RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 NEFMP07197 916 aa15.26■□□□□ 0.03
TUBD1-216ENST00000613721 RWDD1Q9H446 243 aaPredicted RBP15.26■□□□□ 0.03
TUBD1-216ENST00000613721 SSH1Q8WYL5 1049 aa15.26■□□□□ 0.03
TUBD1-216ENST00000613721 SIRT1Q96EB6 747 aa15.26■□□□□ 0.03
TUBD1-216ENST00000613721 AKAP12Q02952 1782 aa15.26■□□□□ 0.03
TUBD1-216ENST00000613721 PRKAR2BP31323 418 aa15.25■□□□□ 0.03
TUBD1-216ENST00000613721 RSPH6AQ9H0K4 717 aa15.25■□□□□ 0.03
TUBD1-216ENST00000613721 USP35Q9P2H5 1018 aa15.25■□□□□ 0.03
TUBD1-216ENST00000613721 TBX22Q9Y458 520 aa15.25■□□□□ 0.03
TUBD1-216ENST00000613721 EMILIN1Q9Y6C2 1016 aa15.25■□□□□ 0.03
TUBD1-216ENST00000613721 CDK12Q9NYV4 1490 aaPredicted RBP15.25■□□□□ 0.03
TUBD1-216ENST00000613721 TRIM27P14373 513 aa15.25■□□□□ 0.03
TUBD1-216ENST00000613721 RRS1Q15050 365 aaKnown RBP15.24■□□□□ 0.03
TUBD1-216ENST00000613721 ATF7IPQ6VMQ6 1270 aa15.24■□□□□ 0.03
TUBD1-216ENST00000613721 RGPD8O14715 1765 aaPredicted RBP15.23■□□□□ 0.03
TUBD1-216ENST00000613721 ACEP12821 1306 aa15.23■□□□□ 0.03
TUBD1-216ENST00000613721 KIF16BQ96L93 1317 aa15.23■□□□□ 0.03
TUBD1-216ENST00000613721 SOX12O15370 315 aa15.23■□□□□ 0.03
TUBD1-216ENST00000613721 DDX19BQ9UMR2 479 aa15.23■□□□□ 0.03
TUBD1-216ENST00000613721 PDZRN3Q9UPQ7 1066 aa15.23■□□□□ 0.03
TUBD1-216ENST00000613721 AATKQ6ZMQ8 1374 aa15.23■□□□□ 0.03
TUBD1-216ENST00000613721 SLC4A3P48751 1232 aa15.22■□□□□ 0.03
TUBD1-216ENST00000613721 ITPRIPQ8IWB1 547 aa15.21■□□□□ 0.03
TUBD1-216ENST00000613721 NOB1Q9ULX3 412 aaKnown RBP15.21■□□□□ 0.03
TUBD1-216ENST00000613721 USP19O94966 1318 aa15.21■□□□□ 0.03
TUBD1-216ENST00000613721 NFE2L2Q16236 605 aa15.21■□□□□ 0.02
TUBD1-216ENST00000613721 HMOX1P09601 288 aa15.2■□□□□ 0.02
TUBD1-216ENST00000613721 ALDH1L2Q3SY69 923 aa15.2■□□□□ 0.02
TUBD1-216ENST00000613721 COG3Q96JB2 828 aa15.2■□□□□ 0.02
TUBD1-216ENST00000613721 XRN1Q8IZH2 1706 aaKnown RBP15.2■□□□□ 0.02
TUBD1-216ENST00000613721 IPO8O15397 1037 aaKnown RBP15.19■□□□□ 0.02
TUBD1-216ENST00000613721 TOPAZ1Q8N9V7 1692 aa15.19■□□□□ 0.02
TUBD1-216ENST00000613721 DLG5Q8TDM6 1919 aa15.19■□□□□ 0.02
TUBD1-216ENST00000613721 DIP2AQ14689 1571 aa15.19■□□□□ 0.02
TUBD1-216ENST00000613721 IL13P35225 146 aa15.19■□□□□ 0.02
TUBD1-216ENST00000613721 CALD1Q05682 793 aaKnown RBP15.19■□□□□ 0.02
TUBD1-216ENST00000613721 ANKLE2Q86XL3 938 aa15.19■□□□□ 0.02
TUBD1-216ENST00000613721 ZNF428Q96B54 188 aa15.19■□□□□ 0.02
TUBD1-216ENST00000613721 PHACTR3Q96KR7 559 aa15.18■□□□□ 0.02
TUBD1-216ENST00000613721 PTCH1Q13635 1447 aa15.18■□□□□ 0.02
TUBD1-216ENST00000613721 SEC24BO95487 1268 aa15.18■□□□□ 0.02
TUBD1-216ENST00000613721 HDAC1Q13547 482 aaPredicted RBP15.18■□□□□ 0.02
TUBD1-216ENST00000613721 TMEM57Q8N5G2 664 aa15.18■□□□□ 0.02
TUBD1-216ENST00000613721 TTC21BQ7Z4L5 1316 aa15.17■□□□□ 0.02
TUBD1-216ENST00000613721 NRKQ7Z2Y5 1582 aa15.17■□□□□ 0.02
TUBD1-216ENST00000613721 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
TUBD1-216ENST00000613721 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
TUBD1-216ENST00000613721 ZNF142P52746 1687 aaPredicted RBP15.16■□□□□ 0.02
TUBD1-216ENST00000613721 NUTM2GQ5VZR2 741 aa15.16■□□□□ 0.02
TUBD1-216ENST00000613721 GNAI1P63096 354 aa15.15■□□□□ 0.02
TUBD1-216ENST00000613721 CNKSR2Q8WXI2 1034 aa15.15■□□□□ 0.02
TUBD1-216ENST00000613721 UPF2Q9HAU5 1272 aaKnown RBP15.15■□□□□ 0.02
TUBD1-216ENST00000613721 PLEKHG3A1L390 1219 aa15.15■□□□□ 0.02
TUBD1-216ENST00000613721 BRPF1P55201 1214 aaPredicted RBP15.15■□□□□ 0.02
TUBD1-216ENST00000613721 IFT57Q9NWB7 429 aa15.15■□□□□ 0.02
TUBD1-216ENST00000613721 USP6P35125 1406 aa15.14■□□□□ 0.01
TUBD1-216ENST00000613721 LMOD3Q0VAK6 560 aa15.14■□□□□ 0.01
TUBD1-216ENST00000613721 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
TUBD1-216ENST00000613721 ZBTB40Q9NUA8 1239 aa15.14■□□□□ 0.01
TUBD1-216ENST00000613721 NGDNQ8NEJ9 315 aaKnown RBP15.14■□□□□ 0.01
TUBD1-216ENST00000613721 NFKBIBQ15653 356 aa15.13■□□□□ 0.01
TUBD1-216ENST00000613721 SETD1BQ9UPS6 1966 aaKnown RBP15.13■□□□□ 0.01
TUBD1-216ENST00000613721 SMC5Q8IY18 1101 aa15.12■□□□□ 0.01
TUBD1-216ENST00000613721 NALCNQ8IZF0 1738 aa15.12■□□□□ 0.01
TUBD1-216ENST00000613721 BECN1Q14457 450 aa15.12■□□□□ 0.01
TUBD1-216ENST00000613721 CHD2O14647 1828 aaKnown RBP15.12■□□□□ 0.01
TUBD1-216ENST00000613721 VAMP4O75379 141 aa15.11■□□□□ 0.01
TUBD1-216ENST00000613721 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
TUBD1-216ENST00000613721 ZNF853P0CG23 659 aa15.11■□□□□ 0.01
TUBD1-216ENST00000613721 MBIPQ9NS73 344 aa15.11■□□□□ 0.01
TUBD1-216ENST00000613721 TBC1D32Q96NH3 1257 aa15.11■□□□□ 0.01
TUBD1-216ENST00000613721 RNF216Q9NWF9 866 aaPredicted RBP15.11■□□□□ 0.01
TUBD1-216ENST00000613721 OVOS2A0A0J9YW53 1432 aa15.11■□□□□ 0.01
TUBD1-216ENST00000613721 OVOS2Q6IE36 1432 aa15.11■□□□□ 0.01
TUBD1-216ENST00000613721 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
TUBD1-216ENST00000613721 ARHGAP45Q92619 1136 aa15.1■□□□□ 0.01
TUBD1-216ENST00000613721 PIK3R4Q99570 1358 aa15.1■□□□□ 0.01
TUBD1-216ENST00000613721 NPHP4O75161 1426 aaPredicted RBP15.1■□□□□ 0.01
TUBD1-216ENST00000613721 AEBP1Q8IUX7 1158 aa15.09■□□□□ 0.01
TUBD1-216ENST00000613721 TSPYL6Q8N831 410 aa15.09■□□□□ 0.01
TUBD1-216ENST00000613721 CFAP44Q96MT7 982 aa15.09■□□□□ 0.01
TUBD1-216ENST00000613721 SSH2Q76I76 1423 aa15.09■□□□□ 0.01
TUBD1-216ENST00000613721 HSP90AB2PQ58FF8 381 aa15.09■□□□□ 0.01
TUBD1-216ENST00000613721 CHMP4BQ9H444 224 aaKnown RBP15.09■□□□□ 0.01
TUBD1-216ENST00000613721 PEAK1Q9H792 1746 aa15.09■□□□□ 0.01
TUBD1-216ENST00000613721 TWISTNBQ3B726 338 aaPredicted RBP15.08■□□□□ 0.01
TUBD1-216ENST00000613721 FMN2Q9NZ56 1722 aa15.08■□□□□ 0
TUBD1-216ENST00000613721 HSPA2P54652 639 aa15.08■□□□□ 0
TUBD1-216ENST00000613721 ELL2O00472 640 aaPredicted RBP15.07■□□□□ 0
TUBD1-216ENST00000613721 C14orf37Q86TY3 774 aa15.07■□□□□ 0
TUBD1-216ENST00000613721 FAM83GA6ND36 823 aa15.07■□□□□ 0
TUBD1-216ENST00000613721 XPCQ01831 940 aaPredicted RBP15.07■□□□□ 0
TUBD1-216ENST00000613721 EIF4A2Q14240 407 aaKnown RBP15.07■□□□□ 0
TUBD1-216ENST00000613721 RGPD1P0DJD0 1748 aa15.07■□□□□ 0
TUBD1-216ENST00000613721 PIK3C2AO00443 1686 aa15.06■□□□□ 0
TUBD1-216ENST00000613721 ABCC4O15439 1325 aa15.06■□□□□ 0
TUBD1-216ENST00000613721 ZBTB7BO15156 539 aaPredicted RBP15.05■□□□□ 0
TUBD1-216ENST00000613721 NUCB1Q02818 461 aa15.05■□□□□ 0
TUBD1-216ENST00000613721 SULT6B1Q6IMI4 303 aa15.05■□□□□ -0
TUBD1-216ENST00000613721 MAP3K19Q56UN5 1328 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms