RNA–Protein interactions for RNA: ENST00000619914.1

SYNRG-226, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-226ENST00000619914 EXOSC9Q06265 439 aaKnown RBP10.68□□□□□ -0.7
SYNRG-226ENST00000619914 PROSER2Q86WR7 435 aaPredicted RBP10.68□□□□□ -0.7
SYNRG-226ENST00000619914 CD163L1Q9NR16 1453 aa10.67□□□□□ -0.7
SYNRG-226ENST00000619914 IDI1Q13907 227 aa10.67□□□□□ -0.7
SYNRG-226ENST00000619914 SMC4Q9NTJ3 1288 aa10.67□□□□□ -0.7
SYNRG-226ENST00000619914 TRIM35Q9UPQ4 493 aa10.67□□□□□ -0.7
SYNRG-226ENST00000619914 YTHDC2Q9H6S0 1430 aaKnown RBP10.67□□□□□ -0.7
SYNRG-226ENST00000619914 MSH6P52701 1360 aa10.67□□□□□ -0.7
SYNRG-226ENST00000619914 U2SURPO15042 1029 aaKnown RBP10.66□□□□□ -0.7
SYNRG-226ENST00000619914 HDGFL2Q7Z4V5 671 aaPredicted RBP10.66□□□□□ -0.7
SYNRG-226ENST00000619914 SLAIN2Q9P270 581 aa10.66□□□□□ -0.7
SYNRG-226ENST00000619914 PNPLA6Q8IY17 1366 aa10.66□□□□□ -0.7
SYNRG-226ENST00000619914 KIF16BQ96L93 1317 aa10.66□□□□□ -0.7
SYNRG-226ENST00000619914 IPO8O15397 1037 aaKnown RBP10.66□□□□□ -0.7
SYNRG-226ENST00000619914 KCNA6P17658 529 aa10.66□□□□□ -0.7
SYNRG-226ENST00000619914 NUTM2DQ5VT03 806 aaPredicted RBP10.66□□□□□ -0.7
SYNRG-226ENST00000619914 ATF7IPQ6VMQ6 1270 aa10.66□□□□□ -0.7
SYNRG-226ENST00000619914 TSR2Q969E8 191 aaKnown RBP10.66□□□□□ -0.7
SYNRG-226ENST00000619914 GGNBP2Q9H3C7 697 aa10.66□□□□□ -0.7
SYNRG-226ENST00000619914 ANTXR1Q9H6X2 564 aa10.66□□□□□ -0.7
SYNRG-226ENST00000619914 NUTM2BA6NNL0 878 aaPredicted RBP10.65□□□□□ -0.7
SYNRG-226ENST00000619914 NUTM2EB1AL46 878 aaPredicted RBP10.65□□□□□ -0.7
SYNRG-226ENST00000619914 FYB1O15117 783 aa10.65□□□□□ -0.7
SYNRG-226ENST00000619914 DIAPH1O60610 1272 aaKnown RBP10.65□□□□□ -0.7
SYNRG-226ENST00000619914 TRIM27P14373 513 aa10.65□□□□□ -0.7
SYNRG-226ENST00000619914 LTKP29376 864 aa10.65□□□□□ -0.7
SYNRG-226ENST00000619914 DSG3P32926 999 aa10.65□□□□□ -0.7
SYNRG-226ENST00000619914 ALDH1L2Q3SY69 923 aa10.65□□□□□ -0.7
SYNRG-226ENST00000619914 NUTM2AQ8IVF1 878 aaPredicted RBP10.65□□□□□ -0.7
SYNRG-226ENST00000619914 SSH1Q8WYL5 1049 aa10.65□□□□□ -0.7
SYNRG-226ENST00000619914 DLC1Q96QB1 1528 aa10.65□□□□□ -0.71
SYNRG-226ENST00000619914 LRP6O75581 1613 aa10.64□□□□□ -0.71
SYNRG-226ENST00000619914 SMC5Q8IY18 1101 aa10.64□□□□□ -0.71
SYNRG-226ENST00000619914 ZNF428Q96B54 188 aa10.64□□□□□ -0.71
SYNRG-226ENST00000619914 POGKQ9P215 609 aa10.64□□□□□ -0.71
SYNRG-226ENST00000619914 STK26Q9P289 416 aa10.64□□□□□ -0.71
SYNRG-226ENST00000619914 BRPF3Q9ULD4 1205 aa10.64□□□□□ -0.71
SYNRG-226ENST00000619914 RIPK4P57078 832 aa10.63□□□□□ -0.71
SYNRG-226ENST00000619914 SAFB2Q14151 953 aaKnown RBP eCLIP10.63□□□□□ -0.71
SYNRG-226ENST00000619914 ITPRIPQ8IWB1 547 aa10.63□□□□□ -0.71
SYNRG-226ENST00000619914 PRAM1Q96QH2 718 aa10.63□□□□□ -0.71
SYNRG-226ENST00000619914 TBC1D2Q9BYX2 928 aa10.63□□□□□ -0.71
SYNRG-226ENST00000619914 MINK1Q8N4C8 1332 aaPredicted RBP10.63□□□□□ -0.71
SYNRG-226ENST00000619914 ATP7BP35670 1465 aa10.63□□□□□ -0.71
SYNRG-226ENST00000619914 FCHSD2O94868 740 aa10.63□□□□□ -0.71
SYNRG-226ENST00000619914 BRPF1P55201 1214 aaPredicted RBP10.63□□□□□ -0.71
SYNRG-226ENST00000619914 CHMP4BQ9H444 224 aaKnown RBP10.63□□□□□ -0.71
SYNRG-226ENST00000619914 ZNF219Q9P2Y4 722 aaPredicted RBP10.63□□□□□ -0.71
SYNRG-226ENST00000619914 NOB1Q9ULX3 412 aaKnown RBP10.63□□□□□ -0.71
SYNRG-226ENST00000619914 PPIP5K1Q6PFW1 1433 aa10.62□□□□□ -0.71
SYNRG-226ENST00000619914 UBR1Q8IWV7 1749 aa10.62□□□□□ -0.71
SYNRG-226ENST00000619914 L1TD1Q5T7N2 865 aaKnown RBP10.62□□□□□ -0.71
SYNRG-226ENST00000619914 RBM33Q96EV2 1170 aaKnown RBP10.62□□□□□ -0.71
SYNRG-226ENST00000619914 C22orf23Q9BZE7 217 aa10.62□□□□□ -0.71
SYNRG-226ENST00000619914 SLKQ9H2G2 1235 aaPredicted RBP10.62□□□□□ -0.71
SYNRG-226ENST00000619914 SLIT1O75093 1534 aa10.62□□□□□ -0.71
SYNRG-226ENST00000619914 ARHGAP23Q9P227 1491 aa10.61□□□□□ -0.71
SYNRG-226ENST00000619914 COL16A1Q07092 1604 aaPredicted RBP10.61□□□□□ -0.71
SYNRG-226ENST00000619914 RBM6P78332 1123 aaKnown RBP10.61□□□□□ -0.71
SYNRG-226ENST00000619914 CALD1Q05682 793 aaKnown RBP10.61□□□□□ -0.71
SYNRG-226ENST00000619914 TMEM57Q8N5G2 664 aa10.61□□□□□ -0.71
SYNRG-226ENST00000619914 CDK19Q9BWU1 502 aa10.61□□□□□ -0.71
SYNRG-226ENST00000619914 ZBTB40Q9NUA8 1239 aa10.61□□□□□ -0.71
SYNRG-226ENST00000619914 AFF2P51816 1311 aa10.61□□□□□ -0.71
SYNRG-226ENST00000619914 ZBTB22O15209 634 aa10.6□□□□□ -0.71
SYNRG-226ENST00000619914 RTN4Q9NQC3 1192 aaKnown RBP10.6□□□□□ -0.71
SYNRG-226ENST00000619914 CHMP5Q9NZZ3 219 aa10.6□□□□□ -0.71
SYNRG-226ENST00000619914 STAG3Q9UJ98 1225 aa10.6□□□□□ -0.71
SYNRG-226ENST00000619914 MFAP1P55081 439 aaKnown RBP10.59□□□□□ -0.71
SYNRG-226ENST00000619914 NUCB1Q02818 461 aa10.59□□□□□ -0.71
SYNRG-226ENST00000619914 ARHGAP45Q92619 1136 aa10.59□□□□□ -0.71
SYNRG-226ENST00000619914 RSPH6AQ9H0K4 717 aa10.59□□□□□ -0.71
SYNRG-226ENST00000619914 PIK3R4Q99570 1358 aa10.59□□□□□ -0.71
SYNRG-226ENST00000619914 RGS12O14924 1447 aa10.58□□□□□ -0.72
SYNRG-226ENST00000619914 PTCH1Q13635 1447 aa10.58□□□□□ -0.72
SYNRG-226ENST00000619914 MAP2P11137 1827 aaKnown RBP10.58□□□□□ -0.72
SYNRG-226ENST00000619914 FAM43AQ8N2R8 423 aa10.58□□□□□ -0.72
SYNRG-226ENST00000619914 NGLY1Q96IV0 654 aa10.58□□□□□ -0.72
SYNRG-226ENST00000619914 QTRT2Q9H974 415 aaKnown RBP10.58□□□□□ -0.72
SYNRG-226ENST00000619914 CABP1Q9NZU7 370 aa10.58□□□□□ -0.72
SYNRG-226ENST00000619914 NFE2L2Q16236 605 aa10.57□□□□□ -0.72
SYNRG-226ENST00000619914 HSCBQ8IWL3 235 aa10.57□□□□□ -0.72
SYNRG-226ENST00000619914 SLC26A8Q96RN1 970 aa10.57□□□□□ -0.72
SYNRG-226ENST00000619914 TMEM2Q9UHN6 1383 aa10.57□□□□□ -0.72
SYNRG-226ENST00000619914 PRKAR2BP31323 418 aa10.57□□□□□ -0.72
SYNRG-226ENST00000619914 MCM4P33991 863 aa10.57□□□□□ -0.72
SYNRG-226ENST00000619914 RBM25P49756 843 aaKnown RBP10.57□□□□□ -0.72
SYNRG-226ENST00000619914 GNAI1P63096 354 aa10.57□□□□□ -0.72
SYNRG-226ENST00000619914 SNX21Q969T3 373 aa10.57□□□□□ -0.72
SYNRG-226ENST00000619914 GCC1Q96CN9 775 aa10.57□□□□□ -0.72
SYNRG-226ENST00000619914 POLKQ9UBT6 870 aa10.57□□□□□ -0.72
SYNRG-226ENST00000619914 EDC4Q6P2E9 1401 aaKnown RBP10.56□□□□□ -0.72
SYNRG-226ENST00000619914 CHD1LQ86WJ1 897 aa10.56□□□□□ -0.72
SYNRG-226ENST00000619914 MRPL50Q8N5N7 158 aaKnown RBP10.56□□□□□ -0.72
SYNRG-226ENST00000619914 IFT57Q9NWB7 429 aa10.56□□□□□ -0.72
SYNRG-226ENST00000619914 NCOA3Q9Y6Q9 1424 aa10.56□□□□□ -0.72
SYNRG-226ENST00000619914 AATKQ6ZMQ8 1374 aa10.55□□□□□ -0.72
SYNRG-226ENST00000619914 EIF5BO60841 1220 aaKnown RBP10.55□□□□□ -0.72
SYNRG-226ENST00000619914 LMOD3Q0VAK6 560 aa10.55□□□□□ -0.72
SYNRG-226ENST00000619914 BMP2KLQ5H9B9 411 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms