RNA–Protein interactions for RNA: ENST00000618829.4

SYNRG-224, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 3,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-224ENST00000618829 IDI1Q13907 227 aa9.07□□□□□ -0.96
SYNRG-224ENST00000618829 PCDHB15Q9Y5E8 787 aa9.07□□□□□ -0.96
SYNRG-224ENST00000618829 VSIG10Q8N0Z9 540 aa9.06□□□□□ -0.96
SYNRG-224ENST00000618829 IL27Q8NEV9 243 aa9.06□□□□□ -0.96
SYNRG-224ENST00000618829 FAM135BQ49AJ0 1406 aa9.06□□□□□ -0.96
SYNRG-224ENST00000618829 NINLQ9Y2I6 1382 aa9.06□□□□□ -0.96
SYNRG-224ENST00000618829 SMC4Q9NTJ3 1288 aa9.06□□□□□ -0.96
SYNRG-224ENST00000618829 PDZRN3Q9UPQ7 1066 aa9.06□□□□□ -0.96
SYNRG-224ENST00000618829 FRAT2O75474 233 aaPredicted RBP9.05□□□□□ -0.96
SYNRG-224ENST00000618829 RWDD1Q9H446 243 aaPredicted RBP9.05□□□□□ -0.96
SYNRG-224ENST00000618829 UPF2Q9HAU5 1272 aaKnown RBP9.05□□□□□ -0.96
SYNRG-224ENST00000618829 GSE1Q14687 1217 aa9.05□□□□□ -0.96
SYNRG-224ENST00000618829 SLKQ9H2G2 1235 aaPredicted RBP9.05□□□□□ -0.96
SYNRG-224ENST00000618829 ANKRD36BQ8N2N9 1353 aa9.05□□□□□ -0.96
SYNRG-224ENST00000618829 EXOSC9Q06265 439 aaKnown RBP9.05□□□□□ -0.96
SYNRG-224ENST00000618829 ZKSCAN2Q63HK3 967 aa9.05□□□□□ -0.96
SYNRG-224ENST00000618829 PRAM1Q96QH2 718 aa9.04□□□□□ -0.96
SYNRG-224ENST00000618829 ITPRIPQ8IWB1 547 aa9.04□□□□□ -0.96
SYNRG-224ENST00000618829 BECN1Q14457 450 aa9.04□□□□□ -0.96
SYNRG-224ENST00000618829 DZIP1LQ8IYY4 767 aaKnown RBP9.04□□□□□ -0.96
SYNRG-224ENST00000618829 COL16A1Q07092 1604 aaPredicted RBP9.03□□□□□ -0.96
SYNRG-224ENST00000618829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.03□□□□□ -0.96
SYNRG-224ENST00000618829 TERF2IPQ9NYB0 399 aa9.03□□□□□ -0.96
SYNRG-224ENST00000618829 SPRYD3Q8NCJ5 442 aa9.03□□□□□ -0.96
SYNRG-224ENST00000618829 A0A1W2PP64 1363 aa9.03□□□□□ -0.96
SYNRG-224ENST00000618829 TMPOP42166 694 aaKnown RBP9.03□□□□□ -0.96
SYNRG-224ENST00000618829 RIPK4P57078 832 aa9.03□□□□□ -0.96
SYNRG-224ENST00000618829 MVPQ14764 893 aaKnown RBP9.03□□□□□ -0.96
SYNRG-224ENST00000618829 CCDC27Q2M243 656 aa9.02□□□□□ -0.97
SYNRG-224ENST00000618829 FBXO31Q5XUX0 539 aaPredicted RBP9.02□□□□□ -0.97
SYNRG-224ENST00000618829 HDGFL2Q7Z4V5 671 aaPredicted RBP9.02□□□□□ -0.97
SYNRG-224ENST00000618829 RGPD3A6NKT7 1758 aaPredicted RBP9.02□□□□□ -0.97
SYNRG-224ENST00000618829 RGPD4Q7Z3J3 1758 aa9.02□□□□□ -0.97
SYNRG-224ENST00000618829 NFAT5O94916 1531 aa9.02□□□□□ -0.97
SYNRG-224ENST00000618829 FBLN1P23142 703 aa9.01□□□□□ -0.97
SYNRG-224ENST00000618829 USP19O94966 1318 aa9.01□□□□□ -0.97
SYNRG-224ENST00000618829 MAP2P11137 1827 aaKnown RBP9.01□□□□□ -0.97
SYNRG-224ENST00000618829 NSD2O96028 1365 aa9.01□□□□□ -0.97
SYNRG-224ENST00000618829 FYB1O15117 783 aa9.01□□□□□ -0.97
SYNRG-224ENST00000618829 DIAPH1O60610 1272 aaKnown RBP9.01□□□□□ -0.97
SYNRG-224ENST00000618829 SSH1Q8WYL5 1049 aa9.01□□□□□ -0.97
SYNRG-224ENST00000618829 PTPRUQ92729 1446 aa9.01□□□□□ -0.97
SYNRG-224ENST00000618829 C14orf37Q86TY3 774 aa9□□□□□ -0.97
SYNRG-224ENST00000618829 DNAJC5Q9H3Z4 198 aa9□□□□□ -0.97
SYNRG-224ENST00000618829 CABP1Q9NZU7 370 aa9□□□□□ -0.97
SYNRG-224ENST00000618829 BRPF3Q9ULD4 1205 aa9□□□□□ -0.97
SYNRG-224ENST00000618829 NOB1Q9ULX3 412 aaKnown RBP9□□□□□ -0.97
SYNRG-224ENST00000618829 RGPD2P0DJD1 1756 aa9□□□□□ -0.97
SYNRG-224ENST00000618829 CDK19Q9BWU1 502 aa9□□□□□ -0.97
SYNRG-224ENST00000618829 SLC52A1Q9NWF4 448 aa9□□□□□ -0.97
SYNRG-224ENST00000618829 TRIM27P14373 513 aa9□□□□□ -0.97
SYNRG-224ENST00000618829 MFAP1P55081 439 aaKnown RBP9□□□□□ -0.97
SYNRG-224ENST00000618829 AAMPQ13685 434 aa9□□□□□ -0.97
SYNRG-224ENST00000618829 C5P01031 1676 aa9□□□□□ -0.97
SYNRG-224ENST00000618829 QSER1Q2KHR3 1735 aa8.99□□□□□ -0.97
SYNRG-224ENST00000618829 MLECQ14165 292 aa8.99□□□□□ -0.97
SYNRG-224ENST00000618829 PUS7Q96PZ0 661 aaKnown RBP8.99□□□□□ -0.97
SYNRG-224ENST00000618829 TRIM35Q9UPQ4 493 aa8.99□□□□□ -0.97
SYNRG-224ENST00000618829 RGPD5Q99666 1765 aa8.99□□□□□ -0.97
SYNRG-224ENST00000618829 A0A1B0GUL6 1792 aa8.98□□□□□ -0.97
SYNRG-224ENST00000618829 LAMB4A4D0S4 1761 aa8.98□□□□□ -0.97
SYNRG-224ENST00000618829 HMOX1P09601 288 aa8.98□□□□□ -0.97
SYNRG-224ENST00000618829 ATF7IPQ6VMQ6 1270 aa8.98□□□□□ -0.97
SYNRG-224ENST00000618829 PLEKHF1Q96S99 279 aa8.98□□□□□ -0.97
SYNRG-224ENST00000618829 DDX19BQ9UMR2 479 aa8.98□□□□□ -0.97
SYNRG-224ENST00000618829 ABCC11Q96J66 1382 aa8.98□□□□□ -0.97
SYNRG-224ENST00000618829 AHDC1Q5TGY3 1603 aaPredicted RBP8.98□□□□□ -0.97
SYNRG-224ENST00000618829 WAPLQ7Z5K2 1190 aa8.98□□□□□ -0.97
SYNRG-224ENST00000618829 ATAD2Q6PL18 1390 aa8.98□□□□□ -0.97
SYNRG-224ENST00000618829 ELL2O00472 640 aaPredicted RBP8.98□□□□□ -0.97
SYNRG-224ENST00000618829 TMEM57Q8N5G2 664 aa8.98□□□□□ -0.97
SYNRG-224ENST00000618829 NWD2Q9ULI1 1742 aa8.97□□□□□ -0.97
SYNRG-224ENST00000618829 PRKAR2BP31323 418 aa8.97□□□□□ -0.97
SYNRG-224ENST00000618829 PNNQ9H307 717 aaKnown RBP8.97□□□□□ -0.97
SYNRG-224ENST00000618829 ATP7BP35670 1465 aa8.97□□□□□ -0.97
SYNRG-224ENST00000618829 CFAP44Q96MT7 982 aa8.97□□□□□ -0.97
SYNRG-224ENST00000618829 IPO8O15397 1037 aaKnown RBP8.97□□□□□ -0.97
SYNRG-224ENST00000618829 CYB5RLQ6IPT4 315 aa8.97□□□□□ -0.97
SYNRG-224ENST00000618829 THUMPD2Q9BTF0 503 aaKnown RBP8.97□□□□□ -0.97
SYNRG-224ENST00000618829 CT47B1P0C2W7 299 aaPredicted RBP8.96□□□□□ -0.97
SYNRG-224ENST00000618829 TBC1D32Q96NH3 1257 aa8.96□□□□□ -0.97
SYNRG-224ENST00000618829 YTHDC2Q9H6S0 1430 aaKnown RBP8.96□□□□□ -0.98
SYNRG-224ENST00000618829 SCN11AQ9UI33 1791 aa8.96□□□□□ -0.98
SYNRG-224ENST00000618829 TBC1D2Q9BYX2 928 aa8.95□□□□□ -0.98
SYNRG-224ENST00000618829 ZNF646O15015 1829 aaPredicted RBP8.95□□□□□ -0.98
SYNRG-224ENST00000618829 CPSF1Q10570 1443 aaKnown RBP8.95□□□□□ -0.98
SYNRG-224ENST00000618829 NCOA3Q9Y6Q9 1424 aa8.95□□□□□ -0.98
SYNRG-224ENST00000618829 C22orf23Q9BZE7 217 aa8.95□□□□□ -0.98
SYNRG-224ENST00000618829 LNPKQ9C0E8 428 aa8.95□□□□□ -0.98
SYNRG-224ENST00000618829 ROBO1Q9Y6N7 1651 aa8.95□□□□□ -0.98
SYNRG-224ENST00000618829 KIF16BQ96L93 1317 aa8.94□□□□□ -0.98
SYNRG-224ENST00000618829 C1orf115Q9H7X2 142 aa8.94□□□□□ -0.98
SYNRG-224ENST00000618829 TOGARAM1Q9Y4F4 1720 aa8.94□□□□□ -0.98
SYNRG-224ENST00000618829 EMILIN1Q9Y6C2 1016 aa8.94□□□□□ -0.98
SYNRG-224ENST00000618829 NUP188Q5SRE5 1749 aa8.94□□□□□ -0.98
SYNRG-224ENST00000618829 FCHSD2O94868 740 aa8.93□□□□□ -0.98
SYNRG-224ENST00000618829 FAM69CQ0P6D2 419 aa8.93□□□□□ -0.98
SYNRG-224ENST00000618829 PHACTR3Q96KR7 559 aa8.93□□□□□ -0.98
SYNRG-224ENST00000618829 POLKQ9UBT6 870 aa8.93□□□□□ -0.98
SYNRG-224ENST00000618829 HDAC1Q13547 482 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms