RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 ITSN1Q15811 1721 aa10.02□□□□□ -0.81
CHD7-212ENST00000618450 VGFO15240 615 aaPredicted RBP10.01□□□□□ -0.81
CHD7-212ENST00000618450 FCHSD2O94868 740 aa10.01□□□□□ -0.81
CHD7-212ENST00000618450 GSPT1P15170 499 aaKnown RBP10.01□□□□□ -0.81
CHD7-212ENST00000618450 ISY1Q9ULR0 285 aaKnown RBP10.01□□□□□ -0.81
CHD7-212ENST00000618450 CIZ1Q9ULV3 898 aaPredicted RBP10.01□□□□□ -0.81
CHD7-212ENST00000618450 FMN2Q9NZ56 1722 aa10.01□□□□□ -0.81
CHD7-212ENST00000618450 CFAP53Q96M91 514 aa10.01□□□□□ -0.81
CHD7-212ENST00000618450 GGNBP2Q9H3C7 697 aa10.01□□□□□ -0.81
CHD7-212ENST00000618450 SMC4Q9NTJ3 1288 aa10.01□□□□□ -0.81
CHD7-212ENST00000618450 KIF16BQ96L93 1317 aa10.01□□□□□ -0.81
CHD7-212ENST00000618450 A2ML1A8K2U0 1454 aa10.01□□□□□ -0.81
CHD7-212ENST00000618450 TSPYL6Q8N831 410 aa10.01□□□□□ -0.81
CHD7-212ENST00000618450 IL13P35225 146 aa10□□□□□ -0.81
CHD7-212ENST00000618450 AGLP35573 1532 aa10□□□□□ -0.81
CHD7-212ENST00000618450 TECPR2O15040 1411 aa10□□□□□ -0.81
CHD7-212ENST00000618450 USP54Q70EL1 1684 aa10□□□□□ -0.81
CHD7-212ENST00000618450 CANXP27824 592 aaKnown RBP9.99□□□□□ -0.81
CHD7-212ENST00000618450 MRE11P49959 708 aa9.99□□□□□ -0.81
CHD7-212ENST00000618450 FAM208AQ9UK61 1670 aaKnown RBP9.99□□□□□ -0.81
CHD7-212ENST00000618450 MFAP1P55081 439 aaKnown RBP9.99□□□□□ -0.81
CHD7-212ENST00000618450 PPP1R9BQ96SB3 815 aa9.99□□□□□ -0.81
CHD7-212ENST00000618450 GRPEL1Q9HAV7 217 aa9.99□□□□□ -0.81
CHD7-212ENST00000618450 GOLGA6L3A6NEY3 463 aa9.99□□□□□ -0.81
CHD7-212ENST00000618450 RIPK4P57078 832 aa9.99□□□□□ -0.81
CHD7-212ENST00000618450 TBC1D9Q6ZT07 1266 aa9.99□□□□□ -0.81
CHD7-212ENST00000618450 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.99□□□□□ -0.81
CHD7-212ENST00000618450 IL17RAQ96F46 866 aa9.99□□□□□ -0.81
CHD7-212ENST00000618450 SLC52A1Q9NWF4 448 aa9.98□□□□□ -0.81
CHD7-212ENST00000618450 RBM42Q9BTD8 480 aaKnown RBP9.98□□□□□ -0.81
CHD7-212ENST00000618450 EDC4Q6P2E9 1401 aaKnown RBP9.97□□□□□ -0.81
CHD7-212ENST00000618450 ITPRIPQ8IWB1 547 aa9.97□□□□□ -0.81
CHD7-212ENST00000618450 GAS2L2Q8NHY3 880 aa9.97□□□□□ -0.81
CHD7-212ENST00000618450 GCC1Q96CN9 775 aa9.97□□□□□ -0.81
CHD7-212ENST00000618450 UPF2Q9HAU5 1272 aaKnown RBP9.97□□□□□ -0.81
CHD7-212ENST00000618450 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.97□□□□□ -0.81
CHD7-212ENST00000618450 RIMS1Q86UR5 1692 aaKnown RBP9.96□□□□□ -0.81
CHD7-212ENST00000618450 PLEKHM2Q8IWE5 1019 aa9.96□□□□□ -0.81
CHD7-212ENST00000618450 FTSJ3Q8IY81 847 aaKnown RBP9.96□□□□□ -0.81
CHD7-212ENST00000618450 FBLN1P23142 703 aa9.96□□□□□ -0.81
CHD7-212ENST00000618450 SALL3Q9BXA9 1300 aa9.96□□□□□ -0.81
CHD7-212ENST00000618450 DDX11L8A8MPP1 907 aa9.96□□□□□ -0.82
CHD7-212ENST00000618450 DIAPH1O60610 1272 aaKnown RBP9.96□□□□□ -0.82
CHD7-212ENST00000618450 SPRYD3Q8NCJ5 442 aa9.96□□□□□ -0.82
CHD7-212ENST00000618450 PRAM1Q96QH2 718 aa9.96□□□□□ -0.82
CHD7-212ENST00000618450 MBIPQ9NS73 344 aa9.96□□□□□ -0.82
CHD7-212ENST00000618450 IFT57Q9NWB7 429 aa9.96□□□□□ -0.82
CHD7-212ENST00000618450 ZDHHC9Q9Y397 364 aa9.96□□□□□ -0.82
CHD7-212ENST00000618450 RIMS2Q9UQ26 1411 aa9.96□□□□□ -0.82
CHD7-212ENST00000618450 LNPKQ9C0E8 428 aa9.96□□□□□ -0.82
CHD7-212ENST00000618450 SSH2Q76I76 1423 aa9.96□□□□□ -0.82
CHD7-212ENST00000618450 NFE2L2Q16236 605 aa9.95□□□□□ -0.82
CHD7-212ENST00000618450 NUTM2DQ5VT03 806 aaPredicted RBP9.95□□□□□ -0.82
CHD7-212ENST00000618450 CRB1P82279 1406 aa9.95□□□□□ -0.82
CHD7-212ENST00000618450 DCTPP1Q9H773 170 aa9.95□□□□□ -0.82
CHD7-212ENST00000618450 INTS3Q68E01 1043 aaKnown RBP9.95□□□□□ -0.82
CHD7-212ENST00000618450 KIAA0232Q92628 1395 aa9.95□□□□□ -0.82
CHD7-212ENST00000618450 GGT6Q6P531 493 aa9.94□□□□□ -0.82
CHD7-212ENST00000618450 C8orf58Q8NAV2 365 aa9.94□□□□□ -0.82
CHD7-212ENST00000618450 PDLIM2Q96JY6 352 aa9.94□□□□□ -0.82
CHD7-212ENST00000618450 CDK19Q9BWU1 502 aa9.94□□□□□ -0.82
CHD7-212ENST00000618450 CACNA1FO60840 1977 aa9.94□□□□□ -0.82
CHD7-212ENST00000618450 RAPGEF3O95398 923 aa9.94□□□□□ -0.82
CHD7-212ENST00000618450 USP26Q9BXU7 913 aa9.94□□□□□ -0.82
CHD7-212ENST00000618450 K7ELQ4 463 aaPredicted RBP9.93□□□□□ -0.82
CHD7-212ENST00000618450 CABP1Q9NZU7 370 aa9.93□□□□□ -0.82
CHD7-212ENST00000618450 OVOS2A0A0J9YW53 1432 aa9.93□□□□□ -0.82
CHD7-212ENST00000618450 OVOS2Q6IE36 1432 aa9.93□□□□□ -0.82
CHD7-212ENST00000618450 PRKAR2BP31323 418 aa9.93□□□□□ -0.82
CHD7-212ENST00000618450 ZNF445P59923 1031 aa9.93□□□□□ -0.82
CHD7-212ENST00000618450 NWD1Q149M9 1564 aa9.93□□□□□ -0.82
CHD7-212ENST00000618450 UBR1Q8IWV7 1749 aa9.93□□□□□ -0.82
CHD7-212ENST00000618450 CFAP44Q96MT7 982 aa9.93□□□□□ -0.82
CHD7-212ENST00000618450 GZF1Q9H116 711 aaPredicted RBP9.93□□□□□ -0.82
CHD7-212ENST00000618450 ESPNB1AK53 854 aa9.92□□□□□ -0.82
CHD7-212ENST00000618450 IPO8O15397 1037 aaKnown RBP9.92□□□□□ -0.82
CHD7-212ENST00000618450 LMBRD1Q9NUN5 540 aa9.92□□□□□ -0.82
CHD7-212ENST00000618450 KLHL40Q2TBA0 621 aa9.92□□□□□ -0.82
CHD7-212ENST00000618450 THUMPD2Q9BTF0 503 aaKnown RBP9.92□□□□□ -0.82
CHD7-212ENST00000618450 TERF2IPQ9NYB0 399 aa9.92□□□□□ -0.82
CHD7-212ENST00000618450 RTL1A6NKG5 1358 aa9.92□□□□□ -0.82
CHD7-212ENST00000618450 SSFA2P28290 1259 aa9.92□□□□□ -0.82
CHD7-212ENST00000618450 PKP1Q13835 747 aa9.92□□□□□ -0.82
CHD7-212ENST00000618450 HSCBQ8IWL3 235 aa9.91□□□□□ -0.82
CHD7-212ENST00000618450 DIP2BQ9P265 1576 aa9.91□□□□□ -0.82
CHD7-212ENST00000618450 U2SURPO15042 1029 aaKnown RBP9.91□□□□□ -0.82
CHD7-212ENST00000618450 BAG4O95429 457 aaKnown RBP9.91□□□□□ -0.82
CHD7-212ENST00000618450 TTC22Q5TAA0 569 aa9.91□□□□□ -0.82
CHD7-212ENST00000618450 C1orf115Q9H7X2 142 aa9.91□□□□□ -0.82
CHD7-212ENST00000618450 OSBPL3Q9H4L5 887 aa9.9□□□□□ -0.82
CHD7-212ENST00000618450 MINK1Q8N4C8 1332 aaPredicted RBP9.9□□□□□ -0.82
CHD7-212ENST00000618450 METP08581 1390 aa9.9□□□□□ -0.82
CHD7-212ENST00000618450 EMILIN1Q9Y6C2 1016 aa9.9□□□□□ -0.82
CHD7-212ENST00000618450 C16orf71Q8IYS4 520 aaPredicted RBP9.9□□□□□ -0.83
CHD7-212ENST00000618450 USP31Q70CQ4 1352 aa9.89□□□□□ -0.83
CHD7-212ENST00000618450 CHGAP10645 457 aaKnown RBP9.89□□□□□ -0.83
CHD7-212ENST00000618450 ANKRD44Q8N8A2 993 aa9.89□□□□□ -0.83
CHD7-212ENST00000618450 OTUD7AQ8TE49 926 aaPredicted RBP9.89□□□□□ -0.83
CHD7-212ENST00000618450 DIP2AQ14689 1571 aa9.89□□□□□ -0.83
CHD7-212ENST00000618450 CHL1O00533 1208 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms