RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 HSP90AB1P08238 724 aaKnown RBP25.51■■□□□ 1.67
NEK3-208ENST00000618534 FBXO31Q5XUX0 539 aaPredicted RBP25.51■■□□□ 1.67
NEK3-208ENST00000618534 MAP2P11137 1827 aaKnown RBP25.5■■□□□ 1.67
NEK3-208ENST00000618534 ARHGAP45Q92619 1136 aa25.5■■□□□ 1.67
NEK3-208ENST00000618534 ELL2O00472 640 aaPredicted RBP25.49■■□□□ 1.67
NEK3-208ENST00000618534 TNPO1Q92973 898 aaKnown RBP25.49■■□□□ 1.67
NEK3-208ENST00000618534 SIRT2Q8IXJ6 389 aa25.49■■□□□ 1.67
NEK3-208ENST00000618534 ATP7BP35670 1465 aa25.48■■□□□ 1.67
NEK3-208ENST00000618534 TBC1D9Q6ZT07 1266 aa25.48■■□□□ 1.67
NEK3-208ENST00000618534 CHMP4BQ9H444 224 aaKnown RBP25.48■■□□□ 1.67
NEK3-208ENST00000618534 MBIPQ9NS73 344 aa25.48■■□□□ 1.67
NEK3-208ENST00000618534 EMILIN1Q9Y6C2 1016 aa25.48■■□□□ 1.67
NEK3-208ENST00000618534 ABCC4O15439 1325 aa25.47■■□□□ 1.67
NEK3-208ENST00000618534 MRE11P49959 708 aa25.47■■□□□ 1.67
NEK3-208ENST00000618534 GNAI1P63096 354 aa25.47■■□□□ 1.67
NEK3-208ENST00000618534 CALD1Q05682 793 aaKnown RBP25.47■■□□□ 1.67
NEK3-208ENST00000618534 IFT57Q9NWB7 429 aa25.47■■□□□ 1.67
NEK3-208ENST00000618534 CD2BP2O95400 341 aaKnown RBP25.47■■□□□ 1.67
NEK3-208ENST00000618534 WAPLQ7Z5K2 1190 aa25.47■■□□□ 1.67
NEK3-208ENST00000618534 CIZ1Q9ULV3 898 aaPredicted RBP25.46■■□□□ 1.67
NEK3-208ENST00000618534 ZNF853P0CG23 659 aa25.45■■□□□ 1.66
NEK3-208ENST00000618534 IL13P35225 146 aa25.44■■□□□ 1.66
NEK3-208ENST00000618534 RAB3GAP1Q15042 981 aa25.44■■□□□ 1.66
NEK3-208ENST00000618534 GRPEL1Q9HAV7 217 aa25.44■■□□□ 1.66
NEK3-208ENST00000618534 TWISTNBQ3B726 338 aaPredicted RBP25.43■■□□□ 1.66
NEK3-208ENST00000618534 FOXD4L1Q9NU39 408 aa25.43■■□□□ 1.66
NEK3-208ENST00000618534 STAG3Q9UJ98 1225 aa25.43■■□□□ 1.66
NEK3-208ENST00000618534 RBM42Q9BTD8 480 aaKnown RBP25.42■■□□□ 1.66
NEK3-208ENST00000618534 GBP4Q96PP9 640 aa25.42■■□□□ 1.66
NEK3-208ENST00000618534 HSP90AA1P07900 732 aaKnown RBP25.41■■□□□ 1.66
NEK3-208ENST00000618534 C8orf58Q8NAV2 365 aa25.41■■□□□ 1.66
NEK3-208ENST00000618534 DLC1Q96QB1 1528 aa25.41■■□□□ 1.66
NEK3-208ENST00000618534 NME9Q86XW9 330 aa25.41■■□□□ 1.66
NEK3-208ENST00000618534 OSCARQ8IYS5 282 aa25.41■■□□□ 1.66
NEK3-208ENST00000618534 DLG5Q8TDM6 1919 aa25.4■■□□□ 1.66
NEK3-208ENST00000618534 CDK12Q9NYV4 1490 aaPredicted RBP25.4■■□□□ 1.66
NEK3-208ENST00000618534 K7ELQ4 463 aaPredicted RBP25.4■■□□□ 1.66
NEK3-208ENST00000618534 ZRANB1Q9UGI0 708 aa25.4■■□□□ 1.66
NEK3-208ENST00000618534 KNDC1Q76NI1 1749 aa25.38■■□□□ 1.65
NEK3-208ENST00000618534 REREQ9P2R6 1566 aa25.38■■□□□ 1.65
NEK3-208ENST00000618534 EDC4Q6P2E9 1401 aaKnown RBP25.38■■□□□ 1.65
NEK3-208ENST00000618534 CFAP44Q96MT7 982 aa25.38■■□□□ 1.65
NEK3-208ENST00000618534 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
NEK3-208ENST00000618534 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
NEK3-208ENST00000618534 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
NEK3-208ENST00000618534 CDC45O75419 566 aa25.37■■□□□ 1.65
NEK3-208ENST00000618534 API5Q9BZZ5 524 aaKnown RBP25.37■■□□□ 1.65
NEK3-208ENST00000618534 ISY1Q9ULR0 285 aaKnown RBP25.37■■□□□ 1.65
NEK3-208ENST00000618534 CPSF1Q10570 1443 aaKnown RBP25.37■■□□□ 1.65
NEK3-208ENST00000618534 FAM83GA6ND36 823 aa25.37■■□□□ 1.65
NEK3-208ENST00000618534 GSPT1P15170 499 aaKnown RBP25.37■■□□□ 1.65
NEK3-208ENST00000618534 RIMS2Q9UQ26 1411 aa25.37■■□□□ 1.65
NEK3-208ENST00000618534 SETD1AO15047 1707 aaKnown RBP25.35■■□□□ 1.65
NEK3-208ENST00000618534 GAS2L2Q8NHY3 880 aa25.35■■□□□ 1.65
NEK3-208ENST00000618534 CLCN1P35523 988 aa25.35■■□□□ 1.65
NEK3-208ENST00000618534 LMOD3Q0VAK6 560 aa25.35■■□□□ 1.65
NEK3-208ENST00000618534 GAS2L3Q86XJ1 694 aa25.35■■□□□ 1.65
NEK3-208ENST00000618534 DCTN1Q14203 1278 aa25.34■■□□□ 1.65
NEK3-208ENST00000618534 RRS1Q15050 365 aaKnown RBP25.33■■□□□ 1.65
NEK3-208ENST00000618534 PLEKHM2Q8IWE5 1019 aa25.33■■□□□ 1.65
NEK3-208ENST00000618534 AATKQ6ZMQ8 1374 aa25.33■■□□□ 1.65
NEK3-208ENST00000618534 SSFA2P28290 1259 aa25.32■■□□□ 1.64
NEK3-208ENST00000618534 SKOR2Q2VWA4 1001 aaPredicted RBP25.32■■□□□ 1.64
NEK3-208ENST00000618534 A2ML1A8K2U0 1454 aa25.32■■□□□ 1.64
NEK3-208ENST00000618534 WASLO00401 505 aaPredicted RBP25.31■■□□□ 1.64
NEK3-208ENST00000618534 CPS1P31327 1500 aa25.3■■□□□ 1.64
NEK3-208ENST00000618534 PTMSP20962 102 aa25.3■■□□□ 1.64
NEK3-208ENST00000618534 DCTPP1Q9H773 170 aa25.3■■□□□ 1.64
NEK3-208ENST00000618534 KIF24Q5T7B8 1368 aa25.3■■□□□ 1.64
NEK3-208ENST00000618534 COG3Q96JB2 828 aa25.29■■□□□ 1.64
NEK3-208ENST00000618534 NCKAP5LQ9HCH0 1330 aa25.29■■□□□ 1.64
NEK3-208ENST00000618534 TTC22Q5TAA0 569 aa25.28■■□□□ 1.64
NEK3-208ENST00000618534 C16orf71Q8IYS4 520 aaPredicted RBP25.28■■□□□ 1.64
NEK3-208ENST00000618534 ATP10DQ9P241 1426 aa25.26■■□□□ 1.63
NEK3-208ENST00000618534 INTS3Q68E01 1043 aaKnown RBP25.26■■□□□ 1.63
NEK3-208ENST00000618534 ERBB4Q15303 1308 aa25.26■■□□□ 1.63
NEK3-208ENST00000618534 MON2Q7Z3U7 1717 aa25.26■■□□□ 1.63
NEK3-208ENST00000618534 KRT24Q2M2I5 525 aa25.25■■□□□ 1.63
NEK3-208ENST00000618534 NUDT16Q96DE0 195 aaKnown RBP25.25■■□□□ 1.63
NEK3-208ENST00000618534 NAP1L5Q96NT1 182 aaPredicted RBP25.25■■□□□ 1.63
NEK3-208ENST00000618534 RGS12O14924 1447 aa25.24■■□□□ 1.63
NEK3-208ENST00000618534 RABEP1Q15276 862 aa25.24■■□□□ 1.63
NEK3-208ENST00000618534 OTUD7AQ8TE49 926 aaPredicted RBP25.24■■□□□ 1.63
NEK3-208ENST00000618534 ESPNB1AK53 854 aa25.24■■□□□ 1.63
NEK3-208ENST00000618534 ANKRD44Q8N8A2 993 aa25.24■■□□□ 1.63
NEK3-208ENST00000618534 CLEC17AQ6ZS10 378 aa25.23■■□□□ 1.63
NEK3-208ENST00000618534 AK9Q5TCS8 1911 aa25.23■■□□□ 1.63
NEK3-208ENST00000618534 BAG4O95429 457 aaKnown RBP25.23■■□□□ 1.63
NEK3-208ENST00000618534 TXNDC2Q86VQ3 553 aa25.23■■□□□ 1.63
NEK3-208ENST00000618534 AEBP1Q8IUX7 1158 aa25.23■■□□□ 1.63
NEK3-208ENST00000618534 NRXN3Q9Y4C0 1643 aa25.23■■□□□ 1.63
NEK3-208ENST00000618534 GOLGA6L22H0YM25 854 aa25.22■■□□□ 1.63
NEK3-208ENST00000618534 METP08581 1390 aa25.22■■□□□ 1.63
NEK3-208ENST00000618534 USP26Q9BXU7 913 aa25.22■■□□□ 1.63
NEK3-208ENST00000618534 C3P01024 1663 aa25.21■■□□□ 1.63
NEK3-208ENST00000618534 SPATA31D1Q6ZQQ2 1576 aa25.21■■□□□ 1.63
NEK3-208ENST00000618534 CEP85Q6P2H3 762 aa25.21■■□□□ 1.63
NEK3-208ENST00000618534 MSH6P52701 1360 aa25.2■■□□□ 1.62
NEK3-208ENST00000618534 CCDC61Q9Y6R9 512 aa25.2■■□□□ 1.62
NEK3-208ENST00000618534 NRKQ7Z2Y5 1582 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 1767 ms