RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 EIF4A2Q14240 407 aaKnown RBP10.18□□□□□ -0.78
NEK3-207ENST00000617054 CRBNQ96SW2 442 aa10.18□□□□□ -0.78
NEK3-207ENST00000617054 PIK3R4Q99570 1358 aa10.18□□□□□ -0.78
NEK3-207ENST00000617054 AKAP12Q02952 1782 aa10.18□□□□□ -0.78
NEK3-207ENST00000617054 LTV1Q96GA3 475 aaPredicted RBP10.17□□□□□ -0.78
NEK3-207ENST00000617054 FAM83GA6ND36 823 aa10.17□□□□□ -0.78
NEK3-207ENST00000617054 MAP3K19Q56UN5 1328 aa10.17□□□□□ -0.78
NEK3-207ENST00000617054 DCTN1Q14203 1278 aa10.17□□□□□ -0.78
NEK3-207ENST00000617054 SULT6B1Q6IMI4 303 aa10.17□□□□□ -0.78
NEK3-207ENST00000617054 FCHSD2O94868 740 aa10.16□□□□□ -0.78
NEK3-207ENST00000617054 FRAT1Q92837 279 aaPredicted RBP10.16□□□□□ -0.78
NEK3-207ENST00000617054 NALCNQ8IZF0 1738 aa10.16□□□□□ -0.78
NEK3-207ENST00000617054 SSH2Q76I76 1423 aa10.16□□□□□ -0.78
NEK3-207ENST00000617054 IQSEC2Q5JU85 1478 aa10.16□□□□□ -0.78
NEK3-207ENST00000617054 TOPAZ1Q8N9V7 1692 aa10.16□□□□□ -0.78
NEK3-207ENST00000617054 AMPHP49418 695 aa10.15□□□□□ -0.78
NEK3-207ENST00000617054 TNNQ9UQP3 1299 aa10.15□□□□□ -0.78
NEK3-207ENST00000617054 OVOS2A0A0J9YW53 1432 aa10.15□□□□□ -0.79
NEK3-207ENST00000617054 OVOS2Q6IE36 1432 aa10.15□□□□□ -0.79
NEK3-207ENST00000617054 SKAP1Q86WV1 359 aa10.15□□□□□ -0.79
NEK3-207ENST00000617054 AATKQ6ZMQ8 1374 aa10.14□□□□□ -0.79
NEK3-207ENST00000617054 PELP1Q8IZL8 1130 aaKnown RBP10.14□□□□□ -0.79
NEK3-207ENST00000617054 WDR63Q8IWG1 891 aa10.14□□□□□ -0.79
NEK3-207ENST00000617054 PODXL2Q9NZ53 605 aa10.14□□□□□ -0.79
NEK3-207ENST00000617054 ELL2O00472 640 aaPredicted RBP10.13□□□□□ -0.79
NEK3-207ENST00000617054 EXOSC9Q06265 439 aaKnown RBP10.13□□□□□ -0.79
NEK3-207ENST00000617054 ERICH6BQ5W0A0 696 aa10.13□□□□□ -0.79
NEK3-207ENST00000617054 MYCNP04198 464 aaPredicted RBP10.13□□□□□ -0.79
NEK3-207ENST00000617054 NEFMP07197 916 aa10.13□□□□□ -0.79
NEK3-207ENST00000617054 TTC21AQ8NDW8 1320 aa10.13□□□□□ -0.79
NEK3-207ENST00000617054 LRRC7Q96NW7 1537 aa10.13□□□□□ -0.79
NEK3-207ENST00000617054 CCDC27Q2M243 656 aa10.13□□□□□ -0.79
NEK3-207ENST00000617054 NRKQ7Z2Y5 1582 aa10.13□□□□□ -0.79
NEK3-207ENST00000617054 USHBP1Q8N6Y0 703 aa10.13□□□□□ -0.79
NEK3-207ENST00000617054 CLUAP1Q96AJ1 413 aa10.13□□□□□ -0.79
NEK3-207ENST00000617054 ADGRL3Q9HAR2 1447 aa10.12□□□□□ -0.79
NEK3-207ENST00000617054 TMEM94Q12767 1356 aa10.12□□□□□ -0.79
NEK3-207ENST00000617054 FANCIQ9NVI1 1328 aa10.12□□□□□ -0.79
NEK3-207ENST00000617054 PANK1Q8TE04 598 aa10.12□□□□□ -0.79
NEK3-207ENST00000617054 RNF216Q9NWF9 866 aaPredicted RBP10.12□□□□□ -0.79
NEK3-207ENST00000617054 TCERG1O14776 1098 aaKnown RBP10.12□□□□□ -0.79
NEK3-207ENST00000617054 C19orf44Q9H6X5 657 aa10.12□□□□□ -0.79
NEK3-207ENST00000617054 FMN2Q9NZ56 1722 aa10.11□□□□□ -0.79
NEK3-207ENST00000617054 CANXP27824 592 aaKnown RBP10.11□□□□□ -0.79
NEK3-207ENST00000617054 VASPP50552 380 aaPredicted RBP10.11□□□□□ -0.79
NEK3-207ENST00000617054 RARSP54136 660 aaKnown RBP10.11□□□□□ -0.79
NEK3-207ENST00000617054 NFE2L2Q16236 605 aa10.11□□□□□ -0.79
NEK3-207ENST00000617054 NGEFQ8N5V2 710 aa10.11□□□□□ -0.79
NEK3-207ENST00000617054 CDK12Q9NYV4 1490 aaPredicted RBP10.11□□□□□ -0.79
NEK3-207ENST00000617054 PEAK1Q9H792 1746 aa10.11□□□□□ -0.79
NEK3-207ENST00000617054 ANKARQ7Z5J8 1434 aa10.11□□□□□ -0.79
NEK3-207ENST00000617054 MCM10Q7L590 875 aa10.11□□□□□ -0.79
NEK3-207ENST00000617054 EYA1Q99502 592 aa10.11□□□□□ -0.79
NEK3-207ENST00000617054 PIK3C2AO00443 1686 aa10.11□□□□□ -0.79
NEK3-207ENST00000617054 USP31Q70CQ4 1352 aa10.1□□□□□ -0.79
NEK3-207ENST00000617054 ATF3P18847 181 aa10.1□□□□□ -0.79
NEK3-207ENST00000617054 PNNQ9H307 717 aaKnown RBP10.1□□□□□ -0.79
NEK3-207ENST00000617054 MYH16Q9H6N6 1097 aa10.1□□□□□ -0.79
NEK3-207ENST00000617054 ZNF335Q9H4Z2 1342 aaPredicted RBP10.1□□□□□ -0.79
NEK3-207ENST00000617054 HOXC9P31274 260 aa10.09□□□□□ -0.79
NEK3-207ENST00000617054 KRT28Q7Z3Y7 464 aa10.09□□□□□ -0.79
NEK3-207ENST00000617054 KLHL34Q8N239 644 aa10.09□□□□□ -0.79
NEK3-207ENST00000617054 MIS18AQ9NYP9 233 aa10.09□□□□□ -0.79
NEK3-207ENST00000617054 COG6Q9Y2V7 657 aa10.09□□□□□ -0.79
NEK3-207ENST00000617054 CABLES1Q8TDN4 633 aa10.09□□□□□ -0.79
NEK3-207ENST00000617054 ARXQ96QS3 562 aa10.09□□□□□ -0.79
NEK3-207ENST00000617054 RLBP1P12271 317 aa10.08□□□□□ -0.8
NEK3-207ENST00000617054 TSPYL6Q8N831 410 aa10.08□□□□□ -0.8
NEK3-207ENST00000617054 STRCP1A6NGW2 1772 aa10.08□□□□□ -0.8
NEK3-207ENST00000617054 ZC3H6P61129 1189 aaKnown RBP10.08□□□□□ -0.8
NEK3-207ENST00000617054 KRT24Q2M2I5 525 aa10.08□□□□□ -0.8
NEK3-207ENST00000617054 LRRC59Q96AG4 307 aaKnown RBP10.08□□□□□ -0.8
NEK3-207ENST00000617054 FLT4P35916 1363 aa10.07□□□□□ -0.8
NEK3-207ENST00000617054 MTHFSDQ2M296 383 aaKnown RBP10.07□□□□□ -0.8
NEK3-207ENST00000617054 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.07□□□□□ -0.8
NEK3-207ENST00000617054 SBNO1A3KN83 1393 aa10.07□□□□□ -0.8
NEK3-207ENST00000617054 GCP02774 474 aa10.07□□□□□ -0.8
NEK3-207ENST00000617054 SSH1Q8WYL5 1049 aa10.07□□□□□ -0.8
NEK3-207ENST00000617054 MBIPQ9NS73 344 aa10.06□□□□□ -0.8
NEK3-207ENST00000617054 SMC4Q9NTJ3 1288 aa10.06□□□□□ -0.8
NEK3-207ENST00000617054 C1orf167Q5SNV9 1468 aa10.06□□□□□ -0.8
NEK3-207ENST00000617054 LMTK3Q96Q04 1460 aa10.06□□□□□ -0.8
NEK3-207ENST00000617054 AXIN2Q9Y2T1 843 aa10.06□□□□□ -0.8
NEK3-207ENST00000617054 RGL2O15211 777 aa10.05□□□□□ -0.8
NEK3-207ENST00000617054 TMEM132AQ24JP5 1023 aa10.05□□□□□ -0.8
NEK3-207ENST00000617054 NBPF6Q5VWK0 638 aa10.05□□□□□ -0.8
NEK3-207ENST00000617054 NBPF4Q96M43 638 aa10.05□□□□□ -0.8
NEK3-207ENST00000617054 C8orf58Q8NAV2 365 aa10.05□□□□□ -0.8
NEK3-207ENST00000617054 NOB1Q9ULX3 412 aaKnown RBP10.04□□□□□ -0.8
NEK3-207ENST00000617054 MARF1Q9Y4F3 1742 aaKnown RBP10.04□□□□□ -0.8
NEK3-207ENST00000617054 RBM19Q9Y4C8 960 aaKnown RBP10.04□□□□□ -0.8
NEK3-207ENST00000617054 DLG5Q8TDM6 1919 aa10.03□□□□□ -0.8
NEK3-207ENST00000617054 NWD1Q149M9 1564 aa10.03□□□□□ -0.8
NEK3-207ENST00000617054 IGSF1Q8N6C5 1336 aa10.02□□□□□ -0.8
NEK3-207ENST00000617054 CHRNA2Q15822 529 aa10.02□□□□□ -0.8
NEK3-207ENST00000617054 CADPS2Q86UW7 1296 aa10.02□□□□□ -0.8
NEK3-207ENST00000617054 IP6K1Q92551 441 aa10.02□□□□□ -0.8
NEK3-207ENST00000617054 MST1RQ04912 1400 aa10.02□□□□□ -0.81
NEK3-207ENST00000617054 IL16Q14005 1332 aa10.02□□□□□ -0.81
NEK3-207ENST00000617054 VAMP4O75379 141 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms