RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 BAG4O95429 457 aaKnown RBP19.32■□□□□ 0.68
GPN1-212ENST00000616939 CHGAP10645 457 aaKnown RBP19.32■□□□□ 0.68
GPN1-212ENST00000616939 SSFA2P28290 1259 aa19.32■□□□□ 0.68
GPN1-212ENST00000616939 PTPRMP28827 1452 aa19.32■□□□□ 0.68
GPN1-212ENST00000616939 VGFO15240 615 aaPredicted RBP19.32■□□□□ 0.68
GPN1-212ENST00000616939 DIAPH1O60610 1272 aaKnown RBP19.32■□□□□ 0.68
GPN1-212ENST00000616939 FCHSD2O94868 740 aa19.32■□□□□ 0.68
GPN1-212ENST00000616939 NUCB2P80303 420 aa19.32■□□□□ 0.68
GPN1-212ENST00000616939 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.32■□□□□ 0.68
GPN1-212ENST00000616939 GAS2L2Q8NHY3 880 aa19.32■□□□□ 0.68
GPN1-212ENST00000616939 CALD1Q05682 793 aaKnown RBP19.31■□□□□ 0.68
GPN1-212ENST00000616939 MRPL50Q8N5N7 158 aaKnown RBP19.31■□□□□ 0.68
GPN1-212ENST00000616939 PDCL3Q9H2J4 239 aa19.31■□□□□ 0.68
GPN1-212ENST00000616939 CYP2E1P05181 493 aaPredicted RBP19.3■□□□□ 0.68
GPN1-212ENST00000616939 ANKRD45Q5TZF3 282 aa19.3■□□□□ 0.68
GPN1-212ENST00000616939 POGZQ7Z3K3 1410 aa19.3■□□□□ 0.68
GPN1-212ENST00000616939 KNDC1Q76NI1 1749 aa19.3■□□□□ 0.68
GPN1-212ENST00000616939 TERF2IPQ9NYB0 399 aa19.3■□□□□ 0.68
GPN1-212ENST00000616939 AK9Q5TCS8 1911 aa19.29■□□□□ 0.68
GPN1-212ENST00000616939 CABP2Q9NPB3 220 aa19.29■□□□□ 0.68
GPN1-212ENST00000616939 DDX49Q9Y6V7 483 aaKnown RBP19.28■□□□□ 0.68
GPN1-212ENST00000616939 FYB1O15117 783 aa19.28■□□□□ 0.68
GPN1-212ENST00000616939 VSIG10Q8N0Z9 540 aa19.28■□□□□ 0.68
GPN1-212ENST00000616939 DLG5Q8TDM6 1919 aa19.27■□□□□ 0.68
GPN1-212ENST00000616939 KIAA1211Q6ZU35 1233 aa19.27■□□□□ 0.68
GPN1-212ENST00000616939 GGNBP2Q9H3C7 697 aa19.27■□□□□ 0.68
GPN1-212ENST00000616939 VAMP4O75379 141 aa19.26■□□□□ 0.67
GPN1-212ENST00000616939 PDLIM2Q96JY6 352 aa19.26■□□□□ 0.67
GPN1-212ENST00000616939 CWC22Q9HCG8 908 aaKnown RBP19.26■□□□□ 0.67
GPN1-212ENST00000616939 MYO5BQ9ULV0 1848 aa19.25■□□□□ 0.67
GPN1-212ENST00000616939 IFT57Q9NWB7 429 aa19.25■□□□□ 0.67
GPN1-212ENST00000616939 MSNP26038 577 aaKnown RBP19.25■□□□□ 0.67
GPN1-212ENST00000616939 ZMYND15Q9H091 742 aa19.25■□□□□ 0.67
GPN1-212ENST00000616939 ZNF500O60304 480 aaPredicted RBP19.24■□□□□ 0.67
GPN1-212ENST00000616939 MAP2P11137 1827 aaKnown RBP19.24■□□□□ 0.67
GPN1-212ENST00000616939 NFE2L2Q16236 605 aa19.24■□□□□ 0.67
GPN1-212ENST00000616939 SIRT2Q8IXJ6 389 aa19.24■□□□□ 0.67
GPN1-212ENST00000616939 MAP7D2Q96T17 732 aa19.24■□□□□ 0.67
GPN1-212ENST00000616939 API5Q9BZZ5 524 aaKnown RBP19.24■□□□□ 0.67
GPN1-212ENST00000616939 ZNF853P0CG23 659 aa19.23■□□□□ 0.67
GPN1-212ENST00000616939 GNAI1P63096 354 aa19.23■□□□□ 0.67
GPN1-212ENST00000616939 RBM42Q9BTD8 480 aaKnown RBP19.23■□□□□ 0.67
GPN1-212ENST00000616939 LMBRD1Q9NUN5 540 aa19.23■□□□□ 0.67
GPN1-212ENST00000616939 ATP7BP35670 1465 aa19.23■□□□□ 0.67
GPN1-212ENST00000616939 MCM5P33992 734 aa19.23■□□□□ 0.67
GPN1-212ENST00000616939 NOL7Q9UMY1 257 aaKnown RBP19.22■□□□□ 0.67
GPN1-212ENST00000616939 TMEM131LA2VDJ0 1609 aa19.22■□□□□ 0.67
GPN1-212ENST00000616939 GSPT1P15170 499 aaKnown RBP19.21■□□□□ 0.67
GPN1-212ENST00000616939 TTC22Q5TAA0 569 aa19.21■□□□□ 0.67
GPN1-212ENST00000616939 HDGFL2Q7Z4V5 671 aaPredicted RBP19.21■□□□□ 0.67
GPN1-212ENST00000616939 PLEKHM2Q8IWE5 1019 aa19.21■□□□□ 0.67
GPN1-212ENST00000616939 FOXD4L1Q9NU39 408 aa19.21■□□□□ 0.67
GPN1-212ENST00000616939 ARHGEF40Q8TER5 1519 aa19.21■□□□□ 0.67
GPN1-212ENST00000616939 CPSF1Q10570 1443 aaKnown RBP19.21■□□□□ 0.67
GPN1-212ENST00000616939 ZSCAN23Q3MJ62 389 aa19.21■□□□□ 0.67
GPN1-212ENST00000616939 DCTPP1Q9H773 170 aa19.21■□□□□ 0.67
GPN1-212ENST00000616939 CDK12Q9NYV4 1490 aaPredicted RBP19.2■□□□□ 0.66
GPN1-212ENST00000616939 SRPK2P78362 688 aaKnown RBP19.2■□□□□ 0.66
GPN1-212ENST00000616939 USP26Q9BXU7 913 aa19.2■□□□□ 0.66
GPN1-212ENST00000616939 YTHDC2Q9H6S0 1430 aaKnown RBP19.2■□□□□ 0.66
GPN1-212ENST00000616939 INTS3Q68E01 1043 aaKnown RBP19.19■□□□□ 0.66
GPN1-212ENST00000616939 DLC1Q96QB1 1528 aa19.19■□□□□ 0.66
GPN1-212ENST00000616939 PREX1Q8TCU6 1659 aa19.19■□□□□ 0.66
GPN1-212ENST00000616939 PRKAR2BP31323 418 aa19.18■□□□□ 0.66
GPN1-212ENST00000616939 MCTP1Q6DN14 999 aa19.18■□□□□ 0.66
GPN1-212ENST00000616939 TUBGCP6Q96RT7 1819 aa19.17■□□□□ 0.66
GPN1-212ENST00000616939 ATP10DQ9P241 1426 aa19.17■□□□□ 0.66
GPN1-212ENST00000616939 LMOD3Q0VAK6 560 aa19.17■□□□□ 0.66
GPN1-212ENST00000616939 C1orf115Q9H7X2 142 aa19.17■□□□□ 0.66
GPN1-212ENST00000616939 CSPP1Q1MSJ5 1256 aa19.16■□□□□ 0.66
GPN1-212ENST00000616939 DIP2CQ9Y2E4 1556 aa19.16■□□□□ 0.66
GPN1-212ENST00000616939 CAVIN1Q6NZI2 390 aaKnown RBP19.16■□□□□ 0.66
GPN1-212ENST00000616939 ST18O60284 1047 aa19.15■□□□□ 0.66
GPN1-212ENST00000616939 RBSNQ9H1K0 784 aa19.15■□□□□ 0.66
GPN1-212ENST00000616939 ANKRD44Q8N8A2 993 aa19.14■□□□□ 0.65
GPN1-212ENST00000616939 ZKSCAN5Q9Y2L8 839 aa19.14■□□□□ 0.65
GPN1-212ENST00000616939 ALKQ9UM73 1620 aa19.14■□□□□ 0.65
GPN1-212ENST00000616939 CASC1Q6TDU7 716 aa19.14■□□□□ 0.65
GPN1-212ENST00000616939 LRSAM1Q6UWE0 723 aa19.14■□□□□ 0.65
GPN1-212ENST00000616939 MTERF4Q7Z6M4 381 aaKnown RBP19.14■□□□□ 0.65
GPN1-212ENST00000616939 MBIPQ9NS73 344 aa19.14■□□□□ 0.65
GPN1-212ENST00000616939 NRKQ7Z2Y5 1582 aa19.13■□□□□ 0.65
GPN1-212ENST00000616939 TWISTNBQ3B726 338 aaPredicted RBP19.13■□□□□ 0.65
GPN1-212ENST00000616939 RPAP2Q8IXW5 612 aaPredicted RBP19.13■□□□□ 0.65
GPN1-212ENST00000616939 TSPYL6Q8N831 410 aa19.13■□□□□ 0.65
GPN1-212ENST00000616939 SLC52A1Q9NWF4 448 aa19.13■□□□□ 0.65
GPN1-212ENST00000616939 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.13■□□□□ 0.65
GPN1-212ENST00000616939 POLKQ9UBT6 870 aa19.13■□□□□ 0.65
GPN1-212ENST00000616939 RIMS2Q9UQ26 1411 aa19.13■□□□□ 0.65
GPN1-212ENST00000616939 MBD3O95983 291 aa19.12■□□□□ 0.65
GPN1-212ENST00000616939 GGT6Q6P531 493 aa19.12■□□□□ 0.65
GPN1-212ENST00000616939 AATKQ6ZMQ8 1374 aa19.12■□□□□ 0.65
GPN1-212ENST00000616939 CCDC39Q9UFE4 941 aa19.11■□□□□ 0.65
GPN1-212ENST00000616939 RGS12O14924 1447 aa19.11■□□□□ 0.65
GPN1-212ENST00000616939 REC8O95072 547 aa19.11■□□□□ 0.65
GPN1-212ENST00000616939 HAP1P54257 671 aaPredicted RBP19.11■□□□□ 0.65
GPN1-212ENST00000616939 MON2Q7Z3U7 1717 aa19.11■□□□□ 0.65
GPN1-212ENST00000616939 GPT2Q8TD30 523 aa19.1■□□□□ 0.65
GPN1-212ENST00000616939 PRIM1P49642 420 aaKnown RBP19.09■□□□□ 0.65
GPN1-212ENST00000616939 PHACTR3Q96KR7 559 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms