RNA–Protein interactions for RNA: ENST00000613146.4

ACACA-228, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 3,974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-228ENST00000613146 INSRP06213 1382 aa9.76□□□□□ -0.85
ACACA-228ENST00000613146 NINLQ9Y2I6 1382 aa9.76□□□□□ -0.85
ACACA-228ENST00000613146 TRIM27P14373 513 aa9.76□□□□□ -0.85
ACACA-228ENST00000613146 CHRNA2Q15822 529 aa9.76□□□□□ -0.85
ACACA-228ENST00000613146 MTHFSDQ2M296 383 aaKnown RBP9.76□□□□□ -0.85
ACACA-228ENST00000613146 CPSF1Q10570 1443 aaKnown RBP9.75□□□□□ -0.85
ACACA-228ENST00000613146 PDE4AP27815 886 aa9.75□□□□□ -0.85
ACACA-228ENST00000613146 TMEM57Q8N5G2 664 aa9.75□□□□□ -0.85
ACACA-228ENST00000613146 RGPD8O14715 1765 aaPredicted RBP9.75□□□□□ -0.85
ACACA-228ENST00000613146 ZKSCAN2Q63HK3 967 aa9.75□□□□□ -0.85
ACACA-228ENST00000613146 SLC4A10Q6U841 1118 aa9.75□□□□□ -0.85
ACACA-228ENST00000613146 DZIP1LQ8IYY4 767 aaKnown RBP9.74□□□□□ -0.85
ACACA-228ENST00000613146 RTF1Q92541 710 aaKnown RBP9.74□□□□□ -0.85
ACACA-228ENST00000613146 NBR1Q14596 966 aa9.74□□□□□ -0.85
ACACA-228ENST00000613146 TWISTNBQ3B726 338 aaPredicted RBP9.74□□□□□ -0.85
ACACA-228ENST00000613146 PNNQ9H307 717 aaKnown RBP9.73□□□□□ -0.85
ACACA-228ENST00000613146 USP6P35125 1406 aa9.73□□□□□ -0.85
ACACA-228ENST00000613146 SHPRHQ149N8 1683 aa9.73□□□□□ -0.85
ACACA-228ENST00000613146 FAM135BQ49AJ0 1406 aa9.73□□□□□ -0.85
ACACA-228ENST00000613146 USP35Q9P2H5 1018 aa9.73□□□□□ -0.85
ACACA-228ENST00000613146 ATF3P18847 181 aa9.73□□□□□ -0.85
ACACA-228ENST00000613146 EIF2S2P20042 333 aaKnown RBP9.73□□□□□ -0.85
ACACA-228ENST00000613146 KRT28Q7Z3Y7 464 aa9.72□□□□□ -0.85
ACACA-228ENST00000613146 F6X3S4 739 aa9.72□□□□□ -0.85
ACACA-228ENST00000613146 ANXA1P04083 346 aa9.72□□□□□ -0.85
ACACA-228ENST00000613146 HOXC9P31274 260 aa9.72□□□□□ -0.85
ACACA-228ENST00000613146 SIRT1Q96EB6 747 aa9.72□□□□□ -0.85
ACACA-228ENST00000613146 TSPYL4Q9UJ04 414 aa9.72□□□□□ -0.85
ACACA-228ENST00000613146 NBPF6Q5VWK0 638 aa9.72□□□□□ -0.85
ACACA-228ENST00000613146 NBPF4Q96M43 638 aa9.72□□□□□ -0.85
ACACA-228ENST00000613146 PHF23Q9BUL5 403 aaPredicted RBP9.72□□□□□ -0.85
ACACA-228ENST00000613146 CSB-PGBD3P0DP91 1061 aa9.71□□□□□ -0.85
ACACA-228ENST00000613146 HAP1P54257 671 aaPredicted RBP9.71□□□□□ -0.85
ACACA-228ENST00000613146 MPRIPQ6WCQ1 1025 aa9.71□□□□□ -0.85
ACACA-228ENST00000613146 SETD1AO15047 1707 aaKnown RBP9.71□□□□□ -0.85
ACACA-228ENST00000613146 VAMP4O75379 141 aa9.71□□□□□ -0.86
ACACA-228ENST00000613146 ATF7IPQ6VMQ6 1270 aa9.71□□□□□ -0.86
ACACA-228ENST00000613146 A0A0G2JS52 829 aa9.7□□□□□ -0.86
ACACA-228ENST00000613146 AXIN2Q9Y2T1 843 aa9.7□□□□□ -0.86
ACACA-228ENST00000613146 DLC1Q96QB1 1528 aa9.7□□□□□ -0.86
ACACA-228ENST00000613146 GNAI1P63096 354 aa9.7□□□□□ -0.86
ACACA-228ENST00000613146 CCDC27Q2M243 656 aa9.7□□□□□ -0.86
ACACA-228ENST00000613146 LGR6Q9HBX8 967 aa9.7□□□□□ -0.86
ACACA-228ENST00000613146 NLRP2Q9NX02 1062 aa9.7□□□□□ -0.86
ACACA-228ENST00000613146 PNPLA6Q8IY17 1366 aa9.7□□□□□ -0.86
ACACA-228ENST00000613146 KAT6BQ8WYB5 2073 aa9.7□□□□□ -0.86
ACACA-228ENST00000613146 LRRC7Q96NW7 1537 aa9.7□□□□□ -0.86
ACACA-228ENST00000613146 ANP32AP39687 249 aaKnown RBP9.7□□□□□ -0.86
ACACA-228ENST00000613146 GCP02774 474 aa9.69□□□□□ -0.86
ACACA-228ENST00000613146 SLC4A2P04920 1241 aa9.69□□□□□ -0.86
ACACA-228ENST00000613146 CENPQQ7L2Z9 268 aaPredicted RBP9.69□□□□□ -0.86
ACACA-228ENST00000613146 COL3A1P02461 1466 aaPredicted RBP9.69□□□□□ -0.86
ACACA-228ENST00000613146 CEP170BQ9Y4F5 1589 aaPredicted RBP9.69□□□□□ -0.86
ACACA-228ENST00000613146 MVPQ14764 893 aaKnown RBP9.69□□□□□ -0.86
ACACA-228ENST00000613146 G2E3Q7L622 706 aa9.69□□□□□ -0.86
ACACA-228ENST00000613146 NGEFQ8N5V2 710 aa9.69□□□□□ -0.86
ACACA-228ENST00000613146 LNPKQ9C0E8 428 aa9.69□□□□□ -0.86
ACACA-228ENST00000613146 PDZRN3Q9UPQ7 1066 aa9.69□□□□□ -0.86
ACACA-228ENST00000613146 KCNQ3O43525 872 aa9.68□□□□□ -0.86
ACACA-228ENST00000613146 PDE3AQ14432 1141 aa9.68□□□□□ -0.86
ACACA-228ENST00000613146 TECPR2O15040 1411 aa9.68□□□□□ -0.86
ACACA-228ENST00000613146 NPHP4O75161 1426 aaPredicted RBP9.68□□□□□ -0.86
ACACA-228ENST00000613146 PIP4K2AP48426 406 aaPredicted RBP9.68□□□□□ -0.86
ACACA-228ENST00000613146 CFAP44Q96MT7 982 aa9.68□□□□□ -0.86
ACACA-228ENST00000613146 ZNF335Q9H4Z2 1342 aaPredicted RBP9.68□□□□□ -0.86
ACACA-228ENST00000613146 PRKCSHP14314 528 aaPredicted RBP9.67□□□□□ -0.86
ACACA-228ENST00000613146 IQSEC2Q5JU85 1478 aa9.67□□□□□ -0.86
ACACA-228ENST00000613146 SEC24BO95487 1268 aa9.67□□□□□ -0.86
ACACA-228ENST00000613146 SPRYD3Q8NCJ5 442 aa9.67□□□□□ -0.86
ACACA-228ENST00000613146 CDC42BPGQ6DT37 1551 aa9.67□□□□□ -0.86
ACACA-228ENST00000613146 TMEM94Q12767 1356 aa9.67□□□□□ -0.86
ACACA-228ENST00000613146 DIP2AQ14689 1571 aa9.67□□□□□ -0.86
ACACA-228ENST00000613146 MED14O60244 1454 aa9.67□□□□□ -0.86
ACACA-228ENST00000613146 KDM4FA0A1W2PPD8 638 aa9.66□□□□□ -0.86
ACACA-228ENST00000613146 KDM2BQ8NHM5 1336 aa9.66□□□□□ -0.86
ACACA-228ENST00000613146 ARHGAP23Q9P227 1491 aa9.66□□□□□ -0.86
ACACA-228ENST00000613146 BACH2Q9BYV9 841 aa9.66□□□□□ -0.86
ACACA-228ENST00000613146 C19orf44Q9H6X5 657 aa9.66□□□□□ -0.86
ACACA-228ENST00000613146 STRN4Q9NRL3 753 aa9.66□□□□□ -0.86
ACACA-228ENST00000613146 KIF20BQ96Q89 1820 aa9.66□□□□□ -0.86
ACACA-228ENST00000613146 IL17REQ8NFR9 667 aa9.66□□□□□ -0.86
ACACA-228ENST00000613146 ZNF530Q6P9A1 599 aaPredicted RBP9.65□□□□□ -0.86
ACACA-228ENST00000613146 MRPL50Q8N5N7 158 aaKnown RBP9.65□□□□□ -0.86
ACACA-228ENST00000613146 ANKRD24Q8TF21 1146 aa9.65□□□□□ -0.86
ACACA-228ENST00000613146 TTC21AQ8NDW8 1320 aa9.65□□□□□ -0.86
ACACA-228ENST00000613146 GOLGB1Q14789 3259 aaKnown RBP9.65□□□□□ -0.86
ACACA-228ENST00000613146 IPO8O15397 1037 aaKnown RBP9.65□□□□□ -0.86
ACACA-228ENST00000613146 FLT4P35916 1363 aa9.65□□□□□ -0.86
ACACA-228ENST00000613146 ANKRD45Q5TZF3 282 aa9.65□□□□□ -0.86
ACACA-228ENST00000613146 IFT57Q9NWB7 429 aa9.65□□□□□ -0.86
ACACA-228ENST00000613146 PRAMEF22A3QJZ6 481 aa9.65□□□□□ -0.86
ACACA-228ENST00000613146 SLC39A6Q13433 755 aa9.65□□□□□ -0.86
ACACA-228ENST00000613146 ZBTB47Q9UFB7 747 aaPredicted RBP9.65□□□□□ -0.86
ACACA-228ENST00000613146 SLIT1O75093 1534 aa9.65□□□□□ -0.87
ACACA-228ENST00000613146 LMOD3Q0VAK6 560 aa9.65□□□□□ -0.87
ACACA-228ENST00000613146 GNAT3A8MTJ3 354 aa9.64□□□□□ -0.87
ACACA-228ENST00000613146 RWDD1Q9H446 243 aaPredicted RBP9.64□□□□□ -0.87
ACACA-228ENST00000613146 OVOS2A0A0J9YW53 1432 aa9.64□□□□□ -0.87
ACACA-228ENST00000613146 OVOS2Q6IE36 1432 aa9.64□□□□□ -0.87
ACACA-228ENST00000613146 AATKQ6ZMQ8 1374 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms