RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 IL13P35225 146 aa17.59■□□□□ 0.41
CACNA1C-231ENST00000616390 SLC26A8Q96RN1 970 aa17.59■□□□□ 0.41
CACNA1C-231ENST00000616390 CHMP4AQ9BY43 222 aa17.59■□□□□ 0.41
CACNA1C-231ENST00000616390 SPRYD3Q8NCJ5 442 aa17.58■□□□□ 0.41
CACNA1C-231ENST00000616390 USP35Q9P2H5 1018 aa17.58■□□□□ 0.41
CACNA1C-231ENST00000616390 AGLP35573 1532 aa17.58■□□□□ 0.4
CACNA1C-231ENST00000616390 VIRMAQ69YN4 1812 aaKnown RBP17.57■□□□□ 0.4
CACNA1C-231ENST00000616390 ATP7BP35670 1465 aa17.57■□□□□ 0.4
CACNA1C-231ENST00000616390 FRAT2O75474 233 aaPredicted RBP17.57■□□□□ 0.4
CACNA1C-231ENST00000616390 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
CACNA1C-231ENST00000616390 RBM10P98175 930 aaKnown RBP17.57■□□□□ 0.4
CACNA1C-231ENST00000616390 KIF16BQ96L93 1317 aa17.57■□□□□ 0.4
CACNA1C-231ENST00000616390 PRR36Q9H6K5 1346 aa17.56■□□□□ 0.4
CACNA1C-231ENST00000616390 FAM135BQ49AJ0 1406 aa17.56■□□□□ 0.4
CACNA1C-231ENST00000616390 MFAP1P55081 439 aaKnown RBP17.56■□□□□ 0.4
CACNA1C-231ENST00000616390 MBIPQ9NS73 344 aa17.56■□□□□ 0.4
CACNA1C-231ENST00000616390 SETD1AO15047 1707 aaKnown RBP17.56■□□□□ 0.4
CACNA1C-231ENST00000616390 EDC4Q6P2E9 1401 aaKnown RBP17.56■□□□□ 0.4
CACNA1C-231ENST00000616390 AEBP1Q8IUX7 1158 aa17.55■□□□□ 0.4
CACNA1C-231ENST00000616390 LNPKQ9C0E8 428 aa17.55■□□□□ 0.4
CACNA1C-231ENST00000616390 CPS1P31327 1500 aa17.55■□□□□ 0.4
CACNA1C-231ENST00000616390 DHX37Q8IY37 1157 aaKnown RBP17.55■□□□□ 0.4
CACNA1C-231ENST00000616390 ZBTB40Q9NUA8 1239 aa17.55■□□□□ 0.4
CACNA1C-231ENST00000616390 DLC1Q96QB1 1528 aa17.55■□□□□ 0.4
CACNA1C-231ENST00000616390 VAMP4O75379 141 aa17.54■□□□□ 0.4
CACNA1C-231ENST00000616390 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
CACNA1C-231ENST00000616390 CPSF1Q10570 1443 aaKnown RBP17.54■□□□□ 0.4
CACNA1C-231ENST00000616390 TNRQ92752 1358 aa17.54■□□□□ 0.4
CACNA1C-231ENST00000616390 LTKP29376 864 aa17.53■□□□□ 0.4
CACNA1C-231ENST00000616390 GNAI1P63096 354 aa17.53■□□□□ 0.4
CACNA1C-231ENST00000616390 SULT6B1Q6IMI4 303 aa17.53■□□□□ 0.4
CACNA1C-231ENST00000616390 ROBO2Q9HCK4 1378 aa17.53■□□□□ 0.4
CACNA1C-231ENST00000616390 BECN1Q14457 450 aa17.53■□□□□ 0.4
CACNA1C-231ENST00000616390 TWISTNBQ3B726 338 aaPredicted RBP17.53■□□□□ 0.4
CACNA1C-231ENST00000616390 ALDH1L2Q3SY69 923 aa17.53■□□□□ 0.4
CACNA1C-231ENST00000616390 C8orf58Q8NAV2 365 aa17.53■□□□□ 0.4
CACNA1C-231ENST00000616390 HDAC1Q13547 482 aaPredicted RBP17.52■□□□□ 0.4
CACNA1C-231ENST00000616390 REREQ9P2R6 1566 aa17.52■□□□□ 0.4
CACNA1C-231ENST00000616390 ACEP12821 1306 aa17.51■□□□□ 0.39
CACNA1C-231ENST00000616390 KRT24Q2M2I5 525 aa17.51■□□□□ 0.39
CACNA1C-231ENST00000616390 GLIPR1L2Q4G1C9 344 aa17.51■□□□□ 0.39
CACNA1C-231ENST00000616390 MRPL50Q8N5N7 158 aaKnown RBP17.51■□□□□ 0.39
CACNA1C-231ENST00000616390 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
CACNA1C-231ENST00000616390 HSP90AB2PQ58FF8 381 aa17.49■□□□□ 0.39
CACNA1C-231ENST00000616390 ANKRD45Q5TZF3 282 aa17.49■□□□□ 0.39
CACNA1C-231ENST00000616390 MCM10Q7L590 875 aa17.49■□□□□ 0.39
CACNA1C-231ENST00000616390 TBC1D32Q96NH3 1257 aa17.49■□□□□ 0.39
CACNA1C-231ENST00000616390 ZNF692Q9BU19 519 aaPredicted RBP17.49■□□□□ 0.39
CACNA1C-231ENST00000616390 IFT57Q9NWB7 429 aa17.49■□□□□ 0.39
CACNA1C-231ENST00000616390 TMEM2Q9UHN6 1383 aa17.49■□□□□ 0.39
