ4VCS5 1084 aa15.93■□□□□ 0.14
SCAMP1-207ENST00000621999 RBM42Q9BTD8 480 aaKnown RBP15.93■□□□□ 0.14
SCAMP1-207ENST00000621999 WDR63Q8IWG1 891 aa15.93■□□□□ 0.14
SCAMP1-207ENST00000621999 SBNO1A3KN83 1393 aa15.93■□□□□ 0.14
SCAMP1-207ENST00000621999 IL13P35225 146 aa15.93■□□□□ 0.14
SCAMP1-207ENST00000621999 ADAMTSL3P82987 1691 aa15.92■□□□□ 0.14
SCAMP1-207ENST00000621999 EXOC5O00471 708 aa15.92■□□□□ 0.14
SCAMP1-207ENST00000621999 C1orf167Q5SNV9 1468 aa15.92■□□□□ 0.14
SCAMP1-207ENST00000621999 CERKQ8TCT0 537 aa15.91■□□□□ 0.14
SCAMP1-207ENST00000621999 TWISTNBQ3B726 338 aaPredicted RBP15.91■□□□□ 0.14
SCAMP1-207ENST00000621999 NBPF6Q5VWK0 638 aa15.91■□□□□ 0.14
SCAMP1-207ENST00000621999 NBPF4Q96M43 638 aa15.91■□□□□ 0.14
SCAMP1-207ENST00000621999 BTBD11A6QL63 1104 aa15.9■□□□□ 0.14
SCAMP1-207ENST00000621999 IQGAP1P46940 1657 aa15.9■□□□□ 0.14
SCAMP1-207ENST00000621999 HSP90AB1P08238 724 aaKnown RBP15.89■□□□□ 0.14
SCAMP1-207ENST00000621999 PPP4R2Q9NY27 417 aa15.89■□□□□ 0.14
SCAMP1-207ENST00000621999 MTHFSDQ2M296 383 aaKnown RBP15.89■□□□□ 0.13
SCAMP1-207ENST00000621999 SPATA31A3Q5VYP0 1347 aa15.89■□□□□ 0.13
SCAMP1-207ENST00000621999 KIAA0232Q92628 1395 aa15.89■□□□□ 0.13
SCAMP1-207ENST00000621999 AIMP1Q12904 312 aaKnown RBP15.89■□□□□ 0.13
SCAMP1-207ENST00000621999 ZKSCAN2Q63HK3 967 aa15.89■□□□□ 0.13
SCAMP1-207ENST00000621999 ARHGEF25Q86VW2 580 aa15.89■□□□□ 0.13
SCAMP1-207ENST00000621999 PTCD1O75127 700 aaKnown RBP15.88■□□□□ 0.13
SCAMP1-207ENST00000621999 FKBP5Q13451 457 aaPredicted RBP15.88■□□□□ 0.13
SCAMP1-207ENST00000621999 CHMP4BQ9H444 224 aaKnown RBP15.88■□□□□ 0.13
SCAMP1-207ENST00000621999 SLFN5Q08AF3 891 aa15.88■□□□□ 0.13
SCAMP1-207ENST00000621999 RRP1P56182 461 aaKnown RBP15.88■□□□□ 0.13
SCAMP1-207ENST00000621999 IFNL2Q8IZJ0 200 aa15.88■□□□□ 0.13
SCAMP1-207ENST00000621999 RSPH6AQ9H0K4 717 aa15.88■□□□□ 0.13
SCAMP1-207ENST00000621999 COG6Q9Y2V7 657 aa15.88■□□□□ 0.13
SCAMP1-207ENST00000621999 ZCRB1Q8TBF4 217 aaKnown RBP15.87■□□□□ 0.13
SCAMP1-207ENST00000621999 DIP2AQ14689 1571 aa15.87■□□□□ 0.13
SCAMP1-207ENST00000621999 BCAR3O75815 825 aa15.86■□□□□ 0.13
SCAMP1-207ENST00000621999 IL2RBP14784 551 aa15.86■□□□□ 0.13
SCAMP1-207ENST00000621999 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
SCAMP1-207ENST00000621999 APBB1O00213 710 aa15.86■□□□□ 0.13
SCAMP1-207ENST00000621999 HDGFL1Q5TGJ6 251 aa15.86■□□□□ 0.13
SCAMP1-207ENST00000621999 MSH5O43196 834 aa15.84■□□□□ 0.13
SCAMP1-207ENST00000621999 OS9Q13438 667 aaPredicted RBP15.84■□□□□ 0.13
SCAMP1-207ENST00000621999 NKTRP30414 1462 aaKnown RBP15.84■□□□□ 0.13
SCAMP1-207ENST00000621999 TMOD3Q9NYL9 352 aa15.84■□□□□ 0.13
SCAMP1-207ENST00000621999 DAXXQ9UER7 740 aaPredicted RBP15.84■□□□□ 0.13
SCAMP1-207ENST00000621999 CPSF1Q10570 1443 aaKnown RBP15.84■□□□□ 0.13
SCAMP1-207ENST00000621999 DDB1Q16531 1140 aa15.83■□□□□ 0.13
SCAMP1-207ENST00000621999 LARP1Q6PKG0 1096 aaKnown RBP15.83■□□□□ 0.13
SCAMP1-207ENST00000621999 SLC4A2P04920 1241 aa15.83■□□□□ 0.12
SCAMP1-207ENST00000621999 EXOC6Q8TAG9 804 aa15.83■□□□□ 0.12
SCAMP1-207ENST00000621999 RGS3P49796 1198 aa15.83■□□□□ 0.12
SCAMP1-207ENST00000621999 AATKQ6ZMQ8 1374 aa15.83■□□□□ 0.12
SCAMP1-207ENST00000621999 CCDC30Q5VVM6 783 aa15.82■□□□□ 0.12
SCAMP1-207ENST00000621999 ARHGEF28Q8N1W1 1705 aaKnown RBP15.82■□□□□ 0.12
SCAMP1-207ENST00000621999 PANK1Q8TE04 598 aa15.82■□□□□ 0.12
SCAMP1-207ENST00000621999 CRBNQ96SW2 442 aa15.82■□□□□ 0.12
SCAMP1-207ENST00000621999 DZIP1LQ8IYY4 767 aaKnown RBP15.82■□□□□ 0.12
SCAMP1-207ENST00000621999 ZNF428Q96B54 188 aa15.81■□□□□ 0.12
SCAMP1-207ENST00000621999 IFT57Q9NWB7 429 aa15.81■□□□□ 0.12
SCAMP1-207ENST00000621999 ACSBG1Q96GR2 724 aa15.81■□□□□ 0.12
SCAMP1-207ENST00000621999 USP21Q9UK80 565 aa15.81■□□□□ 0.12
SCAMP1-207ENST00000621999 FANCIQ9NVI1 1328 aa15.81■□□□□ 0.12
SCAMP1-207ENST00000621999 INSRP06213 1382 aa15.81■□□□□ 0.12
SCAMP1-207ENST00000621999 DUSP27Q5VZP5 1158 aa15.81■□□□□ 0.12
SCAMP1-207ENST00000621999 AXIN2Q9Y2T1 843 aa15.81■□□□□ 0.12
SCAMP1-207ENST00000621999 CHMP3Q9Y3E7 222 aa15.81■□□□□ 0.12
SCAMP1-207ENST00000621999 MYL6BP14649 208 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms