RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 CLCN6P51797 869 aa11.28□□□□□ -0.6
SENP3-210ENST00000619785 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
SENP3-210ENST00000619785 GLI3P10071 1580 aa11.28□□□□□ -0.6
SENP3-210ENST00000619785 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
SENP3-210ENST00000619785 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
SENP3-210ENST00000619785 KIF3CO14782 793 aa11.27□□□□□ -0.61
SENP3-210ENST00000619785 TBC1D12O60347 775 aa11.27□□□□□ -0.61
SENP3-210ENST00000619785 FCHSD2O94868 740 aa11.27□□□□□ -0.61
SENP3-210ENST00000619785 HIC1Q14526 733 aa11.27□□□□□ -0.61
SENP3-210ENST00000619785 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
SENP3-210ENST00000619785 C8orf37Q96NL8 207 aa11.27□□□□□ -0.61
SENP3-210ENST00000619785 CHIC2Q9UKJ5 165 aa11.27□□□□□ -0.61
SENP3-210ENST00000619785 TRPC5Q9UL62 973 aaPredicted RBP11.27□□□□□ -0.61
SENP3-210ENST00000619785 CLTCL1P53675 1640 aa11.27□□□□□ -0.61
SENP3-210ENST00000619785 NWD2Q9ULI1 1742 aa11.26□□□□□ -0.61
SENP3-210ENST00000619785 PXDNQ92626 1479 aa11.26□□□□□ -0.61
SENP3-210ENST00000619785 IRX5P78411 483 aaPredicted RBP11.26□□□□□ -0.61
SENP3-210ENST00000619785 AMHR2Q16671 573 aa11.26□□□□□ -0.61
SENP3-210ENST00000619785 IER5LQ5T953 404 aa11.26□□□□□ -0.61
SENP3-210ENST00000619785 PLCG2P16885 1265 aa11.25□□□□□ -0.61
SENP3-210ENST00000619785 OSBPP22059 807 aa11.25□□□□□ -0.61
SENP3-210ENST00000619785 ATN1P54259 1190 aaPredicted RBP11.25□□□□□ -0.61
SENP3-210ENST00000619785 DDX12PQ92771 950 aa11.25□□□□□ -0.61
SENP3-210ENST00000619785 PPLO60437 1756 aa11.25□□□□□ -0.61
SENP3-210ENST00000619785 L3MBTL3Q96JM7 780 aaPredicted RBP11.24□□□□□ -0.61
SENP3-210ENST00000619785 BLMP54132 1417 aaPredicted RBP11.24□□□□□ -0.61
SENP3-210ENST00000619785 SLIT2O94813 1529 aa11.24□□□□□ -0.61
SENP3-210ENST00000619785 PTGER2P43116 358 aa11.23□□□□□ -0.61
SENP3-210ENST00000619785 TTLL12Q14166 644 aaPredicted RBP11.23□□□□□ -0.61
SENP3-210ENST00000619785 PARP9Q8IXQ6 854 aa11.23□□□□□ -0.61
SENP3-210ENST00000619785 USP21Q9UK80 565 aa11.23□□□□□ -0.61
SENP3-210ENST00000619785 KNDC1Q76NI1 1749 aa11.23□□□□□ -0.61
SENP3-210ENST00000619785 ABCA3Q99758 1704 aa11.23□□□□□ -0.61
SENP3-210ENST00000619785 NUTM2DQ5VT03 806 aaPredicted RBP11.22□□□□□ -0.61
SENP3-210ENST00000619785 DDX17Q92841 729 aaKnown RBP11.22□□□□□ -0.61
SENP3-210ENST00000619785 KIF1AQ12756 1690 aa11.21□□□□□ -0.61
SENP3-210ENST00000619785 USP32Q8NFA0 1604 aa11.21□□□□□ -0.61
SENP3-210ENST00000619785 HFM1A2PYH4 1435 aa11.21□□□□□ -0.61
SENP3-210ENST00000619785 PLCH1Q4KWH8 1693 aa11.2□□□□□ -0.62
SENP3-210ENST00000619785 ROBO2Q9HCK4 1378 aa11.2□□□□□ -0.62
SENP3-210ENST00000619785 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
SENP3-210ENST00000619785 OXER1Q8TDS5 423 aa11.2□□□□□ -0.62
SENP3-210ENST00000619785 FMN2Q9NZ56 1722 aa11.2□□□□□ -0.62
SENP3-210ENST00000619785 RALGAPBQ86X10 1494 aa11.19□□□□□ -0.62
SENP3-210ENST00000619785 TECPR2O15040 1411 aa11.19□□□□□ -0.62
SENP3-210ENST00000619785 IFT172Q9UG01 1749 aa11.19□□□□□ -0.62
SENP3-210ENST00000619785 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
SENP3-210ENST00000619785 NRAPQ86VF7 1730 aa11.18□□□□□ -0.62
SENP3-210ENST00000619785 ADAMTS2O95450 1211 aa11.18□□□□□ -0.62
SENP3-210ENST00000619785 FECHP22830 423 aa11.18□□□□□ -0.62
SENP3-210ENST00000619785 FLIIQ13045 1269 aa11.18□□□□□ -0.62
SENP3-210ENST00000619785 GJD4Q96KN9 370 aaPredicted RBP11.18□□□□□ -0.62
SENP3-210ENST00000619785 RGPD1P0DJD0 1748 aa11.18□□□□□ -0.62
SENP3-210ENST00000619785 NUP155O75694 1391 aa11.17□□□□□ -0.62
SENP3-210ENST00000619785 HAX1O00165 279 aa11.17□□□□□ -0.62
SENP3-210ENST00000619785 ONECUT3O60422 494 aaPredicted RBP11.17□□□□□ -0.62
SENP3-210ENST00000619785 EVI5O60447 810 aa11.17□□□□□ -0.62
SENP3-210ENST00000619785 ORAI2Q96SN7 254 aa11.17□□□□□ -0.62
SENP3-210ENST00000619785 TNS1Q9HBL0 1735 aaKnown RBP11.17□□□□□ -0.62
SENP3-210ENST00000619785 ASTLQ6HA08 431 aaPredicted RBP11.16□□□□□ -0.62
SENP3-210ENST00000619785 RGPD8O14715 1765 aaPredicted RBP11.16□□□□□ -0.62
SENP3-210ENST00000619785 NPHP3Q7Z494 1330 aa11.15□□□□□ -0.62
SENP3-210ENST00000619785 SEC24BO95487 1268 aa11.14□□□□□ -0.63
SENP3-210ENST00000619785 PTGDRQ13258 359 aa11.14□□□□□ -0.63
SENP3-210ENST00000619785 GOPCQ9HD26 462 aa11.14□□□□□ -0.63
SENP3-210ENST00000619785 DISP2A7MBM2 1401 aa11.14□□□□□ -0.63
SENP3-210ENST00000619785 CRYBG1Q9Y4K1 1723 aa11.14□□□□□ -0.63
SENP3-210ENST00000619785 LOC105371045A0A1W2PR82 267 aa11.13□□□□□ -0.63
SENP3-210ENST00000619785 THSD7AQ9UPZ6 1657 aa11.12□□□□□ -0.63
SENP3-210ENST00000619785 GIGYF2Q6Y7W6 1299 aaKnown RBP11.12□□□□□ -0.63
SENP3-210ENST00000619785 UNC5CLQ8IV45 518 aa11.12□□□□□ -0.63
SENP3-210ENST00000619785 PCMTD1Q96MG8 357 aaPredicted RBP11.12□□□□□ -0.63
SENP3-210ENST00000619785 ARID3AQ99856 593 aa11.12□□□□□ -0.63
SENP3-210ENST00000619785 RPGRIP1LQ68CZ1 1315 aa11.11□□□□□ -0.63
SENP3-210ENST00000619785 TMEM92Q6UXU6 159 aa11.11□□□□□ -0.63
SENP3-210ENST00000619785 LRPPRCP42704 1394 aaKnown RBP11.11□□□□□ -0.63
SENP3-210ENST00000619785 RREB1Q92766 1687 aa11.11□□□□□ -0.63
SENP3-210ENST00000619785 TRPM3Q9HCF6 1732 aaPredicted RBP11.1□□□□□ -0.63
SENP3-210ENST00000619785 FAM50AQ14320 339 aaKnown RBP11.1□□□□□ -0.63
SENP3-210ENST00000619785 ALS2Q96Q42 1657 aa11.1□□□□□ -0.63
SENP3-210ENST00000619785 SPATA31A3Q5VYP0 1347 aa11.09□□□□□ -0.63
SENP3-210ENST00000619785 CCDC144AA2RUR9 1427 aa11.09□□□□□ -0.63
SENP3-210ENST00000619785 NAIPQ13075 1403 aa11.09□□□□□ -0.63
SENP3-210ENST00000619785 VPS72Q15906 364 aa11.09□□□□□ -0.63
SENP3-210ENST00000619785 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
SENP3-210ENST00000619785 DEFB132Q7Z7B7 95 aa11.08□□□□□ -0.64
SENP3-210ENST00000619785 COL14A1Q05707 1796 aaKnown RBP11.08□□□□□ -0.64
SENP3-210ENST00000619785 ABCC11Q96J66 1382 aa11.07□□□□□ -0.64
SENP3-210ENST00000619785 HRCP23327 699 aa11.07□□□□□ -0.64
SENP3-210ENST00000619785 ZNF326Q5BKZ1 582 aaKnown RBP11.07□□□□□ -0.64
SENP3-210ENST00000619785 TNS3Q68CZ2 1445 aa11.07□□□□□ -0.64
SENP3-210ENST00000619785 NRXN1Q9ULB1 1477 aa11.06□□□□□ -0.64
SENP3-210ENST00000619785 MAP3K7O43318 606 aa11.06□□□□□ -0.64
SENP3-210ENST00000619785 MS4A1P11836 297 aa11.06□□□□□ -0.64
SENP3-210ENST00000619785 CLCN1P35523 988 aa11.06□□□□□ -0.64
SENP3-210ENST00000619785 PTCD2Q8WV60 388 aaKnown RBP11.06□□□□□ -0.64
SENP3-210ENST00000619785 EPAS1Q99814 870 aa11.06□□□□□ -0.64
SENP3-210ENST00000619785 ADGRB2O60241 1585 aa11.06□□□□□ -0.64
SENP3-210ENST00000619785 SBNO1A3KN83 1393 aa11.05□□□□□ -0.64
SENP3-210ENST00000619785 NUP188Q5SRE5 1749 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms