RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 MARF1Q9Y4F3 1742 aaKnown RBP24.72■■□□□ 1.55
MMP28-204ENST00000615136 MAP3K19Q56UN5 1328 aa24.71■■□□□ 1.55
MMP28-204ENST00000615136 NUTM2GQ5VZR2 741 aa24.71■■□□□ 1.55
MMP28-204ENST00000615136 PANK1Q8TE04 598 aa24.71■■□□□ 1.55
MMP28-204ENST00000615136 IL16Q14005 1332 aa24.71■■□□□ 1.55
MMP28-204ENST00000615136 ADGRL3Q9HAR2 1447 aa24.7■■□□□ 1.55
MMP28-204ENST00000615136 ANP32AP39687 249 aaKnown RBP24.7■■□□□ 1.54
MMP28-204ENST00000615136 SKAP1Q86WV1 359 aa24.7■■□□□ 1.54
MMP28-204ENST00000615136 DLG5Q8TDM6 1919 aa24.69■■□□□ 1.54
MMP28-204ENST00000615136 NEFMP07197 916 aa24.68■■□□□ 1.54
MMP28-204ENST00000615136 CANXP27824 592 aaKnown RBP24.68■■□□□ 1.54
MMP28-204ENST00000615136 NLRP6P59044 892 aa24.68■■□□□ 1.54
MMP28-204ENST00000615136 PHF8Q9UPP1 1060 aa24.68■■□□□ 1.54
MMP28-204ENST00000615136 RGPD1P0DJD0 1748 aa24.67■■□□□ 1.54
MMP28-204ENST00000615136 PDE3AQ14432 1141 aa24.67■■□□□ 1.54
MMP28-204ENST00000615136 SULT6B1Q6IMI4 303 aa24.67■■□□□ 1.54
MMP28-204ENST00000615136 NOP58Q9Y2X3 529 aaKnown RBP24.67■■□□□ 1.54
MMP28-204ENST00000615136 COG6Q9Y2V7 657 aa24.66■■□□□ 1.54
MMP28-204ENST00000615136 RLBP1P12271 317 aa24.66■■□□□ 1.54
MMP28-204ENST00000615136 CENPQQ7L2Z9 268 aaPredicted RBP24.66■■□□□ 1.54
MMP28-204ENST00000615136 PAK3O75914 559 aaPredicted RBP24.65■■□□□ 1.54
MMP28-204ENST00000615136 PDE4AP27815 886 aa24.65■■□□□ 1.54
MMP28-204ENST00000615136 BACH2Q9BYV9 841 aa24.65■■□□□ 1.54
MMP28-204ENST00000615136 IPO9Q96P70 1041 aaKnown RBP24.64■■□□□ 1.54
MMP28-204ENST00000615136 FAM83GA6ND36 823 aa24.64■■□□□ 1.53
MMP28-204ENST00000615136 LAS1LQ9Y4W2 734 aaKnown RBP24.64■■□□□ 1.53
MMP28-204ENST00000615136 NWD1Q149M9 1564 aa24.63■■□□□ 1.53
MMP28-204ENST00000615136 ABTB2Q8N961 1025 aa24.63■■□□□ 1.53
MMP28-204ENST00000615136 ESCO1Q5FWF5 840 aa24.62■■□□□ 1.53
MMP28-204ENST00000615136 C14orf37Q86TY3 774 aa24.62■■□□□ 1.53
MMP28-204ENST00000615136 SBNO1A3KN83 1393 aa24.62■■□□□ 1.53
MMP28-204ENST00000615136 FLT4P35916 1363 aa24.61■■□□□ 1.53
MMP28-204ENST00000615136 DCTN1Q14203 1278 aa24.61■■□□□ 1.53
MMP28-204ENST00000615136 SSH1Q8WYL5 1049 aa24.61■■□□□ 1.53
MMP28-204ENST00000615136 KDM4FA0A1W2PPD8 638 aa24.61■■□□□ 1.53
MMP28-204ENST00000615136 CLUAP1Q96AJ1 413 aa24.61■■□□□ 1.53
MMP28-204ENST00000615136 USP54Q70EL1 1684 aa24.61■■□□□ 1.53
MMP28-204ENST00000615136 CT47B1P0C2W7 299 aaPredicted RBP24.6■■□□□ 1.53
MMP28-204ENST00000615136 ORAI2Q96SN7 254 aa24.59■■□□□ 1.53
MMP28-204ENST00000615136 AMPHP49418 695 aa24.59■■□□□ 1.53
MMP28-204ENST00000615136 SMC4Q9NTJ3 1288 aa24.58■■□□□ 1.53
MMP28-204ENST00000615136 ZNF853P0CG23 659 aa24.57■■□□□ 1.52
MMP28-204ENST00000615136 PROSER2Q86WR7 435 aaPredicted RBP24.56■■□□□ 1.52
MMP28-204ENST00000615136 MBIPQ9NS73 344 aa24.56■■□□□ 1.52
MMP28-204ENST00000615136 ARHGEF10O15013 1369 aa24.54■■□□□ 1.52
MMP28-204ENST00000615136 HOXC9P31274 260 aa24.54■■□□□ 1.52
MMP28-204ENST00000615136 XPCQ01831 940 aaPredicted RBP24.54■■□□□ 1.52
MMP28-204ENST00000615136 EYA1Q99502 592 aa24.54■■□□□ 1.52
MMP28-204ENST00000615136 IFT57Q9NWB7 429 aa24.54■■□□□ 1.52
MMP28-204ENST00000615136 IGHDP01880 384 aa24.54■■□□□ 1.52
MMP28-204ENST00000615136 PSME1Q06323 249 aa24.54■■□□□ 1.52
MMP28-204ENST00000615136 TSPYL6Q8N831 410 aa24.54■■□□□ 1.52
MMP28-204ENST00000615136 HSPA2P54652 639 aa24.53■■□□□ 1.52
MMP28-204ENST00000615136 ZKSCAN2Q63HK3 967 aa24.53■■□□□ 1.52
MMP28-204ENST00000615136 STRCP1A6NGW2 1772 aa24.53■■□□□ 1.52
MMP28-204ENST00000615136 GNAI1P63096 354 aa24.52■■□□□ 1.52
MMP28-204ENST00000615136 FOXO3O43524 673 aa24.52■■□□□ 1.52
MMP28-204ENST00000615136 TRIM27P14373 513 aa24.52■■□□□ 1.52
MMP28-204ENST00000615136 LMOD3Q0VAK6 560 aa24.52■■□□□ 1.52
MMP28-204ENST00000615136 IGSF1Q8N6C5 1336 aa24.51■■□□□ 1.51
MMP28-204ENST00000615136 CALD1Q05682 793 aaKnown RBP24.51■■□□□ 1.51
MMP28-204ENST00000615136 NOB1Q9ULX3 412 aaKnown RBP24.51■■□□□ 1.51
MMP28-204ENST00000615136 MCM10Q7L590 875 aa24.51■■□□□ 1.51
MMP28-204ENST00000615136 CFAP44Q96MT7 982 aa24.51■■□□□ 1.51
MMP28-204ENST00000615136 KDRP35968 1356 aa24.5■■□□□ 1.51
MMP28-204ENST00000615136 ELL2O00472 640 aaPredicted RBP24.5■■□□□ 1.51
MMP28-204ENST00000615136 LTN1O94822 1766 aa24.49■■□□□ 1.51
MMP28-204ENST00000615136 VAMP4O75379 141 aa24.49■■□□□ 1.51
MMP28-204ENST00000615136 DZIP1LQ8IYY4 767 aaKnown RBP24.49■■□□□ 1.51
MMP28-204ENST00000615136 ZBTB47Q9UFB7 747 aaPredicted RBP24.49■■□□□ 1.51
MMP28-204ENST00000615136 NFAT5O94916 1531 aa24.48■■□□□ 1.51
MMP28-204ENST00000615136 MTHFSDQ2M296 383 aaKnown RBP24.48■■□□□ 1.51
MMP28-204ENST00000615136 LTV1Q96GA3 475 aaPredicted RBP24.48■■□□□ 1.51
MMP28-204ENST00000615136 C8orf58Q8NAV2 365 aa24.47■■□□□ 1.51
MMP28-204ENST00000615136 PCDHB15Q9Y5E8 787 aa24.47■■□□□ 1.51
MMP28-204ENST00000615136 MVPQ14764 893 aaKnown RBP24.47■■□□□ 1.51
MMP28-204ENST00000615136 ATF7IPQ6VMQ6 1270 aa24.47■■□□□ 1.51
MMP28-204ENST00000615136 KIF24Q5T7B8 1368 aa24.46■■□□□ 1.51
MMP28-204ENST00000615136 PLEKHG5O94827 1062 aa24.45■■□□□ 1.51
MMP28-204ENST00000615136 ALDH1L2Q3SY69 923 aa24.45■■□□□ 1.51
MMP28-204ENST00000615136 FTSJ3Q8IY81 847 aaKnown RBP24.45■■□□□ 1.51
MMP28-204ENST00000615136 C1orf167Q5SNV9 1468 aa24.45■■□□□ 1.51
MMP28-204ENST00000615136 C19orf44Q9H6X5 657 aa24.45■■□□□ 1.5
MMP28-204ENST00000615136 NPM2Q86SE8 214 aaKnown RBP24.44■■□□□ 1.5
MMP28-204ENST00000615136 TMEM94Q12767 1356 aa24.44■■□□□ 1.5
MMP28-204ENST00000615136 VIRMAQ69YN4 1812 aaKnown RBP24.44■■□□□ 1.5
MMP28-204ENST00000615136 AAMPQ13685 434 aa24.43■■□□□ 1.5
MMP28-204ENST00000615136 KRT24Q2M2I5 525 aa24.42■■□□□ 1.5
MMP28-204ENST00000615136 TWISTNBQ3B726 338 aaPredicted RBP24.42■■□□□ 1.5
MMP28-204ENST00000615136 TRPM3Q9HCF6 1732 aaPredicted RBP24.42■■□□□ 1.5
MMP28-204ENST00000615136 USHBP1Q8N6Y0 703 aa24.42■■□□□ 1.5
MMP28-204ENST00000615136 TMEM57Q8N5G2 664 aa24.41■■□□□ 1.5
MMP28-204ENST00000615136 MRPL50Q8N5N7 158 aaKnown RBP24.41■■□□□ 1.5
MMP28-204ENST00000615136 KIF16BQ96L93 1317 aa24.41■■□□□ 1.5
MMP28-204ENST00000615136 CRB1P82279 1406 aa24.41■■□□□ 1.5
MMP28-204ENST00000615136 ZBTB7CA1YPR0 619 aa24.4■■□□□ 1.5
MMP28-204ENST00000615136 RTL1A6NKG5 1358 aa24.4■■□□□ 1.5
MMP28-204ENST00000615136 CHL1O00533 1208 aa24.4■■□□□ 1.5
MMP28-204ENST00000615136 IP6K1Q92551 441 aa24.4■■□□□ 1.5
MMP28-204ENST00000615136 FAM161AQ3B820 660 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms