RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 NECTIN2Q92692 538 aa17.72■□□□□ 0.43
SNPH-203ENST00000614659 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
SNPH-203ENST00000614659 ATP10BO94823 1461 aa17.72■□□□□ 0.43
SNPH-203ENST00000614659 CHD1LQ86WJ1 897 aa17.71■□□□□ 0.43
SNPH-203ENST00000614659 VPS53Q5VIR6 699 aa17.71■□□□□ 0.43
SNPH-203ENST00000614659 CLASRPQ8N2M8 674 aaKnown RBP17.71■□□□□ 0.43
SNPH-203ENST00000614659 GNL3LQ9NVN8 582 aaKnown RBP17.71■□□□□ 0.43
SNPH-203ENST00000614659 TCEAL9Q9UHQ7 104 aa17.71■□□□□ 0.43
SNPH-203ENST00000614659 AIMP1Q12904 312 aaKnown RBP17.71■□□□□ 0.42
SNPH-203ENST00000614659 CCDC39Q9UFE4 941 aa17.71■□□□□ 0.42
SNPH-203ENST00000614659 ABCC2Q92887 1545 aa17.7■□□□□ 0.42
SNPH-203ENST00000614659 TMPOP42166 694 aaKnown RBP17.7■□□□□ 0.42
SNPH-203ENST00000614659 RPAP2Q8IXW5 612 aaPredicted RBP17.7■□□□□ 0.42
SNPH-203ENST00000614659 CEBPAP49715 358 aaPredicted RBP17.69■□□□□ 0.42
SNPH-203ENST00000614659 IDI1Q13907 227 aa17.69■□□□□ 0.42
SNPH-203ENST00000614659 ERICH2A1L162 156 aa17.69■□□□□ 0.42
SNPH-203ENST00000614659 AMOTQ4VCS5 1084 aa17.69■□□□□ 0.42
SNPH-203ENST00000614659 TPM1P09493 284 aa17.68■□□□□ 0.42
SNPH-203ENST00000614659 SULT6B1Q6IMI4 303 aa17.68■□□□□ 0.42
SNPH-203ENST00000614659 CPLX1O14810 134 aa17.68■□□□□ 0.42
SNPH-203ENST00000614659 IFT57Q9NWB7 429 aa17.68■□□□□ 0.42
SNPH-203ENST00000614659 NGLY1Q96IV0 654 aa17.68■□□□□ 0.42
SNPH-203ENST00000614659 K7ELQ4 463 aaPredicted RBP17.67■□□□□ 0.42
SNPH-203ENST00000614659 PDCP20941 246 aa17.67■□□□□ 0.42
SNPH-203ENST00000614659 STARD3NLO95772 234 aa17.67■□□□□ 0.42
SNPH-203ENST00000614659 NASPP49321 788 aaPredicted RBP17.67■□□□□ 0.42
SNPH-203ENST00000614659 TBC1D2BQ9UPU7 963 aa17.67■□□□□ 0.42
SNPH-203ENST00000614659 APPP05067 770 aa17.67■□□□□ 0.42
SNPH-203ENST00000614659 FBXO31Q5XUX0 539 aaPredicted RBP17.67■□□□□ 0.42
SNPH-203ENST00000614659 FAM43AQ8N2R8 423 aa17.67■□□□□ 0.42
SNPH-203ENST00000614659 BICD2Q8TD16 824 aa17.67■□□□□ 0.42
SNPH-203ENST00000614659 WASLO00401 505 aaPredicted RBP17.67■□□□□ 0.42
SNPH-203ENST00000614659 SASS6Q6UVJ0 657 aa17.67■□□□□ 0.42
SNPH-203ENST00000614659 ZNF652Q9Y2D9 606 aa17.67■□□□□ 0.42
SNPH-203ENST00000614659 ZNF771Q7L3S4 317 aaPredicted RBP17.66■□□□□ 0.42
SNPH-203ENST00000614659 PDIA4P13667 645 aaKnown RBP17.66■□□□□ 0.42
SNPH-203ENST00000614659 SETQ01105 290 aaPredicted RBP17.66■□□□□ 0.42
SNPH-203ENST00000614659 LRRCC1Q9C099 1032 aa17.66■□□□□ 0.42
SNPH-203ENST00000614659 TPM2P07951 284 aa17.66■□□□□ 0.42
SNPH-203ENST00000614659 RARSP54136 660 aaKnown RBP17.66■□□□□ 0.42
SNPH-203ENST00000614659 CCDC173Q0VFZ6 552 aa17.66■□□□□ 0.42
SNPH-203ENST00000614659 PRAG1Q86YV5 1406 aa17.65■□□□□ 0.42
SNPH-203ENST00000614659 VPS37CA5D8V6 355 aaPredicted RBP17.65■□□□□ 0.42
SNPH-203ENST00000614659 CCDC73Q6ZRK6 1079 aa17.65■□□□□ 0.42
SNPH-203ENST00000614659 SURF6O75683 361 aaKnown RBP17.65■□□□□ 0.42
SNPH-203ENST00000614659 ASXL1Q8IXJ9 1541 aa17.65■□□□□ 0.42
SNPH-203ENST00000614659 DNMT1P26358 1616 aaKnown RBP17.65■□□□□ 0.42
SNPH-203ENST00000614659 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
SNPH-203ENST00000614659 DISP3Q9P2K9 1392 aa17.65■□□□□ 0.42
SNPH-203ENST00000614659 IL16Q14005 1332 aa17.64■□□□□ 0.42
SNPH-203ENST00000614659 TPD52L1Q16890 204 aaPredicted RBP17.64■□□□□ 0.41
SNPH-203ENST00000614659 TSR1Q2NL82 804 aaKnown RBP17.64■□□□□ 0.41
SNPH-203ENST00000614659 AEBP1Q8IUX7 1158 aa17.64■□□□□ 0.41
SNPH-203ENST00000614659 ZC3H6P61129 1189 aaKnown RBP17.63■□□□□ 0.41
SNPH-203ENST00000614659 ANKRD36BQ8N2N9 1353 aa17.63■□□□□ 0.41
SNPH-203ENST00000614659 SLC3A2P08195 630 aaKnown RBP17.63■□□□□ 0.41
SNPH-203ENST00000614659 UBAP1LF5GYI3 381 aa17.63■□□□□ 0.41
SNPH-203ENST00000614659 HDGFL1Q5TGJ6 251 aa17.63■□□□□ 0.41
SNPH-203ENST00000614659 KRT28Q7Z3Y7 464 aa17.62■□□□□ 0.41
SNPH-203ENST00000614659 C14orf93Q9H972 538 aaKnown RBP17.62■□□□□ 0.41
SNPH-203ENST00000614659 PARD3Q8TEW0 1356 aa17.62■□□□□ 0.41
SNPH-203ENST00000614659 ANKRD1Q15327 319 aa17.62■□□□□ 0.41
SNPH-203ENST00000614659 DUSP27Q5VZP5 1158 aa17.62■□□□□ 0.41
SNPH-203ENST00000614659 NAT10Q9H0A0 1025 aaKnown RBP17.62■□□□□ 0.41
SNPH-203ENST00000614659 FAM13BQ9NYF5 915 aa17.62■□□□□ 0.41
SNPH-203ENST00000614659 TMOD3Q9NYL9 352 aa17.62■□□□□ 0.41
SNPH-203ENST00000614659 NEK4P51957 841 aa17.62■□□□□ 0.41
SNPH-203ENST00000614659 GPS2Q13227 327 aa17.62■□□□□ 0.41
SNPH-203ENST00000614659 NEUROD6Q96NK8 337 aa17.62■□□□□ 0.41
SNPH-203ENST00000614659 FSD1Q9BTV5 496 aa17.62■□□□□ 0.41
SNPH-203ENST00000614659 MTERF4Q7Z6M4 381 aaKnown RBP17.62■□□□□ 0.41
SNPH-203ENST00000614659 CCDC47Q96A33 483 aaKnown RBP17.62■□□□□ 0.41
SNPH-203ENST00000614659 FOXD4L6Q3SYB3 417 aaPredicted RBP17.61■□□□□ 0.41
SNPH-203ENST00000614659 FOXD4L3Q6VB84 417 aaPredicted RBP17.61■□□□□ 0.41
SNPH-203ENST00000614659 ANKRD20A12PQ8NF67 263 aa17.61■□□□□ 0.41
SNPH-203ENST00000614659 NPHP3Q7Z494 1330 aa17.61■□□□□ 0.41
SNPH-203ENST00000614659 A0A0U1RQG5 324 aaPredicted RBP17.61■□□□□ 0.41
SNPH-203ENST00000614659 PPP1R1BQ9UD71 204 aaPredicted RBP17.61■□□□□ 0.41
SNPH-203ENST00000614659 PRKCSHP14314 528 aaPredicted RBP17.61■□□□□ 0.41
SNPH-203ENST00000614659 XPCQ01831 940 aaPredicted RBP17.61■□□□□ 0.41
SNPH-203ENST00000614659 TSPY26PQ9H489 355 aa17.6■□□□□ 0.41
SNPH-203ENST00000614659 C1orf115Q9H7X2 142 aa17.6■□□□□ 0.41
SNPH-203ENST00000614659 NOS1P29475 1434 aa17.6■□□□□ 0.41
SNPH-203ENST00000614659 RAD21O60216 631 aa17.6■□□□□ 0.41
SNPH-203ENST00000614659 RALYLQ86SE5 291 aaKnown RBP17.6■□□□□ 0.41
SNPH-203ENST00000614659 DHX8Q14562 1220 aaKnown RBP17.6■□□□□ 0.41
SNPH-203ENST00000614659 IL27Q8NEV9 243 aa17.6■□□□□ 0.41
SNPH-203ENST00000614659 WDR33Q9C0J8 1336 aaKnown RBP17.6■□□□□ 0.41
SNPH-203ENST00000614659 DHX16O60231 1041 aaKnown RBP17.6■□□□□ 0.41
SNPH-203ENST00000614659 SAFBQ15424 915 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNPH-203ENST00000614659 ADGRF5Q8IZF2 1346 aa17.59■□□□□ 0.41
SNPH-203ENST00000614659 PUS7Q96PZ0 661 aaKnown RBP17.59■□□□□ 0.41
SNPH-203ENST00000614659 GNAT3A8MTJ3 354 aa17.59■□□□□ 0.41
SNPH-203ENST00000614659 EXOC5O00471 708 aa17.59■□□□□ 0.41
SNPH-203ENST00000614659 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
SNPH-203ENST00000614659 TMEM57Q8N5G2 664 aa17.59■□□□□ 0.41
SNPH-203ENST00000614659 ADGRL2O95490 1459 aa17.59■□□□□ 0.41
SNPH-203ENST00000614659 BTBD11A6QL63 1104 aa17.59■□□□□ 0.41
SNPH-203ENST00000614659 MAP7D2Q96T17 732 aa17.59■□□□□ 0.41
SNPH-203ENST00000614659 CNNM1Q9NRU3 951 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms