RNA–Protein interactions for RNA: ENST00000616380.4

EPHB6-209, Transcript of EPH receptor B6, humanhuman

TSL 2

Gene EPHB6, Length 4,409 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB6-209ENST00000616380 TRIM29Q14134 588 aa15.2■□□□□ 0.02
EPHB6-209ENST00000616380 DDX54Q8TDD1 881 aaKnown RBP15.2■□□□□ 0.02
EPHB6-209ENST00000616380 HIP1O00291 1037 aa15.19■□□□□ 0.02
EPHB6-209ENST00000616380 TRAPPC8Q9Y2L5 1435 aa15.19■□□□□ 0.02
EPHB6-209ENST00000616380 PDCP20941 246 aa15.19■□□□□ 0.02
EPHB6-209ENST00000616380 NASPP49321 788 aaPredicted RBP15.19■□□□□ 0.02
EPHB6-209ENST00000616380 AMOTL1Q8IY63 956 aa15.18■□□□□ 0.02
EPHB6-209ENST00000616380 SURF6O75683 361 aaKnown RBP15.18■□□□□ 0.02
EPHB6-209ENST00000616380 TPM1P09493 284 aa15.18■□□□□ 0.02
EPHB6-209ENST00000616380 RRS1Q15050 365 aaKnown RBP15.18■□□□□ 0.02
EPHB6-209ENST00000616380 HDGFL1Q5TGJ6 251 aa15.18■□□□□ 0.02
EPHB6-209ENST00000616380 LETM1O95202 739 aaPredicted RBP15.18■□□□□ 0.02
EPHB6-209ENST00000616380 RBM10P98175 930 aaKnown RBP15.18■□□□□ 0.02
EPHB6-209ENST00000616380 KIF6Q6ZMV9 814 aa15.18■□□□□ 0.02
EPHB6-209ENST00000616380 HOOK1Q9UJC3 728 aaKnown RBP15.18■□□□□ 0.02
EPHB6-209ENST00000616380 SCAF11Q99590 1463 aaKnown RBP15.18■□□□□ 0.02
EPHB6-209ENST00000616380 NEK4P51957 841 aa15.17■□□□□ 0.02
EPHB6-209ENST00000616380 ERC1Q8IUD2 1116 aa15.17■□□□□ 0.02
EPHB6-209ENST00000616380 GOLGA6L1Q8N7Z2 621 aa15.17■□□□□ 0.02
EPHB6-209ENST00000616380 RBM33Q96EV2 1170 aaKnown RBP15.17■□□□□ 0.02
EPHB6-209ENST00000616380 CCDC73Q6ZRK6 1079 aa15.17■□□□□ 0.02
EPHB6-209ENST00000616380 TMPOP42166 694 aaKnown RBP15.16■□□□□ 0.02
EPHB6-209ENST00000616380 TSR1Q2NL82 804 aaKnown RBP15.16■□□□□ 0.02
EPHB6-209ENST00000616380 SASS6Q6UVJ0 657 aa15.16■□□□□ 0.02
EPHB6-209ENST00000616380 CHD1LQ86WJ1 897 aa15.16■□□□□ 0.02
EPHB6-209ENST00000616380 RPAP2Q8IXW5 612 aaPredicted RBP15.16■□□□□ 0.02
EPHB6-209ENST00000616380 SRCIN1Q9C0H9 1055 aa15.16■□□□□ 0.02
EPHB6-209ENST00000616380 RRP9O43818 475 aaKnown RBP15.15■□□□□ 0.02
EPHB6-209ENST00000616380 NFE2L2Q16236 605 aa15.15■□□□□ 0.02
EPHB6-209ENST00000616380 TPD52L1Q16890 204 aaPredicted RBP15.15■□□□□ 0.02
EPHB6-209ENST00000616380 DISP1Q96F81 1524 aa15.15■□□□□ 0.02
EPHB6-209ENST00000616380 CCDC39Q9UFE4 941 aa15.15■□□□□ 0.02
EPHB6-209ENST00000616380 NKTRP30414 1462 aaKnown RBP15.15■□□□□ 0.02
EPHB6-209ENST00000616380 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
EPHB6-209ENST00000616380 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
EPHB6-209ENST00000616380 K7ELQ4 463 aaPredicted RBP15.14■□□□□ 0.01
EPHB6-209ENST00000616380 ALDH1L2Q3SY69 923 aa15.13■□□□□ 0.01
EPHB6-209ENST00000616380 RALYLQ86SE5 291 aaKnown RBP15.13■□□□□ 0.01
EPHB6-209ENST00000616380 PBRM1Q86U86 1689 aa15.12■□□□□ 0.01
EPHB6-209ENST00000616380 RARSP54136 660 aaKnown RBP15.12■□□□□ 0.01
EPHB6-209ENST00000616380 MAPKBP1O60336 1514 aa15.12■□□□□ 0.01
EPHB6-209ENST00000616380 KRT28Q7Z3Y7 464 aa15.12■□□□□ 0.01
EPHB6-209ENST00000616380 ANKRD20A12PQ8NF67 263 aa15.12■□□□□ 0.01
EPHB6-209ENST00000616380 MSH6P52701 1360 aa15.12■□□□□ 0.01
EPHB6-209ENST00000616380 CEP170Q5SW79 1584 aa15.12■□□□□ 0.01
EPHB6-209ENST00000616380 APPP05067 770 aa15.12■□□□□ 0.01
EPHB6-209ENST00000616380 AMOTQ4VCS5 1084 aa15.12■□□□□ 0.01
EPHB6-209ENST00000616380 LRRCC1Q9C099 1032 aa15.12■□□□□ 0.01
EPHB6-209ENST00000616380 MTERF4Q7Z6M4 381 aaKnown RBP15.12■□□□□ 0.01
EPHB6-209ENST00000616380 NME9Q86XW9 330 aa15.11■□□□□ 0.01
EPHB6-209ENST00000616380 FSD1Q9BTV5 496 aa15.11■□□□□ 0.01
EPHB6-209ENST00000616380 SHANK2Q9UPX8 1470 aa15.11■□□□□ 0.01
EPHB6-209ENST00000616380 PDIA4P13667 645 aaKnown RBP15.11■□□□□ 0.01
EPHB6-209ENST00000616380 CCDC173Q0VFZ6 552 aa15.11■□□□□ 0.01
EPHB6-209ENST00000616380 SAFBQ15424 915 aaKnown RBP eCLIP15.11■□□□□ 0.01
EPHB6-209ENST00000616380 ZNF771Q7L3S4 317 aaPredicted RBP15.11■□□□□ 0.01
EPHB6-209ENST00000616380 MAP7D2Q96T17 732 aa15.11■□□□□ 0.01
EPHB6-209ENST00000616380 NSD2O96028 1365 aa15.11■□□□□ 0.01
EPHB6-209ENST00000616380 TPM2P07951 284 aa15.11■□□□□ 0.01
EPHB6-209ENST00000616380 TRIM34Q9BYJ4 488 aa15.11■□□□□ 0.01
EPHB6-209ENST00000616380 C1orf115Q9H7X2 142 aa15.11■□□□□ 0.01
EPHB6-209ENST00000616380 TCOF1Q13428 1488 aaKnown RBP15.11■□□□□ 0.01
EPHB6-209ENST00000616380 MCM4P33991 863 aa15.1■□□□□ 0.01
EPHB6-209ENST00000616380 MARCH6O60337 910 aa15.1■□□□□ 0.01
EPHB6-209ENST00000616380 CAVIN1Q6NZI2 390 aaKnown RBP15.1■□□□□ 0.01
EPHB6-209ENST00000616380 CCDC47Q96A33 483 aaKnown RBP15.1■□□□□ 0.01
EPHB6-209ENST00000616380 R3HCC1Q9Y3T6 440 aaKnown RBP15.1■□□□□ 0.01
EPHB6-209ENST00000616380 TOM1O60784 492 aa15.1■□□□□ 0.01
EPHB6-209ENST00000616380 NEUROD6Q96NK8 337 aa15.1■□□□□ 0.01
EPHB6-209ENST00000616380 GNAT3A8MTJ3 354 aa15.1■□□□□ 0.01
EPHB6-209ENST00000616380 GPS2Q13227 327 aa15.1■□□□□ 0.01
EPHB6-209ENST00000616380 NAT10Q9H0A0 1025 aaKnown RBP15.1■□□□□ 0.01
EPHB6-209ENST00000616380 RIMS2Q9UQ26 1411 aa15.09■□□□□ 0.01
EPHB6-209ENST00000616380 CREBRFQ8IUR6 639 aa15.09■□□□□ 0.01
EPHB6-209ENST00000616380 DUSP27Q5VZP5 1158 aa15.09■□□□□ 0.01
EPHB6-209ENST00000616380 ERICH2A1L162 156 aa15.09■□□□□ 0.01
EPHB6-209ENST00000616380 NOC3LQ8WTT2 800 aaKnown RBP15.09■□□□□ 0.01
EPHB6-209ENST00000616380 WDR33Q9C0J8 1336 aaKnown RBP15.09■□□□□ 0.01
EPHB6-209ENST00000616380 IPO7O95373 1038 aaKnown RBP15.08■□□□□ 0.01
EPHB6-209ENST00000616380 KLHL34Q8N239 644 aa15.08■□□□□ 0.01
EPHB6-209ENST00000616380 PTPRKQ15262 1439 aa15.08■□□□□ 0
EPHB6-209ENST00000616380 CLSTN1O94985 981 aa15.08■□□□□ 0
EPHB6-209ENST00000616380 ANKRD1Q15327 319 aa15.08■□□□□ 0
EPHB6-209ENST00000616380 TMEM57Q8N5G2 664 aa15.08■□□□□ 0
EPHB6-209ENST00000616380 ZMYM3Q14202 1370 aa15.08■□□□□ 0
EPHB6-209ENST00000616380 AEBP1Q8IUX7 1158 aa15.08■□□□□ 0
EPHB6-209ENST00000616380 NGLY1Q96IV0 654 aa15.08■□□□□ 0
EPHB6-209ENST00000616380 NPHP3Q7Z494 1330 aa15.07■□□□□ 0
EPHB6-209ENST00000616380 PRPF40AO75400 957 aaKnown RBP15.07■□□□□ 0
EPHB6-209ENST00000616380 BTBD11A6QL63 1104 aa15.07■□□□□ 0
EPHB6-209ENST00000616380 IFT57Q9NWB7 429 aa15.07■□□□□ 0
EPHB6-209ENST00000616380 RALGAPBQ86X10 1494 aa15.07■□□□□ 0
EPHB6-209ENST00000616380 DCAF8L1A6NGE4 600 aa15.07■□□□□ 0
EPHB6-209ENST00000616380 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
EPHB6-209ENST00000616380 NFXL1Q6ZNB6 911 aa15.07■□□□□ 0
EPHB6-209ENST00000616380 TTC21BQ7Z4L5 1316 aa15.07■□□□□ 0
EPHB6-209ENST00000616380 TSPY26PQ9H489 355 aa15.06■□□□□ 0
EPHB6-209ENST00000616380 PES1O00541 588 aaKnown RBP15.06■□□□□ 0
EPHB6-209ENST00000616380 ACEP12821 1306 aa15.06■□□□□ 0
EPHB6-209ENST00000616380 STARD3NLO95772 234 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms