RNA–Protein interactions for RNA: ENST00000619661.2

PRAMEF25-202, Transcript of PRAME family member 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF25, Length 1,840 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25-202ENST00000619661 PTCH1Q13635 1447 aa18.78■□□□□ 0.6
PRAMEF25-202ENST00000619661 OVOS2Q6IE36 1432 aa18.78■□□□□ 0.6
PRAMEF25-202ENST00000619661 RIMS1Q86UR5 1692 aaKnown RBP18.77■□□□□ 0.6
PRAMEF25-202ENST00000619661 LMOD3Q0VAK6 560 aa18.77■□□□□ 0.6
PRAMEF25-202ENST00000619661 EMILIN1Q9Y6C2 1016 aa18.77■□□□□ 0.6
PRAMEF25-202ENST00000619661 IFT57Q9NWB7 429 aa18.77■□□□□ 0.59
PRAMEF25-202ENST00000619661 PIK3R4Q99570 1358 aa18.76■□□□□ 0.59
PRAMEF25-202ENST00000619661 ZNF853P0CG23 659 aa18.76■□□□□ 0.59
PRAMEF25-202ENST00000619661 SSH2Q76I76 1423 aa18.75■□□□□ 0.59
PRAMEF25-202ENST00000619661 PDZRN3Q9UPQ7 1066 aa18.75■□□□□ 0.59
PRAMEF25-202ENST00000619661 USP31Q70CQ4 1352 aa18.75■□□□□ 0.59
PRAMEF25-202ENST00000619661 USP6P35125 1406 aa18.75■□□□□ 0.59
PRAMEF25-202ENST00000619661 GNAI1P63096 354 aa18.74■□□□□ 0.59
PRAMEF25-202ENST00000619661 PTPRUQ92729 1446 aa18.74■□□□□ 0.59
PRAMEF25-202ENST00000619661 RGPD1P0DJD0 1748 aa18.74■□□□□ 0.59
PRAMEF25-202ENST00000619661 ARHGAP45Q92619 1136 aa18.74■□□□□ 0.59
PRAMEF25-202ENST00000619661 USP19O94966 1318 aa18.74■□□□□ 0.59
PRAMEF25-202ENST00000619661 DLG5Q8TDM6 1919 aa18.74■□□□□ 0.59
PRAMEF25-202ENST00000619661 RTL5Q5HYW3 569 aaPredicted RBP18.73■□□□□ 0.59
PRAMEF25-202ENST00000619661 PHACTR3Q96KR7 559 aa18.73■□□□□ 0.59
PRAMEF25-202ENST00000619661 NOB1Q9ULX3 412 aaKnown RBP18.73■□□□□ 0.59
PRAMEF25-202ENST00000619661 TTC21BQ7Z4L5 1316 aa18.73■□□□□ 0.59
PRAMEF25-202ENST00000619661 LTKP29376 864 aa18.72■□□□□ 0.59
PRAMEF25-202ENST00000619661 XRN1Q8IZH2 1706 aaKnown RBP18.72■□□□□ 0.59
PRAMEF25-202ENST00000619661 NBR1Q14596 966 aa18.72■□□□□ 0.59
PRAMEF25-202ENST00000619661 ZBTB40Q9NUA8 1239 aa18.72■□□□□ 0.59
PRAMEF25-202ENST00000619661 ZRANB1Q9UGI0 708 aa18.72■□□□□ 0.59
PRAMEF25-202ENST00000619661 TBX22Q9Y458 520 aa18.72■□□□□ 0.59
PRAMEF25-202ENST00000619661 FER1L4A9Z1Z3 1794 aa18.71■□□□□ 0.59
PRAMEF25-202ENST00000619661 CHMP4BQ9H444 224 aaKnown RBP18.71■□□□□ 0.59
PRAMEF25-202ENST00000619661 FBLN1P23142 703 aa18.7■□□□□ 0.58
PRAMEF25-202ENST00000619661 SMC5Q8IY18 1101 aa18.7■□□□□ 0.58
PRAMEF25-202ENST00000619661 EID1Q9Y6B2 187 aa18.7■□□□□ 0.58
PRAMEF25-202ENST00000619661 NCKAP5LQ9HCH0 1330 aa18.7■□□□□ 0.58
PRAMEF25-202ENST00000619661 TTC21AQ8NDW8 1320 aa18.69■□□□□ 0.58
PRAMEF25-202ENST00000619661 VAMP4O75379 141 aa18.69■□□□□ 0.58
PRAMEF25-202ENST00000619661 HMOX1P09601 288 aa18.69■□□□□ 0.58
PRAMEF25-202ENST00000619661 ITPRIPQ8IWB1 547 aa18.69■□□□□ 0.58
PRAMEF25-202ENST00000619661 TMEM57Q8N5G2 664 aa18.69■□□□□ 0.58
PRAMEF25-202ENST00000619661 PEAK1Q9H792 1746 aa18.69■□□□□ 0.58
PRAMEF25-202ENST00000619661 ACEP12821 1306 aa18.68■□□□□ 0.58
PRAMEF25-202ENST00000619661 USP54Q70EL1 1684 aa18.68■□□□□ 0.58
PRAMEF25-202ENST00000619661 CFAP44Q96MT7 982 aa18.68■□□□□ 0.58
PRAMEF25-202ENST00000619661 MRPL50Q8N5N7 158 aaKnown RBP18.67■□□□□ 0.58
PRAMEF25-202ENST00000619661 KIF24Q5T7B8 1368 aa18.67■□□□□ 0.58
PRAMEF25-202ENST00000619661 DEKP35659 375 aaKnown RBP18.67■□□□□ 0.58
PRAMEF25-202ENST00000619661 DAXXQ9UER7 740 aaPredicted RBP18.67■□□□□ 0.58
PRAMEF25-202ENST00000619661 ANKARQ7Z5J8 1434 aa18.67■□□□□ 0.58
PRAMEF25-202ENST00000619661 FMN2Q9NZ56 1722 aa18.66■□□□□ 0.58
PRAMEF25-202ENST00000619661 RRS1Q15050 365 aaKnown RBP18.65■□□□□ 0.58
PRAMEF25-202ENST00000619661 ABCC4O15439 1325 aa18.65■□□□□ 0.58
PRAMEF25-202ENST00000619661 MBIPQ9NS73 344 aa18.65■□□□□ 0.58
PRAMEF25-202ENST00000619661 ARHGEF10O15013 1369 aa18.64■□□□□ 0.58
PRAMEF25-202ENST00000619661 EIF4A2Q14240 407 aaKnown RBP18.64■□□□□ 0.57
PRAMEF25-202ENST00000619661 LAS1LQ9Y4W2 734 aaKnown RBP18.63■□□□□ 0.57
PRAMEF25-202ENST00000619661 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
PRAMEF25-202ENST00000619661 THEMISQ8N1K5 641 aaPredicted RBP18.62■□□□□ 0.57
PRAMEF25-202ENST00000619661 TBC1D32Q96NH3 1257 aa18.62■□□□□ 0.57
PRAMEF25-202ENST00000619661 UPF2Q9HAU5 1272 aaKnown RBP18.62■□□□□ 0.57
PRAMEF25-202ENST00000619661 KIAA0232Q92628 1395 aa18.61■□□□□ 0.57
PRAMEF25-202ENST00000619661 SEC24BO95487 1268 aa18.61■□□□□ 0.57
PRAMEF25-202ENST00000619661 THUMPD2Q9BTF0 503 aaKnown RBP18.61■□□□□ 0.57
PRAMEF25-202ENST00000619661 AMOTL2Q9Y2J4 779 aa18.61■□□□□ 0.57
PRAMEF25-202ENST00000619661 NUCB1Q02818 461 aa18.6■□□□□ 0.57
PRAMEF25-202ENST00000619661 TWISTNBQ3B726 338 aaPredicted RBP18.6■□□□□ 0.57
PRAMEF25-202ENST00000619661 API5Q9BZZ5 524 aaKnown RBP18.6■□□□□ 0.57
PRAMEF25-202ENST00000619661 PIK3C2AO00443 1686 aa18.6■□□□□ 0.57
PRAMEF25-202ENST00000619661 SBNO1A3KN83 1393 aa18.59■□□□□ 0.57
PRAMEF25-202ENST00000619661 ZBTB7BO15156 539 aaPredicted RBP18.59■□□□□ 0.57
PRAMEF25-202ENST00000619661 BECN1Q14457 450 aa18.59■□□□□ 0.57
PRAMEF25-202ENST00000619661 TSPYL6Q8N831 410 aa18.59■□□□□ 0.57
PRAMEF25-202ENST00000619661 KDRP35968 1356 aa18.59■□□□□ 0.57
PRAMEF25-202ENST00000619661 FLT4P35916 1363 aa18.58■□□□□ 0.56
PRAMEF25-202ENST00000619661 CEBPAP49715 358 aaPredicted RBP18.58■□□□□ 0.56
PRAMEF25-202ENST00000619661 SLC26A8Q96RN1 970 aa18.58■□□□□ 0.56
PRAMEF25-202ENST00000619661 CEP170BQ9Y4F5 1589 aaPredicted RBP18.57■□□□□ 0.56
PRAMEF25-202ENST00000619661 GCC1Q96CN9 775 aa18.57■□□□□ 0.56
PRAMEF25-202ENST00000619661 CHL1O00533 1208 aa18.56■□□□□ 0.56
PRAMEF25-202ENST00000619661 SULT6B1Q6IMI4 303 aa18.56■□□□□ 0.56
PRAMEF25-202ENST00000619661 C8orf58Q8NAV2 365 aa18.56■□□□□ 0.56
PRAMEF25-202ENST00000619661 MARF1Q9Y4F3 1742 aaKnown RBP18.55■□□□□ 0.56
PRAMEF25-202ENST00000619661 CRB1P82279 1406 aa18.55■□□□□ 0.56
PRAMEF25-202ENST00000619661 AEBP1Q8IUX7 1158 aa18.55■□□□□ 0.56
PRAMEF25-202ENST00000619661 LRRC37A3O60309 1634 aa18.54■□□□□ 0.56
PRAMEF25-202ENST00000619661 SLC4A3P48751 1232 aa18.54■□□□□ 0.56
PRAMEF25-202ENST00000619661 ZNF142P52746 1687 aaPredicted RBP18.54■□□□□ 0.56
PRAMEF25-202ENST00000619661 RGPD8O14715 1765 aaPredicted RBP18.54■□□□□ 0.56
PRAMEF25-202ENST00000619661 NFKBIBQ15653 356 aa18.53■□□□□ 0.56
PRAMEF25-202ENST00000619661 MAP3K19Q56UN5 1328 aa18.53■□□□□ 0.56
PRAMEF25-202ENST00000619661 CHD1LQ86WJ1 897 aa18.53■□□□□ 0.56
PRAMEF25-202ENST00000619661 RGS12O14924 1447 aa18.52■□□□□ 0.56
PRAMEF25-202ENST00000619661 IGSF1Q8N6C5 1336 aa18.52■□□□□ 0.56
PRAMEF25-202ENST00000619661 FAM83GA6ND36 823 aa18.52■□□□□ 0.56
PRAMEF25-202ENST00000619661 HSP90AB2PQ58FF8 381 aa18.52■□□□□ 0.56
PRAMEF25-202ENST00000619661 INTS3Q68E01 1043 aaKnown RBP18.52■□□□□ 0.56
PRAMEF25-202ENST00000619661 LMTK3Q96Q04 1460 aa18.51■□□□□ 0.55
PRAMEF25-202ENST00000619661 PTPRCP08575 1304 aa18.5■□□□□ 0.55
PRAMEF25-202ENST00000619661 HTATSF1O43719 755 aaKnown RBP18.49■□□□□ 0.55
PRAMEF25-202ENST00000619661 BMP2KLQ5H9B9 411 aa18.49■□□□□ 0.55
PRAMEF25-202ENST00000619661 DCTN1Q14203 1278 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms