RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 MBIPQ9NS73 344 aa17.26■□□□□ 0.35
SSBP2-220ENST00000615665 HDAC1Q13547 482 aaPredicted RBP17.25■□□□□ 0.35
SSBP2-220ENST00000615665 CEBPAP49715 358 aaPredicted RBP17.25■□□□□ 0.35
SSBP2-220ENST00000615665 FGD1P98174 961 aa17.25■□□□□ 0.35
SSBP2-220ENST00000615665 SKOR2Q2VWA4 1001 aaPredicted RBP17.24■□□□□ 0.35
SSBP2-220ENST00000615665 AMOTL2Q9Y2J4 779 aa17.24■□□□□ 0.35
SSBP2-220ENST00000615665 PLCB2Q00722 1185 aa17.24■□□□□ 0.35
SSBP2-220ENST00000615665 ANO8Q9HCE9 1232 aaPredicted RBP17.24■□□□□ 0.35
SSBP2-220ENST00000615665 CCT4P50991 539 aaKnown RBP17.24■□□□□ 0.35
SSBP2-220ENST00000615665 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
SSBP2-220ENST00000615665 ACEP12821 1306 aa17.23■□□□□ 0.35
SSBP2-220ENST00000615665 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
SSBP2-220ENST00000615665 UBTFL1P0CB47 393 aaPredicted RBP17.23■□□□□ 0.35
SSBP2-220ENST00000615665 GNAI2P04899 355 aa17.23■□□□□ 0.35
SSBP2-220ENST00000615665 ABCA9Q8IUA7 1624 aa17.22■□□□□ 0.35
SSBP2-220ENST00000615665 RNF17Q9BXT8 1623 aaKnown RBP17.22■□□□□ 0.35
SSBP2-220ENST00000615665 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
SSBP2-220ENST00000615665 C9orf78Q9NZ63 289 aaPredicted RBP17.22■□□□□ 0.35
SSBP2-220ENST00000615665 ESCO1Q5FWF5 840 aa17.22■□□□□ 0.35
SSBP2-220ENST00000615665 DDX49Q9Y6V7 483 aaKnown RBP17.22■□□□□ 0.35
SSBP2-220ENST00000615665 MIS18AQ9NYP9 233 aa17.22■□□□□ 0.35
SSBP2-220ENST00000615665 NCBP3Q53F19 620 aaKnown RBP17.21■□□□□ 0.35
SSBP2-220ENST00000615665 ANO2Q9NQ90 1003 aa17.21■□□□□ 0.35
SSBP2-220ENST00000615665 ABCC3O15438 1527 aa17.21■□□□□ 0.35
SSBP2-220ENST00000615665 TBC1D32Q96NH3 1257 aa17.21■□□□□ 0.34
SSBP2-220ENST00000615665 ARHGAP45Q92619 1136 aa17.2■□□□□ 0.34
SSBP2-220ENST00000615665 TRIM35Q9UPQ4 493 aa17.2■□□□□ 0.34
SSBP2-220ENST00000615665 FOXD4L5Q5VV16 416 aaPredicted RBP17.2■□□□□ 0.34
SSBP2-220ENST00000615665 FOXD4L4Q8WXT5 416 aaPredicted RBP17.2■□□□□ 0.34
SSBP2-220ENST00000615665 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
SSBP2-220ENST00000615665 RSPH6AQ9H0K4 717 aa17.2■□□□□ 0.34
SSBP2-220ENST00000615665 TTC21BQ7Z4L5 1316 aa17.2■□□□□ 0.34
SSBP2-220ENST00000615665 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
SSBP2-220ENST00000615665 TBC1D2Q9BYX2 928 aa17.19■□□□□ 0.34
SSBP2-220ENST00000615665 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
SSBP2-220ENST00000615665 RABEP1Q15276 862 aa17.18■□□□□ 0.34
SSBP2-220ENST00000615665 NCKAP5LQ9HCH0 1330 aa17.17■□□□□ 0.34
SSBP2-220ENST00000615665 ABCA6Q8N139 1617 aa17.17■□□□□ 0.34
SSBP2-220ENST00000615665 NUCB2P80303 420 aa17.17■□□□□ 0.34
SSBP2-220ENST00000615665 GNAT3A8MTJ3 354 aa17.17■□□□□ 0.34
SSBP2-220ENST00000615665 TRAK2O60296 914 aa17.17■□□□□ 0.34
SSBP2-220ENST00000615665 MRPL50Q8N5N7 158 aaKnown RBP17.17■□□□□ 0.34
SSBP2-220ENST00000615665 INO80Q9ULG1 1556 aaPredicted RBP17.17■□□□□ 0.34
SSBP2-220ENST00000615665 HSP90AB4PQ58FF6 505 aa17.17■□□□□ 0.34
SSBP2-220ENST00000615665 ANKLE2Q86XL3 938 aa17.17■□□□□ 0.34
SSBP2-220ENST00000615665 DIAPH3Q9NSV4 1193 aa17.17■□□□□ 0.34
SSBP2-220ENST00000615665 PLEKHO1Q53GL0 409 aaPredicted RBP17.16■□□□□ 0.34
SSBP2-220ENST00000615665 HSP90AB2PQ58FF8 381 aa17.16■□□□□ 0.34
SSBP2-220ENST00000615665 DDX58O95786 925 aaKnown RBP17.16■□□□□ 0.34
SSBP2-220ENST00000615665 NUCB1Q02818 461 aa17.16■□□□□ 0.34
SSBP2-220ENST00000615665 NEXNQ0ZGT2 675 aa17.16■□□□□ 0.34
SSBP2-220ENST00000615665 SYAP1Q96A49 352 aaPredicted RBP17.16■□□□□ 0.34
SSBP2-220ENST00000615665 VAMP4O75379 141 aa17.16■□□□□ 0.34
SSBP2-220ENST00000615665 CHMP3Q9Y3E7 222 aa17.16■□□□□ 0.34
SSBP2-220ENST00000615665 GOLGA6L4A6NEF3 574 aa17.15■□□□□ 0.34
SSBP2-220ENST00000615665 AEBP1Q8IUX7 1158 aa17.15■□□□□ 0.34
SSBP2-220ENST00000615665 C8orf58Q8NAV2 365 aa17.15■□□□□ 0.34
SSBP2-220ENST00000615665 NAP1L2Q9ULW6 460 aaPredicted RBP17.15■□□□□ 0.34
SSBP2-220ENST00000615665 CEP152O94986 1710 aa17.15■□□□□ 0.34
SSBP2-220ENST00000615665 EDC4Q6P2E9 1401 aaKnown RBP17.15■□□□□ 0.34
SSBP2-220ENST00000615665 MSNP26038 577 aaKnown RBP17.15■□□□□ 0.34
SSBP2-220ENST00000615665 SURF6O75683 361 aaKnown RBP17.15■□□□□ 0.34
SSBP2-220ENST00000615665 EIF4A2Q14240 407 aaKnown RBP17.15■□□□□ 0.34
SSBP2-220ENST00000615665 BMP2KLQ5H9B9 411 aa17.15■□□□□ 0.34
SSBP2-220ENST00000615665 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
SSBP2-220ENST00000615665 IL27Q8NEV9 243 aa17.15■□□□□ 0.34
SSBP2-220ENST00000615665 ZBTB40Q9NUA8 1239 aa17.15■□□□□ 0.34
SSBP2-220ENST00000615665 K7ELQ4 463 aaPredicted RBP17.14■□□□□ 0.33
SSBP2-220ENST00000615665 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
SSBP2-220ENST00000615665 BRPF3Q9ULD4 1205 aa17.14■□□□□ 0.33
SSBP2-220ENST00000615665 ZNF330Q9Y3S2 320 aaPredicted RBP17.14■□□□□ 0.33
SSBP2-220ENST00000615665 IFIT2P09913 472 aaKnown RBP17.14■□□□□ 0.33
SSBP2-220ENST00000615665 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.33
SSBP2-220ENST00000615665 PTPRCP08575 1304 aa17.14■□□□□ 0.33
SSBP2-220ENST00000615665 SEC24BO95487 1268 aa17.13■□□□□ 0.33
SSBP2-220ENST00000615665 RUFY2Q8WXA3 655 aa17.13■□□□□ 0.33
SSBP2-220ENST00000615665 ADGRB3O60242 1522 aa17.13■□□□□ 0.33
SSBP2-220ENST00000615665 MCM4P33991 863 aa17.13■□□□□ 0.33
SSBP2-220ENST00000615665 ZNF530Q6P9A1 599 aaPredicted RBP17.13■□□□□ 0.33
SSBP2-220ENST00000615665 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
SSBP2-220ENST00000615665 SMC5Q8IY18 1101 aa17.13■□□□□ 0.33
SSBP2-220ENST00000615665 IL13P35225 146 aa17.12■□□□□ 0.33
SSBP2-220ENST00000615665 ERC2O15083 957 aa17.12■□□□□ 0.33
SSBP2-220ENST00000615665 LMTK2Q8IWU2 1503 aa17.12■□□□□ 0.33
SSBP2-220ENST00000615665 SRCIN1Q9C0H9 1055 aa17.12■□□□□ 0.33
SSBP2-220ENST00000615665 NLRP2Q9NX02 1062 aa17.12■□□□□ 0.33
SSBP2-220ENST00000615665 TTC21AQ8NDW8 1320 aa17.12■□□□□ 0.33
SSBP2-220ENST00000615665 F6X3S4 739 aa17.11■□□□□ 0.33
SSBP2-220ENST00000615665 ARHGAP31Q2M1Z3 1444 aa17.11■□□□□ 0.33
SSBP2-220ENST00000615665 CIZ1Q9ULV3 898 aaPredicted RBP17.11■□□□□ 0.33
SSBP2-220ENST00000615665 PPRC1Q5VV67 1664 aaKnown RBP17.11■□□□□ 0.33
SSBP2-220ENST00000615665 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
SSBP2-220ENST00000615665 AIMP1Q12904 312 aaKnown RBP17.1■□□□□ 0.33
SSBP2-220ENST00000615665 G3BP1Q13283 466 aaKnown RBP eCLIP17.1■□□□□ 0.33
SSBP2-220ENST00000615665 MCTP1Q6DN14 999 aa17.1■□□□□ 0.33
SSBP2-220ENST00000615665 EXOC6BQ9Y2D4 811 aa17.1■□□□□ 0.33
SSBP2-220ENST00000615665 NEK4P51957 841 aa17.1■□□□□ 0.33
SSBP2-220ENST00000615665 PROSER2Q86WR7 435 aaPredicted RBP17.1■□□□□ 0.33
SSBP2-220ENST00000615665 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
SSBP2-220ENST00000615665 ATF3P18847 181 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 760.9 ms