CACNA1C-231ENST00000616390 DLG5Q8TDM6 1919 aa17.49■□□□□ 0.39
CACNA1C-231ENST00000616390 EIF4A2Q14240 407 aaKnown RBP17.48■□□□□ 0.39
CACNA1C-231ENST00000616390 KIF13AQ9H1H9 1805 aa17.48■□□□□ 0.39
CACNA1C-231ENST00000616390 SMC5Q8IY18 1101 aa17.48■□□□□ 0.39
CACNA1C-231ENST00000616390 TTC21BQ7Z4L5 1316 aa17.48■□□□□ 0.39
CACNA1C-231ENST00000616390 BRD2P25440 801 aaKnown RBP17.47■□□□□ 0.39
CACNA1C-231ENST00000616390 CFAP44Q96MT7 982 aa17.47■□□□□ 0.39
CACNA1C-231ENST00000616390 ZBTB7BO15156 539 aaPredicted RBP17.47■□□□□ 0.39
CACNA1C-231ENST00000616390 GSE1Q14687 1217 aa17.47■□□□□ 0.39
CACNA1C-231ENST00000616390 TBC1D2Q9BYX2 928 aa17.47■□□□□ 0.39
CACNA1C-231ENST00000616390 C22orf23Q9BZE7 217 aa17.47■□□□□ 0.39
CACNA1C-231ENST00000616390 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
CACNA1C-231ENST00000616390 CDC42BPGQ6DT37 1551 aa17.46■□□□□ 0.39
CACNA1C-231ENST00000616390 LMOD3Q0VAK6 560 aa17.45■□□□□ 0.38
CACNA1C-231ENST00000616390 CDK12Q9NYV4 1490 aaPredicted RBP17.45■□□□□ 0.38
CACNA1C-231ENST00000616390 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
CACNA1C-231ENST00000616390 NUTM2GQ5VZR2 741 aa17.45■□□□□ 0.38
CACNA1C-231ENST00000616390 CHD1LQ86WJ1 897 aa17.45■□□□□ 0.38
CACNA1C-231ENST00000616390 ITSN1Q15811 1721 aa17.44■□□□□ 0.38
CACNA1C-231ENST00000616390 AATKQ6ZMQ8 1374 aa17.44■□□□□ 0.38
CACNA1C-231ENST00000616390 NUCB1Q02818 461 aa17.44■□□□□ 0.38
CACNA1C-231ENST00000616390 AMOTL2Q9Y2J4 779 aa17.44■□□□□ 0.38
CACNA1C-231ENST00000616390 EID1Q9Y6B2 187 aa17.43■□□□□ 0.38
CACNA1C-231ENST00000616390 NGDNQ8NEJ9 315 aaKnown RBP17.43■□□□□ 0.38
CACNA1C-231ENST00000616390 FOXO3O43524 673 aa17.42■□□□□ 0.38
CACNA1C-231ENST00000616390 IL27Q8NEV9 243 aa17.42■□□□□ 0.38
CACNA1C-231ENST00000616390 SAMD1Q6SPF0 538 aaPredicted RBP17.42■□□□□ 0.38
CACNA1C-231ENST00000616390 ADAMTS13Q76LX8 1427 aa17.42■□□□□ 0.38
CACNA1C-231ENST00000616390 MON2Q7Z3U7 1717 aa17.42■□□□□ 0.38
CACNA1C-231ENST00000616390 ZNF428Q96B54 188 aa17.42■□□□□ 0.38
CACNA1C-231ENST00000616390 UBR1Q8IWV7 1749 aa17.41■□□□□ 0.38
CACNA1C-231ENST00000616390 APBB1O00213 710 aa17.41■□□□□ 0.38
CACNA1C-231ENST00000616390 SIRT1Q96EB6 747 aa17.41■□□□□ 0.38
CACNA1C-231ENST00000616390 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.41■□□□□ 0.38
CACNA1C-231ENST00000616390 HAP1P54257 671 aaPredicted RBP17.41■□□□□ 0.38
CACNA1C-231ENST00000616390 SIRT2Q8IXJ6 389 aa17.4■□□□□ 0.38
CACNA1C-231ENST00000616390 AKAP12Q02952 1782 aa17.4■□□□□ 0.38
CACNA1C-231ENST00000616390 C3P01024 1663 aa17.39■□□□□ 0.37
CACNA1C-231ENST00000616390 C14orf37Q86TY3 774 aa17.39■□□□□ 0.37
CACNA1C-231ENST00000616390 ARHGAP45Q92619 1136 aa17.39■□□□□ 0.37
CACNA1C-231ENST00000616390 TECPR2O15040 1411 aa17.38■□□□□ 0.37
CACNA1C-231ENST00000616390 BRPF1P55201 1214 aaPredicted RBP17.38■□□□□ 0.37
CACNA1C-231ENST00000616390 RBM33Q96EV2 1170 aaKnown RBP17.38■□□□□ 0.37
CACNA1C-231ENST00000616390 PTPRUQ92729 1446 aa17.37■□□□□ 0.37
CACNA1C-231ENST00000616390 AMPHP49418 695 aa17.37■□□□□ 0.37
CACNA1C-231ENST00000616390 PAXIP1Q6ZW49 1069 aaPredicted RBP17.37■□□□□ 0.37
CACNA1C-231ENST00000616390 API5Q9BZZ5 524 aaKnown RBP17.37■□□□□ 0.37
CACNA1C-231ENST00000616390 ABCC4O15439 1325 aa17.37■□□□□ 0.37
CACNA1C-231ENST00000616390 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
CACNA1C-231ENST00000616390 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms