RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 LETM1O95202 739 aaPredicted RBP24.86■■□□□ 1.57
SMAD6-205ENST00000612349 OFD1O75665 1012 aa24.85■■□□□ 1.57
SMAD6-205ENST00000612349 TXLNAP40222 546 aa24.85■■□□□ 1.57
SMAD6-205ENST00000612349 RRS1Q15050 365 aaKnown RBP24.85■■□□□ 1.57
SMAD6-205ENST00000612349 MTMR7Q9Y216 660 aa24.85■■□□□ 1.57
SMAD6-205ENST00000612349 ANKRD1Q15327 319 aa24.85■■□□□ 1.57
SMAD6-205ENST00000612349 ADGRL1O94910 1474 aa24.85■■□□□ 1.57
SMAD6-205ENST00000612349 CT47A1Q5JQC4 288 aaPredicted RBP24.84■■□□□ 1.57
SMAD6-205ENST00000612349 ZNF396Q96N95 335 aaPredicted RBP24.84■■□□□ 1.57
SMAD6-205ENST00000612349 C1orf115Q9H7X2 142 aa24.84■■□□□ 1.57
SMAD6-205ENST00000612349 KINO60870 393 aaKnown RBP24.84■■□□□ 1.57
SMAD6-205ENST00000612349 EPS15P42566 896 aa24.83■■□□□ 1.57
SMAD6-205ENST00000612349 RRP12Q5JTH9 1297 aaKnown RBP24.83■■□□□ 1.57
SMAD6-205ENST00000612349 CNKSR2Q8WXI2 1034 aa24.83■■□□□ 1.57
SMAD6-205ENST00000612349 BCAR3O75815 825 aa24.83■■□□□ 1.57
SMAD6-205ENST00000612349 BTBD11A6QL63 1104 aa24.82■■□□□ 1.56
SMAD6-205ENST00000612349 JMYQ8N9B5 988 aa24.82■■□□□ 1.56
SMAD6-205ENST00000612349 NFE2L2Q16236 605 aa24.82■■□□□ 1.56
SMAD6-205ENST00000612349 CYP46A1Q9Y6A2 500 aa24.82■■□□□ 1.56
SMAD6-205ENST00000612349 URB2Q14146 1524 aaKnown RBP24.82■■□□□ 1.56
SMAD6-205ENST00000612349 CEP126Q9P2H0 1117 aa24.82■■□□□ 1.56
SMAD6-205ENST00000612349 MVPQ14764 893 aaKnown RBP24.82■■□□□ 1.56
SMAD6-205ENST00000612349 TRIM22Q8IYM9 498 aa24.81■■□□□ 1.56
SMAD6-205ENST00000612349 MYL6BP14649 208 aa24.8■■□□□ 1.56
SMAD6-205ENST00000612349 RPAP2Q8IXW5 612 aaPredicted RBP24.8■■□□□ 1.56
SMAD6-205ENST00000612349 CDK5RAP3Q96JB5 506 aa24.8■■□□□ 1.56
SMAD6-205ENST00000612349 ODF2Q5BJF6 829 aa24.8■■□□□ 1.56
SMAD6-205ENST00000612349 WAPLQ7Z5K2 1190 aa24.8■■□□□ 1.56
SMAD6-205ENST00000612349 NSD3Q9BZ95 1437 aa24.79■■□□□ 1.56
SMAD6-205ENST00000612349 PIP4K2AP48426 406 aaPredicted RBP24.79■■□□□ 1.56
SMAD6-205ENST00000612349 NAP1L1P55209 391 aaKnown RBP24.79■■□□□ 1.56
SMAD6-205ENST00000612349 GNAT3A8MTJ3 354 aa24.78■■□□□ 1.56
SMAD6-205ENST00000612349 ATP2B1P20020 1258 aa24.78■■□□□ 1.56
SMAD6-205ENST00000612349 XPCQ01831 940 aaPredicted RBP24.78■■□□□ 1.56
SMAD6-205ENST00000612349 SIL1Q9H173 461 aa24.78■■□□□ 1.56
SMAD6-205ENST00000612349 WDR97A6NE52 1622 aa24.78■■□□□ 1.56
SMAD6-205ENST00000612349 KIF14Q15058 1648 aa24.77■■□□□ 1.56
SMAD6-205ENST00000612349 SRGAP3O43295 1099 aa24.77■■□□□ 1.56
SMAD6-205ENST00000612349 STK38Q15208 465 aa24.77■■□□□ 1.56
SMAD6-205ENST00000612349 CCAR1Q8IX12 1150 aaKnown RBP24.77■■□□□ 1.56
SMAD6-205ENST00000612349 STARD3NLO95772 234 aa24.77■■□□□ 1.56
SMAD6-205ENST00000612349 ZNF608Q9ULD9 1512 aaPredicted RBP24.77■■□□□ 1.56
SMAD6-205ENST00000612349 AKNAQ7Z591 1439 aa24.77■■□□□ 1.56
SMAD6-205ENST00000612349 CTNNA3Q9UI47 895 aa24.77■■□□□ 1.56
SMAD6-205ENST00000612349 AEBP1Q8IUX7 1158 aa24.76■■□□□ 1.55
SMAD6-205ENST00000612349 IFT57Q9NWB7 429 aa24.76■■□□□ 1.55
SMAD6-205ENST00000612349 MAP3K1Q13233 1512 aa24.76■■□□□ 1.55
SMAD6-205ENST00000612349 PTPN23Q9H3S7 1636 aa24.76■■□□□ 1.55
SMAD6-205ENST00000612349 MRE11P49959 708 aa24.76■■□□□ 1.55
SMAD6-205ENST00000612349 CDR1P51861 262 aa24.76■■□□□ 1.55
SMAD6-205ENST00000612349 ZC3H6P61129 1189 aaKnown RBP24.76■■□□□ 1.55
SMAD6-205ENST00000612349 NCOA1Q15788 1441 aa24.75■■□□□ 1.55
SMAD6-205ENST00000612349 CCDC184Q52MB2 194 aa24.75■■□□□ 1.55
SMAD6-205ENST00000612349 FILIP1LQ4L180 1135 aa24.75■■□□□ 1.55
SMAD6-205ENST00000612349 MNS1Q8NEH6 495 aa24.75■■□□□ 1.55
SMAD6-205ENST00000612349 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.75■■□□□ 1.55
SMAD6-205ENST00000612349 TMPOP42166 694 aaKnown RBP24.74■■□□□ 1.55
SMAD6-205ENST00000612349 IDI1Q13907 227 aa24.74■■□□□ 1.55
SMAD6-205ENST00000612349 CCDC173Q0VFZ6 552 aa24.74■■□□□ 1.55
SMAD6-205ENST00000612349 NFKBIBQ15653 356 aa24.74■■□□□ 1.55
SMAD6-205ENST00000612349 AACSQ86V21 672 aa24.73■■□□□ 1.55
SMAD6-205ENST00000612349 ARGLU1Q9NWB6 273 aaPredicted RBP24.73■■□□□ 1.55
SMAD6-205ENST00000612349 FBXO31Q5XUX0 539 aaPredicted RBP24.73■■□□□ 1.55
SMAD6-205ENST00000612349 ACBD3Q9H3P7 528 aa24.72■■□□□ 1.55
SMAD6-205ENST00000612349 CHD1LQ86WJ1 897 aa24.72■■□□□ 1.55
SMAD6-205ENST00000612349 PEG3Q9GZU2 1588 aa24.72■■□□□ 1.55
SMAD6-205ENST00000612349 AMOTQ4VCS5 1084 aa24.71■■□□□ 1.55
SMAD6-205ENST00000612349 CCDC69A6NI79 296 aa24.71■■□□□ 1.55
SMAD6-205ENST00000612349 KRT32Q14532 448 aa24.71■■□□□ 1.55
SMAD6-205ENST00000612349 IGHMBP2P38935 993 aaKnown RBP24.71■■□□□ 1.55
SMAD6-205ENST00000612349 SETQ01105 290 aaPredicted RBP24.71■■□□□ 1.55
SMAD6-205ENST00000612349 CCDC39Q9UFE4 941 aa24.71■■□□□ 1.55
SMAD6-205ENST00000612349 NASPP49321 788 aaPredicted RBP24.7■■□□□ 1.55
SMAD6-205ENST00000612349 MAGEC2Q9UBF1 373 aaPredicted RBP24.7■■□□□ 1.55
SMAD6-205ENST00000612349 KRT18P05783 430 aaKnown RBP24.7■■□□□ 1.54
SMAD6-205ENST00000612349 WWC2Q6AWC2 1192 aa24.7■■□□□ 1.54
SMAD6-205ENST00000612349 PDILTQ8N807 584 aa24.7■■□□□ 1.54
SMAD6-205ENST00000612349 ADGRF5Q8IZF2 1346 aa24.7■■□□□ 1.54
SMAD6-205ENST00000612349 CDKL5O76039 1030 aa24.7■■□□□ 1.54
SMAD6-205ENST00000612349 ATP2B2Q01814 1243 aa24.7■■□□□ 1.54
SMAD6-205ENST00000612349 RUFY1Q96T51 708 aa24.7■■□□□ 1.54
SMAD6-205ENST00000612349 FKBP4Q02790 459 aaKnown RBP eCLIP24.69■■□□□ 1.54
SMAD6-205ENST00000612349 SOGA3Q5TF21 947 aa24.69■■□□□ 1.54
SMAD6-205ENST00000612349 BLOC1S2Q6QNY1 142 aa24.69■■□□□ 1.54
SMAD6-205ENST00000612349 PPP1R1BQ9UD71 204 aaPredicted RBP24.69■■□□□ 1.54
SMAD6-205ENST00000612349 PPP6R1Q9UPN7 881 aa24.69■■□□□ 1.54
SMAD6-205ENST00000612349 WDR33Q9C0J8 1336 aaKnown RBP24.69■■□□□ 1.54
SMAD6-205ENST00000612349 PDIA4P13667 645 aaKnown RBP24.69■■□□□ 1.54
SMAD6-205ENST00000612349 TEX35Q5T0J7 233 aa24.69■■□□□ 1.54
SMAD6-205ENST00000612349 TRIM5Q9C035 493 aa24.69■■□□□ 1.54
SMAD6-205ENST00000612349 ZNF652Q9Y2D9 606 aa24.69■■□□□ 1.54
SMAD6-205ENST00000612349 ABCC11Q96J66 1382 aa24.68■■□□□ 1.54
SMAD6-205ENST00000612349 TRAK2O60296 914 aa24.68■■□□□ 1.54
SMAD6-205ENST00000612349 KDM4AO75164 1064 aa24.68■■□□□ 1.54
SMAD6-205ENST00000612349 RDXP35241 583 aaKnown RBP24.68■■□□□ 1.54
SMAD6-205ENST00000612349 SMARCE1Q969G3 411 aa24.68■■□□□ 1.54
SMAD6-205ENST00000612349 FAM43AQ8N2R8 423 aa24.68■■□□□ 1.54
SMAD6-205ENST00000612349 FIBPO43427 364 aa24.67■■□□□ 1.54
SMAD6-205ENST00000612349 DHX8Q14562 1220 aaKnown RBP24.67■■□□□ 1.54
SMAD6-205ENST00000612349 ZSCAN31Q96LW9 406 aaPredicted RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms