RNA–Protein interactions for RNA: ENST00000617797.1

CUL1-204, Transcript of cullin 1, humanhuman

TSL 1 (best) BASIC

Gene CUL1, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-204ENST00000617797 TMPOP42166 694 aaKnown RBP8.41□□□□□ -1.06
CUL1-204ENST00000617797 POLKQ9UBT6 870 aa8.41□□□□□ -1.06
CUL1-204ENST00000617797 MAPK8IP3Q9UPT6 1336 aa8.41□□□□□ -1.06
CUL1-204ENST00000617797 RGPD8O14715 1765 aaPredicted RBP8.4□□□□□ -1.06
CUL1-204ENST00000617797 FBLN1P23142 703 aa8.4□□□□□ -1.06
CUL1-204ENST00000617797 NME9Q86XW9 330 aa8.4□□□□□ -1.06
CUL1-204ENST00000617797 DLG5Q8TDM6 1919 aa8.4□□□□□ -1.06
CUL1-204ENST00000617797 CDK12Q9NYV4 1490 aaPredicted RBP8.4□□□□□ -1.07
CUL1-204ENST00000617797 MYH16Q9H6N6 1097 aa8.4□□□□□ -1.07
CUL1-204ENST00000617797 ZRANB1Q9UGI0 708 aa8.4□□□□□ -1.07
CUL1-204ENST00000617797 EID1Q9Y6B2 187 aa8.4□□□□□ -1.07
CUL1-204ENST00000617797 RARSP54136 660 aaKnown RBP8.39□□□□□ -1.07
CUL1-204ENST00000617797 PDE3AQ14432 1141 aa8.39□□□□□ -1.07
CUL1-204ENST00000617797 CENPQQ7L2Z9 268 aaPredicted RBP8.39□□□□□ -1.07
CUL1-204ENST00000617797 RYDENQ9NUL5 291 aaKnown RBP8.39□□□□□ -1.07
CUL1-204ENST00000617797 TRIM35Q9UPQ4 493 aa8.39□□□□□ -1.07
CUL1-204ENST00000617797 DIP2AQ14689 1571 aa8.39□□□□□ -1.07
CUL1-204ENST00000617797 PPM1GO15355 546 aaPredicted RBP8.39□□□□□ -1.07
CUL1-204ENST00000617797 MS4A1P11836 297 aa8.39□□□□□ -1.07
CUL1-204ENST00000617797 CANXP27824 592 aaKnown RBP8.39□□□□□ -1.07
CUL1-204ENST00000617797 SLC26A8Q96RN1 970 aa8.39□□□□□ -1.07
CUL1-204ENST00000617797 ANP32EQ9BTT0 268 aa8.39□□□□□ -1.07
CUL1-204ENST00000617797 PNNQ9H307 717 aaKnown RBP8.39□□□□□ -1.07
CUL1-204ENST00000617797 RIMS1Q86UR5 1692 aaKnown RBP8.39□□□□□ -1.07
CUL1-204ENST00000617797 NALCNQ8IZF0 1738 aa8.39□□□□□ -1.07
CUL1-204ENST00000617797 XRN1Q8IZH2 1706 aaKnown RBP8.39□□□□□ -1.07
CUL1-204ENST00000617797 AATKQ6ZMQ8 1374 aa8.39□□□□□ -1.07
CUL1-204ENST00000617797 EMILIN1Q9Y6C2 1016 aa8.38□□□□□ -1.07
CUL1-204ENST00000617797 STK24Q9Y6E0 443 aa8.38□□□□□ -1.07
CUL1-204ENST00000617797 SKAP1Q86WV1 359 aa8.38□□□□□ -1.07
CUL1-204ENST00000617797 COG3Q96JB2 828 aa8.38□□□□□ -1.07
CUL1-204ENST00000617797 BCL11BQ9C0K0 894 aaPredicted RBP8.38□□□□□ -1.07
CUL1-204ENST00000617797 FCHSD2O94868 740 aa8.37□□□□□ -1.07
CUL1-204ENST00000617797 RIPK4P57078 832 aa8.37□□□□□ -1.07
CUL1-204ENST00000617797 PANK1Q8TE04 598 aa8.37□□□□□ -1.07
CUL1-204ENST00000617797 FRAT1Q92837 279 aaPredicted RBP8.37□□□□□ -1.07
CUL1-204ENST00000617797 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
CUL1-204ENST00000617797 CEP170BQ9Y4F5 1589 aaPredicted RBP8.37□□□□□ -1.07
CUL1-204ENST00000617797 PTCH1Q13635 1447 aa8.37□□□□□ -1.07
CUL1-204ENST00000617797 IL16Q14005 1332 aa8.37□□□□□ -1.07
CUL1-204ENST00000617797 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.37□□□□□ -1.07
CUL1-204ENST00000617797 TSR2Q969E8 191 aaKnown RBP8.37□□□□□ -1.07
CUL1-204ENST00000617797 TBX22Q9Y458 520 aa8.37□□□□□ -1.07
CUL1-204ENST00000617797 PDE4AP27815 886 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 PRKAR2BP31323 418 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 LMOD2Q6P5Q4 547 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 THEMISQ8N1K5 641 aaPredicted RBP8.36□□□□□ -1.07
CUL1-204ENST00000617797 BCL2L13Q9BXK5 485 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 AMOTL2Q9Y2J4 779 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 COG6Q9Y2V7 657 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 VIRMAQ69YN4 1812 aaKnown RBP8.36□□□□□ -1.07
CUL1-204ENST00000617797 FMN2Q9NZ56 1722 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 ACEP12821 1306 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 TTC21BQ7Z4L5 1316 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 NUTM2FA1L443 756 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 CT47B1P0C2W7 299 aaPredicted RBP8.36□□□□□ -1.07
CUL1-204ENST00000617797 EXOSC9Q06265 439 aaKnown RBP8.36□□□□□ -1.07
CUL1-204ENST00000617797 FAM212AQ96EL1 285 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 BACH2Q9BYV9 841 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 TNNQ9UQP3 1299 aa8.36□□□□□ -1.07
CUL1-204ENST00000617797 USP6P35125 1406 aa8.35□□□□□ -1.07
CUL1-204ENST00000617797 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.35□□□□□ -1.07
CUL1-204ENST00000617797 PLEKHG3A1L390 1219 aa8.35□□□□□ -1.07
CUL1-204ENST00000617797 HMOX1P09601 288 aa8.35□□□□□ -1.07
CUL1-204ENST00000617797 IL13P35225 146 aa8.35□□□□□ -1.07
CUL1-204ENST00000617797 ZFP91Q96JP5 570 aaPredicted RBP8.35□□□□□ -1.07
CUL1-204ENST00000617797 SGIP1Q9BQI5 828 aa8.35□□□□□ -1.07
CUL1-204ENST00000617797 OVOS2A0A0J9YW53 1432 aa8.35□□□□□ -1.07
CUL1-204ENST00000617797 OVOS2Q6IE36 1432 aa8.35□□□□□ -1.07
CUL1-204ENST00000617797 PEAK1Q9H792 1746 aa8.35□□□□□ -1.07
CUL1-204ENST00000617797 NEFMP07197 916 aa8.35□□□□□ -1.07
CUL1-204ENST00000617797 RRS1Q15050 365 aaKnown RBP8.35□□□□□ -1.07
CUL1-204ENST00000617797 CLUAP1Q96AJ1 413 aa8.35□□□□□ -1.07
CUL1-204ENST00000617797 ZNF142P52746 1687 aaPredicted RBP8.34□□□□□ -1.07
CUL1-204ENST00000617797 CHRM1P11229 460 aaPredicted RBP8.34□□□□□ -1.07
CUL1-204ENST00000617797 RLBP1P12271 317 aa8.34□□□□□ -1.07
CUL1-204ENST00000617797 ANP32AP39687 249 aaKnown RBP8.34□□□□□ -1.07
CUL1-204ENST00000617797 BRPF1P55201 1214 aaPredicted RBP8.34□□□□□ -1.07
CUL1-204ENST00000617797 CHD2O14647 1828 aaKnown RBP8.34□□□□□ -1.07
CUL1-204ENST00000617797 NFE2L2Q16236 605 aa8.34□□□□□ -1.07
CUL1-204ENST00000617797 KCNV2Q8TDN2 545 aa8.34□□□□□ -1.07
CUL1-204ENST00000617797 PHACTR3Q96KR7 559 aa8.33□□□□□ -1.08
CUL1-204ENST00000617797 SSH2Q76I76 1423 aa8.33□□□□□ -1.08
CUL1-204ENST00000617797 RGPD1P0DJD0 1748 aa8.33□□□□□ -1.08
CUL1-204ENST00000617797 IGHDP01880 384 aa8.33□□□□□ -1.08
CUL1-204ENST00000617797 PIK3C2AO00443 1686 aa8.33□□□□□ -1.08
CUL1-204ENST00000617797 MYT1Q01538 1121 aa8.32□□□□□ -1.08
CUL1-204ENST00000617797 AAMPQ13685 434 aa8.32□□□□□ -1.08
CUL1-204ENST00000617797 ZKSCAN2Q63HK3 967 aa8.32□□□□□ -1.08
CUL1-204ENST00000617797 SMC4Q9NTJ3 1288 aa8.32□□□□□ -1.08
CUL1-204ENST00000617797 ADAMTSL3P82987 1691 aa8.32□□□□□ -1.08
CUL1-204ENST00000617797 MARF1Q9Y4F3 1742 aaKnown RBP8.32□□□□□ -1.08
CUL1-204ENST00000617797 NPM2Q86SE8 214 aaKnown RBP8.32□□□□□ -1.08
CUL1-204ENST00000617797 SSH1Q8WYL5 1049 aa8.32□□□□□ -1.08
CUL1-204ENST00000617797 WDR70Q9NW82 654 aa8.32□□□□□ -1.08
CUL1-204ENST00000617797 PMFBP1Q8TBY8 1022 aa8.31□□□□□ -1.08
CUL1-204ENST00000617797 IPO9Q96P70 1041 aaKnown RBP8.31□□□□□ -1.08
CUL1-204ENST00000617797 USP31Q70CQ4 1352 aa8.31□□□□□ -1.08
CUL1-204ENST00000617797 RGS3P49796 1198 aa8.31□□□□□ -1.08
CUL1-204ENST00000617797 MVPQ14764 893 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms