RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 FAM184AQ8NB25 1140 aa11.51□□□□□ -0.57
CLTCL1-208ENST00000615606 ANO2Q9NQ90 1003 aa11.51□□□□□ -0.57
CLTCL1-208ENST00000615606 TBC1D2BQ9UPU7 963 aa11.51□□□□□ -0.57
CLTCL1-208ENST00000615606 CLSTN1O94985 981 aa11.5□□□□□ -0.57
CLTCL1-208ENST00000615606 MCM10Q7L590 875 aa11.5□□□□□ -0.57
CLTCL1-208ENST00000615606 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-208ENST00000615606 RASSF8Q8NHQ8 419 aa11.5□□□□□ -0.57
CLTCL1-208ENST00000615606 ANKRD24Q8TF21 1146 aa11.5□□□□□ -0.57
CLTCL1-208ENST00000615606 GCC1Q96CN9 775 aa11.5□□□□□ -0.57
CLTCL1-208ENST00000615606 ARHGEF12Q9NZN5 1544 aa11.5□□□□□ -0.57
CLTCL1-208ENST00000615606 MARCH6O60337 910 aa11.5□□□□□ -0.57
CLTCL1-208ENST00000615606 WASHC4Q2M389 1173 aa11.5□□□□□ -0.57
CLTCL1-208ENST00000615606 GNL3LQ9NVN8 582 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-208ENST00000615606 CNTROBQ8N137 903 aa11.49□□□□□ -0.57
CLTCL1-208ENST00000615606 CTDP1Q9Y5B0 961 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-208ENST00000615606 H3BQV1 296 aa11.49□□□□□ -0.57
CLTCL1-208ENST00000615606 KCNA6P17658 529 aa11.49□□□□□ -0.57
CLTCL1-208ENST00000615606 IFFO2Q5TF58 517 aa11.49□□□□□ -0.57
CLTCL1-208ENST00000615606 DUSP27Q5VZP5 1158 aa11.49□□□□□ -0.57
CLTCL1-208ENST00000615606 IFNL2Q8IZJ0 200 aa11.49□□□□□ -0.57
CLTCL1-208ENST00000615606 ZNF652Q9Y2D9 606 aa11.49□□□□□ -0.57
CLTCL1-208ENST00000615606 MYO5CQ9NQX4 1742 aa11.49□□□□□ -0.57
CLTCL1-208ENST00000615606 BCAR3O75815 825 aa11.49□□□□□ -0.57
CLTCL1-208ENST00000615606 CCDC27Q2M243 656 aa11.49□□□□□ -0.57
CLTCL1-208ENST00000615606 SLFN5Q08AF3 891 aa11.48□□□□□ -0.57
CLTCL1-208ENST00000615606 ARHGEF5Q12774 1597 aa11.48□□□□□ -0.57
CLTCL1-208ENST00000615606 TRPM2O94759 1503 aa11.48□□□□□ -0.57
CLTCL1-208ENST00000615606 PZPP20742 1482 aa11.48□□□□□ -0.57
CLTCL1-208ENST00000615606 ERICH2A1L162 156 aa11.48□□□□□ -0.57
CLTCL1-208ENST00000615606 PTCD1O75127 700 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-208ENST00000615606 IPO9Q96P70 1041 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-208ENST00000615606 YTHDC2Q9H6S0 1430 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-208ENST00000615606 CCDC57Q2TAC2 916 aa11.48□□□□□ -0.57
CLTCL1-208ENST00000615606 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
CLTCL1-208ENST00000615606 FSD1Q9BTV5 496 aa11.48□□□□□ -0.57
CLTCL1-208ENST00000615606 CDC45O75419 566 aa11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 SF3A1Q15459 793 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 CCDC158Q5M9N0 1113 aa11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 MPHOSPH8Q99549 860 aa11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 CHRNA2Q15822 529 aa11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 NAP1L5Q96NT1 182 aaPredicted RBP11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 ATP6V1DQ9Y5K8 247 aa11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 HIP1O00291 1037 aa11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 VPS53Q5VIR6 699 aa11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 MPRIPQ6WCQ1 1025 aa11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 THUMPD2Q9BTF0 503 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 CPLX1O14810 134 aa11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 RAD21O60216 631 aa11.47□□□□□ -0.57
CLTCL1-208ENST00000615606 FYB1O15117 783 aa11.46□□□□□ -0.57
CLTCL1-208ENST00000615606 MVPQ14764 893 aaKnown RBP11.46□□□□□ -0.57
CLTCL1-208ENST00000615606 RALYLQ86SE5 291 aaKnown RBP11.46□□□□□ -0.57
CLTCL1-208ENST00000615606 FMNL2Q96PY5 1086 aa11.46□□□□□ -0.57
CLTCL1-208ENST00000615606 TRIM29Q14134 588 aa11.46□□□□□ -0.58
CLTCL1-208ENST00000615606 DCTN1Q14203 1278 aa11.46□□□□□ -0.58
CLTCL1-208ENST00000615606 L1TD1Q5T7N2 865 aaKnown RBP11.46□□□□□ -0.58
CLTCL1-208ENST00000615606 MIS18AQ9NYP9 233 aa11.46□□□□□ -0.58
CLTCL1-208ENST00000615606 PPP1R1BQ9UD71 204 aaPredicted RBP11.46□□□□□ -0.58
CLTCL1-208ENST00000615606 LARP1Q6PKG0 1096 aaKnown RBP11.46□□□□□ -0.58
CLTCL1-208ENST00000615606 TEX13AQ9BXU3 409 aaPredicted RBP11.46□□□□□ -0.58
CLTCL1-208ENST00000615606 C1orf115Q9H7X2 142 aa11.46□□□□□ -0.58
CLTCL1-208ENST00000615606 MAGI2Q86UL8 1455 aa11.46□□□□□ -0.58
CLTCL1-208ENST00000615606 LMTK3Q96Q04 1460 aa11.45□□□□□ -0.58
CLTCL1-208ENST00000615606 ALDH1L2Q3SY69 923 aa11.45□□□□□ -0.58
CLTCL1-208ENST00000615606 TTC39AQ5SRH9 613 aa11.45□□□□□ -0.58
CLTCL1-208ENST00000615606 NFXL1Q6ZNB6 911 aa11.45□□□□□ -0.58
CLTCL1-208ENST00000615606 ABCC1P33527 1531 aa11.45□□□□□ -0.58
CLTCL1-208ENST00000615606 ZPR1O75312 459 aa11.45□□□□□ -0.58
CLTCL1-208ENST00000615606 TPM4P67936 248 aa11.45□□□□□ -0.58
CLTCL1-208ENST00000615606 LRRC59Q96AG4 307 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-208ENST00000615606 MAGI3Q5TCQ9 1506 aa11.44□□□□□ -0.58
CLTCL1-208ENST00000615606 HSP90AB3PQ58FF7 597 aa11.44□□□□□ -0.58
CLTCL1-208ENST00000615606 DNAJC2Q99543 621 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-208ENST00000615606 YEATS2Q9ULM3 1422 aa11.44□□□□□ -0.58
CLTCL1-208ENST00000615606 ASXL1Q8IXJ9 1541 aa11.44□□□□□ -0.58
CLTCL1-208ENST00000615606 DHX16O60231 1041 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-208ENST00000615606 DRC7Q8IY82 874 aa11.44□□□□□ -0.58
CLTCL1-208ENST00000615606 LRRCC1Q9C099 1032 aa11.44□□□□□ -0.58
CLTCL1-208ENST00000615606 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.44□□□□□ -0.58
CLTCL1-208ENST00000615606 NPATQ14207 1427 aa11.44□□□□□ -0.58
CLTCL1-208ENST00000615606 TMEM2Q9UHN6 1383 aa11.43□□□□□ -0.58
CLTCL1-208ENST00000615606 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.43□□□□□ -0.586e-6■■■□□ 19.2
CLTCL1-208ENST00000615606 DEKP35659 375 aaKnown RBP11.43□□□□□ -0.58
CLTCL1-208ENST00000615606 RPAP2Q8IXW5 612 aaPredicted RBP11.43□□□□□ -0.58
CLTCL1-208ENST00000615606 CEP126Q9P2H0 1117 aa11.43□□□□□ -0.58
CLTCL1-208ENST00000615606 SRGAP3O43295 1099 aa11.43□□□□□ -0.58
CLTCL1-208ENST00000615606 IGHMBP2P38935 993 aaKnown RBP11.43□□□□□ -0.58
CLTCL1-208ENST00000615606 BICDL1Q6ZP65 573 aa11.43□□□□□ -0.58
CLTCL1-208ENST00000615606 HYPKQ9NX55 129 aa11.43□□□□□ -0.58
CLTCL1-208ENST00000615606 DBF4Q9UBU7 674 aaPredicted RBP11.42□□□□□ -0.58
CLTCL1-208ENST00000615606 HSP90AB2PQ58FF8 381 aa11.42□□□□□ -0.58
CLTCL1-208ENST00000615606 SIL1Q9H173 461 aa11.42□□□□□ -0.58
CLTCL1-208ENST00000615606 PDZRN3Q9UPQ7 1066 aa11.42□□□□□ -0.58
CLTCL1-208ENST00000615606 ZCCHC11Q5TAX3 1644 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-208ENST00000615606 PSMA5P28066 241 aa11.42□□□□□ -0.58
CLTCL1-208ENST00000615606 MBD5Q9P267 1494 aa11.42□□□□□ -0.58
CLTCL1-208ENST00000615606 SLC3A2P08195 630 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-208ENST00000615606 ZCRB1Q8TBF4 217 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-208ENST00000615606 MLH3Q9UHC1 1453 aa11.41□□□□□ -0.58
CLTCL1-208ENST00000615606 FLT4P35916 1363 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms