RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 NACAP1Q9BZK3 213 aa11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 DRC7Q8IY82 874 aa11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 TARBP1Q13395 1621 aaKnown RBP11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 GNAI2P04899 355 aa11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 TPRNQ4KMQ1 711 aa11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 CEP89Q96ST8 783 aa11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 SLC12A5Q9H2X9 1139 aa11.81□□□□□ -0.52
TNFRSF9-204ENST00000615230 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
TNFRSF9-204ENST00000615230 WASHC4Q2M389 1173 aa11.81□□□□□ -0.52
TNFRSF9-204ENST00000615230 NBPF1Q3BBV0 1214 aa11.81□□□□□ -0.52
TNFRSF9-204ENST00000615230 IFNL2Q8IZJ0 200 aa11.81□□□□□ -0.52
TNFRSF9-204ENST00000615230 SRCIN1Q9C0H9 1055 aa11.81□□□□□ -0.52
TNFRSF9-204ENST00000615230 POLD1P28340 1107 aa11.8□□□□□ -0.52
TNFRSF9-204ENST00000615230 ST5P78524 1137 aa11.8□□□□□ -0.52
TNFRSF9-204ENST00000615230 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
TNFRSF9-204ENST00000615230 NFE2L2Q16236 605 aa11.8□□□□□ -0.52
TNFRSF9-204ENST00000615230 ZNF287Q9HBT7 754 aa11.8□□□□□ -0.52
TNFRSF9-204ENST00000615230 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF9-204ENST00000615230 DNTTIP2Q5QJE6 756 aaKnown RBP11.8□□□□□ -0.52
TNFRSF9-204ENST00000615230 TCP11L2Q8N4U5 519 aa11.8□□□□□ -0.52
TNFRSF9-204ENST00000615230 NBR1Q14596 966 aa11.79□□□□□ -0.52
TNFRSF9-204ENST00000615230 TBX22Q9Y458 520 aa11.79□□□□□ -0.52
TNFRSF9-204ENST00000615230 MYO5CQ9NQX4 1742 aa11.79□□□□□ -0.52
TNFRSF9-204ENST00000615230 AKAP2Q9Y2D5 859 aa11.79□□□□□ -0.52
TNFRSF9-204ENST00000615230 RPGRQ92834 1020 aaKnown RBP11.79□□□□□ -0.52
TNFRSF9-204ENST00000615230 XPCQ01831 940 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF9-204ENST00000615230 DISP1Q96F81 1524 aa11.79□□□□□ -0.52
TNFRSF9-204ENST00000615230 WAPLQ7Z5K2 1190 aa11.79□□□□□ -0.52
TNFRSF9-204ENST00000615230 FMNL2Q96PY5 1086 aa11.78□□□□□ -0.52
TNFRSF9-204ENST00000615230 TRAPPC8Q9Y2L5 1435 aa11.78□□□□□ -0.52
TNFRSF9-204ENST00000615230 GCC1Q96CN9 775 aa11.78□□□□□ -0.52
TNFRSF9-204ENST00000615230 NOP58Q9Y2X3 529 aaKnown RBP11.78□□□□□ -0.52
TNFRSF9-204ENST00000615230 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.52
TNFRSF9-204ENST00000615230 ARHGEF10O15013 1369 aa11.77□□□□□ -0.53
TNFRSF9-204ENST00000615230 KCNA6P17658 529 aa11.77□□□□□ -0.53
TNFRSF9-204ENST00000615230 TPD52L1Q16890 204 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF9-204ENST00000615230 IFT57Q9NWB7 429 aa11.77□□□□□ -0.53
TNFRSF9-204ENST00000615230 TAF7Q15545 349 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 BCL11BQ9C0K0 894 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 PPP1R42Q7Z4L9 355 aa11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 HYPKQ9NX55 129 aa11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 SAMD9Q5K651 1589 aa11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 DNMT1P26358 1616 aaKnown RBP11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 FOXO3O43524 673 aa11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 PLIN1O60240 522 aa11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 IKQ13123 557 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 ANKRD20A12PQ8NF67 263 aa11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 NCKAP5LQ9HCH0 1330 aa11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 CHD1O14646 1710 aa11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 CAVIN4Q5BKX8 364 aa11.76□□□□□ -0.53
TNFRSF9-204ENST00000615230 RBM5P52756 815 aaKnown RBP eCLIP11.75□□□□□ -0.53
TNFRSF9-204ENST00000615230 TPM1P09493 284 aa11.75□□□□□ -0.53
TNFRSF9-204ENST00000615230 TSR1Q2NL82 804 aaKnown RBP11.75□□□□□ -0.53
TNFRSF9-204ENST00000615230 FSD1Q9BTV5 496 aa11.75□□□□□ -0.53
TNFRSF9-204ENST00000615230 FAM177BA6PVY3 158 aa11.75□□□□□ -0.53
TNFRSF9-204ENST00000615230 ADGRF5Q8IZF2 1346 aa11.75□□□□□ -0.53
TNFRSF9-204ENST00000615230 ARHGEF5Q12774 1597 aa11.75□□□□□ -0.53
TNFRSF9-204ENST00000615230 PPIP5K1Q6PFW1 1433 aa11.75□□□□□ -0.53
TNFRSF9-204ENST00000615230 KRI1Q8N9T8 703 aaKnown RBP11.74□□□□□ -0.53
TNFRSF9-204ENST00000615230 R3HCC1Q9Y3T6 440 aaKnown RBP11.74□□□□□ -0.53
TNFRSF9-204ENST00000615230 ADGBQ8N7X0 1667 aa11.74□□□□□ -0.53
TNFRSF9-204ENST00000615230 RRS1Q15050 365 aaKnown RBP11.74□□□□□ -0.53
TNFRSF9-204ENST00000615230 ANKRD24Q8TF21 1146 aa11.74□□□□□ -0.53
TNFRSF9-204ENST00000615230 BCL2L13Q9BXK5 485 aa11.74□□□□□ -0.53
TNFRSF9-204ENST00000615230 ACEP12821 1306 aa11.74□□□□□ -0.53
TNFRSF9-204ENST00000615230 SLC4A2P04920 1241 aa11.74□□□□□ -0.53
TNFRSF9-204ENST00000615230 RFC4P35249 363 aa11.73□□□□□ -0.53
TNFRSF9-204ENST00000615230 COG6Q9Y2V7 657 aa11.73□□□□□ -0.53
TNFRSF9-204ENST00000615230 CDC45O75419 566 aa11.73□□□□□ -0.53
TNFRSF9-204ENST00000615230 FAM161AQ3B820 660 aa11.73□□□□□ -0.53
TNFRSF9-204ENST00000615230 NYXQ9GZU5 481 aa11.73□□□□□ -0.53
TNFRSF9-204ENST00000615230 IFIT1P09914 478 aaKnown RBP11.73□□□□□ -0.53
TNFRSF9-204ENST00000615230 CEP126Q9P2H0 1117 aa11.73□□□□□ -0.53
TNFRSF9-204ENST00000615230 FYB1O15117 783 aa11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 SURF6O75683 361 aaKnown RBP11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 ABCC1P33527 1531 aa11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 MYL6BP14649 208 aa11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 ZCRB1Q8TBF4 217 aaKnown RBP11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 CTNNA3Q9UI47 895 aa11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 PDE3AQ14432 1141 aa11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 ADAMTS8Q9UP79 889 aa11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 ADGRL2O95490 1459 aa11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 DDB1Q16531 1140 aa11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 PPP4R3BQ5MIZ7 849 aa11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 C8orf37Q96NL8 207 aa11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 CDC5LQ99459 802 aaKnown RBP11.72□□□□□ -0.53
TNFRSF9-204ENST00000615230 RALGAPBQ86X10 1494 aa11.71□□□□□ -0.53
TNFRSF9-204ENST00000615230 ZFYVE9O95405 1425 aa11.71□□□□□ -0.53
TNFRSF9-204ENST00000615230 KDM5DQ9BY66 1539 aa11.71□□□□□ -0.53
TNFRSF9-204ENST00000615230 DDX11L8A8MPP1 907 aa11.71□□□□□ -0.54
TNFRSF9-204ENST00000615230 GLIPR1L2Q4G1C9 344 aa11.71□□□□□ -0.54
TNFRSF9-204ENST00000615230 TPM3P06753 285 aa11.71□□□□□ -0.54
TNFRSF9-204ENST00000615230 SLC5A1P13866 664 aa11.71□□□□□ -0.54
TNFRSF9-204ENST00000615230 ATF7IPQ6VMQ6 1270 aa11.71□□□□□ -0.54
TNFRSF9-204ENST00000615230 RAB11FIP3O75154 756 aa11.7□□□□□ -0.54
TNFRSF9-204ENST00000615230 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF9-204ENST00000615230 CNKSR2Q8WXI2 1034 aa11.7□□□□□ -0.54
TNFRSF9-204ENST00000615230 CRBNQ96SW2 442 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms