RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 PCMTD1Q96MG8 357 aaPredicted RBP12.46□□□□□ -0.41
TARDBP-224ENST00000621573 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.46□□□□□ -0.41
TARDBP-224ENST00000621573 ZNF644Q9H582 1327 aaPredicted RBP12.45□□□□□ -0.42
TARDBP-224ENST00000621573 CFAP74Q9C0B2 1584 aa12.45□□□□□ -0.42
TARDBP-224ENST00000621573 C6orf229H3BNL8 230 aa12.45□□□□□ -0.42
TARDBP-224ENST00000621573 QPCTQ16769 361 aa12.45□□□□□ -0.42
TARDBP-224ENST00000621573 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
TARDBP-224ENST00000621573 CABLES1Q8TDN4 633 aa12.45□□□□□ -0.42
TARDBP-224ENST00000621573 SPSB2Q99619 263 aa12.45□□□□□ -0.42
TARDBP-224ENST00000621573 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
TARDBP-224ENST00000621573 HRCP23327 699 aa12.44□□□□□ -0.42
TARDBP-224ENST00000621573 PRPF38BQ5VTL8 546 aaKnown RBP12.44□□□□□ -0.42
TARDBP-224ENST00000621573 LILRB3O75022 631 aa12.43□□□□□ -0.42
TARDBP-224ENST00000621573 MTMR2Q13614 643 aa12.43□□□□□ -0.42
TARDBP-224ENST00000621573 FBXO31Q5XUX0 539 aaPredicted RBP12.43□□□□□ -0.42
TARDBP-224ENST00000621573 ZBTB3Q9H5J0 574 aa12.43□□□□□ -0.42
TARDBP-224ENST00000621573 PLA2G2EQ9NZK7 142 aa12.43□□□□□ -0.42
TARDBP-224ENST00000621573 PREX2Q70Z35 1606 aa12.43□□□□□ -0.42
TARDBP-224ENST00000621573 ADH1BP00325 375 aa12.42□□□□□ -0.42
TARDBP-224ENST00000621573 USB1Q9BQ65 265 aaKnown RBP12.42□□□□□ -0.42
TARDBP-224ENST00000621573 PLEKHH2Q8IVE3 1493 aa12.41□□□□□ -0.42
TARDBP-224ENST00000621573 IFFO2Q5TF58 517 aa12.41□□□□□ -0.42
TARDBP-224ENST00000621573 MYOM3Q5VTT5 1437 aa12.41□□□□□ -0.42
TARDBP-224ENST00000621573 POGZQ7Z3K3 1410 aa12.41□□□□□ -0.42
TARDBP-224ENST00000621573 RETREG3Q86VR2 466 aa12.41□□□□□ -0.42
TARDBP-224ENST00000621573 FAM160A2Q8N612 972 aaPredicted RBP12.41□□□□□ -0.42
TARDBP-224ENST00000621573 CDC42BPBQ9Y5S2 1711 aa12.41□□□□□ -0.42
TARDBP-224ENST00000621573 CDC42BPAQ5VT25 1732 aa12.4□□□□□ -0.42
TARDBP-224ENST00000621573 TRAPPC8Q9Y2L5 1435 aa12.4□□□□□ -0.42
TARDBP-224ENST00000621573 SPDYE5A6NIY4 337 aa12.4□□□□□ -0.42
TARDBP-224ENST00000621573 KIAA1107Q9UPP5 1409 aa12.39□□□□□ -0.43
TARDBP-224ENST00000621573 ARHGEF12Q9NZN5 1544 aa12.39□□□□□ -0.43
TARDBP-224ENST00000621573 NUTM2BA6NNL0 878 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-224ENST00000621573 NUTM2EB1AL46 878 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-224ENST00000621573 RTL5Q5HYW3 569 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-224ENST00000621573 NUTM2DQ5VT03 806 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-224ENST00000621573 NUTM2AQ8IVF1 878 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-224ENST00000621573 ZNF518AQ6AHZ1 1483 aa12.39□□□□□ -0.43
TARDBP-224ENST00000621573 SPAG9O60271 1321 aaKnown RBP12.38□□□□□ -0.43
TARDBP-224ENST00000621573 ARID4BQ4LE39 1312 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-224ENST00000621573 MIA2Q96PC5 1412 aa12.38□□□□□ -0.43
TARDBP-224ENST00000621573 ABCC1P33527 1531 aa12.38□□□□□ -0.43
TARDBP-224ENST00000621573 PPP2R2DQ66LE6 453 aa12.38□□□□□ -0.43
TARDBP-224ENST00000621573 SYCP2Q9BX26 1530 aa12.37□□□□□ -0.43
TARDBP-224ENST00000621573 FAM50AQ14320 339 aaKnown RBP12.37□□□□□ -0.43
TARDBP-224ENST00000621573 MSS51Q4VC12 460 aa12.37□□□□□ -0.43
TARDBP-224ENST00000621573 PRR7Q8TB68 274 aa12.37□□□□□ -0.43
TARDBP-224ENST00000621573 SAMD9LQ8IVG5 1584 aa12.37□□□□□ -0.43
TARDBP-224ENST00000621573 ITSN2Q9NZM3 1697 aa12.37□□□□□ -0.43
TARDBP-224ENST00000621573 FRMPD1Q5SYB0 1578 aa12.36□□□□□ -0.43
TARDBP-224ENST00000621573 CAMSAP2Q08AD1 1489 aa12.36□□□□□ -0.43
TARDBP-224ENST00000621573 CFAP99D6REC4 459 aa12.36□□□□□ -0.43
TARDBP-224ENST00000621573 TSPY4P0CV99 314 aa12.36□□□□□ -0.43
TARDBP-224ENST00000621573 TSPY10P0CW01 314 aa12.36□□□□□ -0.43
TARDBP-224ENST00000621573 SLC6A16Q9GZN6 736 aa12.36□□□□□ -0.43
TARDBP-224ENST00000621573 PRDM9Q9NQV7 894 aa12.36□□□□□ -0.43
TARDBP-224ENST00000621573 S1PR4O95977 384 aa12.35□□□□□ -0.43
TARDBP-224ENST00000621573 FGD6Q6ZV73 1430 aa12.35□□□□□ -0.43
TARDBP-224ENST00000621573 YEATS2Q9ULM3 1422 aa12.35□□□□□ -0.43
TARDBP-224ENST00000621573 MAGI2Q86UL8 1455 aa12.34□□□□□ -0.43
TARDBP-224ENST00000621573 MBD5Q9P267 1494 aa12.34□□□□□ -0.43
TARDBP-224ENST00000621573 ZFYVE16Q7Z3T8 1539 aa12.33□□□□□ -0.44
TARDBP-224ENST00000621573 RICTORQ6R327 1708 aa12.33□□□□□ -0.44
TARDBP-224ENST00000621573 ZMYM4Q5VZL5 1548 aa12.32□□□□□ -0.44
TARDBP-224ENST00000621573 RFC5P40937 340 aa12.32□□□□□ -0.44
TARDBP-224ENST00000621573 PPP1R18Q6NYC8 613 aa12.32□□□□□ -0.44
TARDBP-224ENST00000621573 ATP10AO60312 1499 aa12.32□□□□□ -0.44
TARDBP-224ENST00000621573 MLH3Q9UHC1 1453 aa12.32□□□□□ -0.44
TARDBP-224ENST00000621573 MMP16P51512 607 aa12.31□□□□□ -0.44
TARDBP-224ENST00000621573 MLECQ14165 292 aa12.31□□□□□ -0.44
TARDBP-224ENST00000621573 CCDC141Q6ZP82 1450 aa12.31□□□□□ -0.44
TARDBP-224ENST00000621573 KDM5CP41229 1560 aa12.3□□□□□ -0.44
TARDBP-224ENST00000621573 DXOO77932 396 aaKnown RBP12.3□□□□□ -0.44
TARDBP-224ENST00000621573 JUNDP17535 347 aa12.3□□□□□ -0.44
TARDBP-224ENST00000621573 DESI1Q6ICB0 168 aa12.3□□□□□ -0.44
TARDBP-224ENST00000621573 ARHGEF40Q8TER5 1519 aa12.29□□□□□ -0.44
TARDBP-224ENST00000621573 TSC1Q92574 1164 aa12.29□□□□□ -0.44
TARDBP-224ENST00000621573 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
TARDBP-224ENST00000621573 PTPN23Q9H3S7 1636 aa12.29□□□□□ -0.44
TARDBP-224ENST00000621573 C9orf84Q5VXU9 1444 aa12.28□□□□□ -0.44
TARDBP-224ENST00000621573 TCOF1Q13428 1488 aaKnown RBP12.28□□□□□ -0.44
TARDBP-224ENST00000621573 HECW2Q9P2P5 1572 aa12.28□□□□□ -0.44
TARDBP-224ENST00000621573 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.28□□□□□ -0.44
TARDBP-224ENST00000621573 RTEL1-TNFRSF6BF6WH68 1400 aa12.28□□□□□ -0.44
TARDBP-224ENST00000621573 A0A0G2JS52 829 aa12.27□□□□□ -0.45
TARDBP-224ENST00000621573 RNF223E7ERA6 249 aa12.27□□□□□ -0.45
TARDBP-224ENST00000621573 PPEF1O14829 653 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-224ENST00000621573 GGCXP38435 758 aa12.27□□□□□ -0.45
TARDBP-224ENST00000621573 ITGAEP38570 1179 aa12.27□□□□□ -0.45
TARDBP-224ENST00000621573 ABCC5O15440 1437 aa12.27□□□□□ -0.45
TARDBP-224ENST00000621573 HELBQ8NG08 1087 aaPredicted RBP12.26□□□□□ -0.45
TARDBP-224ENST00000621573 ATP7AQ04656 1500 aa12.26□□□□□ -0.45
TARDBP-224ENST00000621573 ARHGEF5Q12774 1597 aa12.26□□□□□ -0.45
TARDBP-224ENST00000621573 PER1O15534 1290 aaPredicted RBP12.25□□□□□ -0.45
TARDBP-224ENST00000621573 AP1G2O75843 785 aa12.25□□□□□ -0.45
TARDBP-224ENST00000621573 CTDSPL2Q05D32 466 aa12.25□□□□□ -0.45
TARDBP-224ENST00000621573 RRP7BPQ9NSQ0 103 aa12.25□□□□□ -0.45
TARDBP-224ENST00000621573 DAPK1P53355 1430 aa12.25□□□□□ -0.45
TARDBP-224ENST00000621573 TMEM259Q4ZIN3 620 aa12.24□□□□□ -0.45
TARDBP-224ENST00000621573 LYPD8Q6UX82 237 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms