RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 NAP1L2Q9ULW6 460 aaPredicted RBP14.32□□□□□ -0.12
CDH5-208ENST00000614547 GNAI1P63096 354 aa14.31□□□□□ -0.12
CDH5-208ENST00000614547 HMMRO75330 724 aa14.31□□□□□ -0.12
CDH5-208ENST00000614547 CDK11BP21127 795 aaKnown RBP14.3□□□□□ -0.12
CDH5-208ENST00000614547 KRT24Q2M2I5 525 aa14.3□□□□□ -0.12
CDH5-208ENST00000614547 ZKSCAN5Q9Y2L8 839 aa14.3□□□□□ -0.12
CDH5-208ENST00000614547 POLR3AO14802 1390 aaPredicted RBP14.3□□□□□ -0.12
CDH5-208ENST00000614547 PHF14O94880 888 aa14.3□□□□□ -0.12
CDH5-208ENST00000614547 FBXW7Q969H0 707 aa14.3□□□□□ -0.12
CDH5-208ENST00000614547 PLA2R1Q13018 1463 aa14.3□□□□□ -0.12
CDH5-208ENST00000614547 NPHP1O15259 732 aa14.3□□□□□ -0.12
CDH5-208ENST00000614547 PLCH2O75038 1416 aa14.3□□□□□ -0.12
CDH5-208ENST00000614547 PRAM1Q96QH2 718 aa14.3□□□□□ -0.12
CDH5-208ENST00000614547 SLC26A8Q96RN1 970 aa14.3□□□□□ -0.12
CDH5-208ENST00000614547 SASS6Q6UVJ0 657 aa14.29□□□□□ -0.12
CDH5-208ENST00000614547 MBD3O95983 291 aa14.29□□□□□ -0.12
CDH5-208ENST00000614547 RRS1Q15050 365 aaKnown RBP14.29□□□□□ -0.12
CDH5-208ENST00000614547 CFAP44Q96MT7 982 aa14.29□□□□□ -0.12
CDH5-208ENST00000614547 TRIM35Q9UPQ4 493 aa14.29□□□□□ -0.12
CDH5-208ENST00000614547 ERC2O15083 957 aa14.29□□□□□ -0.12
CDH5-208ENST00000614547 CT47B1P0C2W7 299 aaPredicted RBP14.29□□□□□ -0.12
CDH5-208ENST00000614547 SDSP20132 328 aa14.29□□□□□ -0.12
CDH5-208ENST00000614547 F6X3S4 739 aa14.28□□□□□ -0.12
CDH5-208ENST00000614547 RTF1Q92541 710 aaKnown RBP14.28□□□□□ -0.12
CDH5-208ENST00000614547 TMEM63CQ9P1W3 806 aa14.28□□□□□ -0.12
CDH5-208ENST00000614547 WAPLQ7Z5K2 1190 aa14.28□□□□□ -0.12
CDH5-208ENST00000614547 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
CDH5-208ENST00000614547 IL1RAPL2Q9NP60 686 aa14.28□□□□□ -0.12
CDH5-208ENST00000614547 HCLS1P14317 486 aaPredicted RBP14.27□□□□□ -0.12
CDH5-208ENST00000614547 CWC22Q9HCG8 908 aaKnown RBP14.27□□□□□ -0.12
CDH5-208ENST00000614547 LMBRD1Q9NUN5 540 aa14.27□□□□□ -0.12
CDH5-208ENST00000614547 PHACTR3Q96KR7 559 aa14.27□□□□□ -0.13
CDH5-208ENST00000614547 IFT57Q9NWB7 429 aa14.27□□□□□ -0.13
CDH5-208ENST00000614547 EMILIN1Q9Y6C2 1016 aa14.27□□□□□ -0.13
CDH5-208ENST00000614547 VGFO15240 615 aaPredicted RBP14.27□□□□□ -0.13
CDH5-208ENST00000614547 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
CDH5-208ENST00000614547 FOSBP53539 338 aa14.26□□□□□ -0.13
CDH5-208ENST00000614547 PPP4R3BQ5MIZ7 849 aa14.26□□□□□ -0.13
CDH5-208ENST00000614547 LRSAM1Q6UWE0 723 aa14.26□□□□□ -0.13
CDH5-208ENST00000614547 C8orf58Q8NAV2 365 aa14.26□□□□□ -0.13
CDH5-208ENST00000614547 STAC3Q96MF2 364 aa14.26□□□□□ -0.13
CDH5-208ENST00000614547 NSFL1CQ9UNZ2 370 aaKnown RBP14.26□□□□□ -0.13
CDH5-208ENST00000614547 KDM5DQ9BY66 1539 aa14.26□□□□□ -0.13
CDH5-208ENST00000614547 TXNDC2Q86VQ3 553 aa14.26□□□□□ -0.13
CDH5-208ENST00000614547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDH5-208ENST00000614547 ZBTB7BO15156 539 aaPredicted RBP14.25□□□□□ -0.13
CDH5-208ENST00000614547 PLEKHM2Q8IWE5 1019 aa14.25□□□□□ -0.13
CDH5-208ENST00000614547 TMX3Q96JJ7 454 aa14.25□□□□□ -0.13
CDH5-208ENST00000614547 STK31Q9BXU1 1019 aa14.25□□□□□ -0.13
CDH5-208ENST00000614547 NOL7Q9UMY1 257 aaKnown RBP14.25□□□□□ -0.13
CDH5-208ENST00000614547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDH5-208ENST00000614547 FGD1P98174 961 aa14.25□□□□□ -0.13
CDH5-208ENST00000614547 FKBP5Q13451 457 aaPredicted RBP14.25□□□□□ -0.13
CDH5-208ENST00000614547 TTC22Q5TAA0 569 aa14.25□□□□□ -0.13
CDH5-208ENST00000614547 MCM10Q7L590 875 aa14.25□□□□□ -0.13
CDH5-208ENST00000614547 LTV1Q96GA3 475 aaPredicted RBP14.25□□□□□ -0.13
CDH5-208ENST00000614547 MBIPQ9NS73 344 aa14.25□□□□□ -0.13
CDH5-208ENST00000614547 ITSN2Q9NZM3 1697 aa14.25□□□□□ -0.13
CDH5-208ENST00000614547 ABCC10Q5T3U5 1492 aa14.25□□□□□ -0.13
CDH5-208ENST00000614547 GPT2Q8TD30 523 aa14.25□□□□□ -0.13
CDH5-208ENST00000614547 NOS1P29475 1434 aa14.25□□□□□ -0.13
CDH5-208ENST00000614547 GSPT1P15170 499 aaKnown RBP14.24□□□□□ -0.13
CDH5-208ENST00000614547 PPP1R9BQ96SB3 815 aa14.24□□□□□ -0.13
CDH5-208ENST00000614547 SMC3Q9UQE7 1217 aa14.24□□□□□ -0.13
CDH5-208ENST00000614547 ADCY5O95622 1261 aa14.24□□□□□ -0.13
CDH5-208ENST00000614547 NUTM2GQ5VZR2 741 aa14.24□□□□□ -0.13
CDH5-208ENST00000614547 ABCC2Q92887 1545 aa14.24□□□□□ -0.13
CDH5-208ENST00000614547 POLR1AO95602 1720 aaPredicted RBP14.24□□□□□ -0.13
CDH5-208ENST00000614547 TTC37Q6PGP7 1564 aa14.24□□□□□ -0.13
CDH5-208ENST00000614547 FERMT3Q86UX7 667 aa14.24□□□□□ -0.13
CDH5-208ENST00000614547 KIF3AQ9Y496 699 aa14.24□□□□□ -0.13
CDH5-208ENST00000614547 ABCA8O94911 1581 aa14.23□□□□□ -0.13
CDH5-208ENST00000614547 MEIS3Q99687 375 aa14.23□□□□□ -0.13
CDH5-208ENST00000614547 CAMK4Q16566 473 aa14.23□□□□□ -0.13
CDH5-208ENST00000614547 CCDC9Q9Y3X0 531 aaKnown RBP14.23□□□□□ -0.13
CDH5-208ENST00000614547 DYNC1I1O14576 645 aa14.23□□□□□ -0.13
CDH5-208ENST00000614547 NFE2L2Q16236 605 aa14.23□□□□□ -0.13
CDH5-208ENST00000614547 MTERF4Q7Z6M4 381 aaKnown RBP14.23□□□□□ -0.13
CDH5-208ENST00000614547 USP26Q9BXU7 913 aa14.23□□□□□ -0.13
CDH5-208ENST00000614547 FYB1O15117 783 aa14.22□□□□□ -0.13
CDH5-208ENST00000614547 VAMP4O75379 141 aa14.22□□□□□ -0.13
CDH5-208ENST00000614547 LMOD3Q0VAK6 560 aa14.22□□□□□ -0.13
CDH5-208ENST00000614547 GIMAP6Q6P9H5 292 aa14.22□□□□□ -0.13
CDH5-208ENST00000614547 ALDH1L2Q3SY69 923 aa14.22□□□□□ -0.13
CDH5-208ENST00000614547 PDCL2Q8N4E4 241 aa14.22□□□□□ -0.13
CDH5-208ENST00000614547 GADD45BO75293 160 aaPredicted RBP14.22□□□□□ -0.13
CDH5-208ENST00000614547 SULT6B1Q6IMI4 303 aa14.22□□□□□ -0.13
CDH5-208ENST00000614547 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
CDH5-208ENST00000614547 CDK19Q9BWU1 502 aa14.22□□□□□ -0.13
CDH5-208ENST00000614547 NUTM1Q86Y26 1132 aa14.21□□□□□ -0.13
CDH5-208ENST00000614547 GOLGA6L6A8MZA4 724 aa14.21□□□□□ -0.13
CDH5-208ENST00000614547 EIF2S2P20042 333 aaKnown RBP14.21□□□□□ -0.13
CDH5-208ENST00000614547 COG3Q96JB2 828 aa14.21□□□□□ -0.13
CDH5-208ENST00000614547 ZRANB1Q9UGI0 708 aa14.21□□□□□ -0.13
CDH5-208ENST00000614547 FCHSD2O94868 740 aa14.21□□□□□ -0.14
CDH5-208ENST00000614547 KIF2CQ99661 725 aa14.21□□□□□ -0.14
CDH5-208ENST00000614547 NCKAP5LQ9HCH0 1330 aa14.2□□□□□ -0.14
CDH5-208ENST00000614547 ZNF445P59923 1031 aa14.2□□□□□ -0.14
CDH5-208ENST00000614547 NOLC1Q14978 699 aaKnown RBP eCLIP14.2□□□□□ -0.14
CDH5-208ENST00000614547 USP48Q86UV5 1035 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms