RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 LRRIQ1Q96JM4 1722 aa7.83□□□□□ -1.16
SNX13-213ENST00000611725 GNAI2P04899 355 aa7.83□□□□□ -1.16
SNX13-213ENST00000611725 IL13P35225 146 aa7.83□□□□□ -1.16
SNX13-213ENST00000611725 ARHGAP31Q2M1Z3 1444 aa7.83□□□□□ -1.16
SNX13-213ENST00000611725 ZFYVE9O95405 1425 aa7.83□□□□□ -1.16
SNX13-213ENST00000611725 SURF6O75683 361 aaKnown RBP7.83□□□□□ -1.16
SNX13-213ENST00000611725 MRPL50Q8N5N7 158 aaKnown RBP7.83□□□□□ -1.16
SNX13-213ENST00000611725 CIZ1Q9ULV3 898 aaPredicted RBP7.83□□□□□ -1.16
SNX13-213ENST00000611725 ZMYM3Q14202 1370 aa7.83□□□□□ -1.16
SNX13-213ENST00000611725 TRAK2O60296 914 aa7.83□□□□□ -1.16
SNX13-213ENST00000611725 SRCIN1Q9C0H9 1055 aa7.83□□□□□ -1.16
SNX13-213ENST00000611725 PPIP5K1Q6PFW1 1433 aa7.82□□□□□ -1.16
SNX13-213ENST00000611725 ESCO1Q5FWF5 840 aa7.82□□□□□ -1.16
SNX13-213ENST00000611725 C9orf78Q9NZ63 289 aaPredicted RBP7.82□□□□□ -1.16
SNX13-213ENST00000611725 NUCB2P80303 420 aa7.82□□□□□ -1.16
SNX13-213ENST00000611725 NUCB1Q02818 461 aa7.82□□□□□ -1.16
SNX13-213ENST00000611725 KRT24Q2M2I5 525 aa7.82□□□□□ -1.16
SNX13-213ENST00000611725 IL27Q8NEV9 243 aa7.82□□□□□ -1.16
SNX13-213ENST00000611725 EXOC6BQ9Y2D4 811 aa7.82□□□□□ -1.16
SNX13-213ENST00000611725 F6X3S4 739 aa7.82□□□□□ -1.16
SNX13-213ENST00000611725 HSP90AB4PQ58FF6 505 aa7.82□□□□□ -1.16
SNX13-213ENST00000611725 ZNF530Q6P9A1 599 aaPredicted RBP7.82□□□□□ -1.16
SNX13-213ENST00000611725 ANKLE2Q86XL3 938 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 SIRT1Q96EB6 747 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 UNC13BO14795 1591 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 PLEKHF1Q96S99 279 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 PHF8Q9UPP1 1060 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 TBX22Q9Y458 520 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 NLRP2Q9NX02 1062 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 ZBTB7BO15156 539 aaPredicted RBP7.81□□□□□ -1.16
SNX13-213ENST00000611725 FGD1P98174 961 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 TPRNQ4KMQ1 711 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 CDC42BPAQ5VT25 1732 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 MAP3K19Q56UN5 1328 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 NEK4P51957 841 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 RAPGEF4Q8WZA2 1011 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 IQGAP3Q86VI3 1631 aa7.81□□□□□ -1.16
SNX13-213ENST00000611725 PLEKHG3A1L390 1219 aa7.8□□□□□ -1.16
SNX13-213ENST00000611725 FLIIQ13045 1269 aa7.8□□□□□ -1.16
SNX13-213ENST00000611725 K7ELQ4 463 aaPredicted RBP7.8□□□□□ -1.16
SNX13-213ENST00000611725 NEXNQ0ZGT2 675 aa7.8□□□□□ -1.16
SNX13-213ENST00000611725 PLEKHO1Q53GL0 409 aaPredicted RBP7.8□□□□□ -1.16
SNX13-213ENST00000611725 DIAPH3Q9NSV4 1193 aa7.8□□□□□ -1.16
SNX13-213ENST00000611725 EFCAB6Q5THR3 1501 aa7.8□□□□□ -1.16
SNX13-213ENST00000611725 PTMAP06454 111 aaKnown RBP7.8□□□□□ -1.16
SNX13-213ENST00000611725 ANKRD44Q8N8A2 993 aa7.8□□□□□ -1.16
SNX13-213ENST00000611725 MEIS3Q99687 375 aa7.8□□□□□ -1.16
SNX13-213ENST00000611725 TTC21AQ8NDW8 1320 aa7.8□□□□□ -1.16
SNX13-213ENST00000611725 GNAT3A8MTJ3 354 aa7.8□□□□□ -1.16
SNX13-213ENST00000611725 TBC1D9Q6ZT07 1266 aa7.8□□□□□ -1.16
SNX13-213ENST00000611725 GPATCH3Q96I76 525 aa7.8□□□□□ -1.16
SNX13-213ENST00000611725 CHL1O00533 1208 aa7.79□□□□□ -1.16
SNX13-213ENST00000611725 LRRCC1Q9C099 1032 aa7.79□□□□□ -1.16
SNX13-213ENST00000611725 DCTPP1Q9H773 170 aa7.79□□□□□ -1.16
SNX13-213ENST00000611725 MRE11P49959 708 aa7.79□□□□□ -1.16
SNX13-213ENST00000611725 CLASRPQ8N2M8 674 aaKnown RBP7.79□□□□□ -1.16
SNX13-213ENST00000611725 A0A0G2JS52 829 aa7.79□□□□□ -1.16
SNX13-213ENST00000611725 FOXD4L5Q5VV16 416 aaPredicted RBP7.79□□□□□ -1.16
SNX13-213ENST00000611725 FOXD4L4Q8WXT5 416 aaPredicted RBP7.79□□□□□ -1.16
SNX13-213ENST00000611725 TMEM2Q9UHN6 1383 aa7.79□□□□□ -1.16
SNX13-213ENST00000611725 ERC2O15083 957 aa7.79□□□□□ -1.16
SNX13-213ENST00000611725 PROSER2Q86WR7 435 aaPredicted RBP7.79□□□□□ -1.16
SNX13-213ENST00000611725 EDC4Q6P2E9 1401 aaKnown RBP7.79□□□□□ -1.16
SNX13-213ENST00000611725 PTPRCP08575 1304 aa7.79□□□□□ -1.16
SNX13-213ENST00000611725 DDX58O95786 925 aaKnown RBP7.79□□□□□ -1.16
SNX13-213ENST00000611725 FOXO3O43524 673 aa7.78□□□□□ -1.16
SNX13-213ENST00000611725 TAF7Q15545 349 aaPredicted RBP7.78□□□□□ -1.16
SNX13-213ENST00000611725 IL1RAPL2Q9NP60 686 aa7.78□□□□□ -1.16
SNX13-213ENST00000611725 ISY1Q9ULR0 285 aaKnown RBP7.78□□□□□ -1.16
SNX13-213ENST00000611725 MTHFSDQ2M296 383 aaKnown RBP7.78□□□□□ -1.16
SNX13-213ENST00000611725 METP08581 1390 aa7.78□□□□□ -1.16
SNX13-213ENST00000611725 FLT4P35916 1363 aa7.78□□□□□ -1.16
SNX13-213ENST00000611725 SRGAP3O43295 1099 aa7.78□□□□□ -1.16
SNX13-213ENST00000611725 IFIT2P09913 472 aaKnown RBP7.78□□□□□ -1.16
SNX13-213ENST00000611725 EYA1Q99502 592 aa7.78□□□□□ -1.16
SNX13-213ENST00000611725 KCNA6P17658 529 aa7.78□□□□□ -1.16
SNX13-213ENST00000611725 NAP1L5Q96NT1 182 aaPredicted RBP7.78□□□□□ -1.16
SNX13-213ENST00000611725 SYNMO15061 1565 aa7.78□□□□□ -1.16
SNX13-213ENST00000611725 GOLGA6L4A6NEF3 574 aa7.78□□□□□ -1.16
SNX13-213ENST00000611725 SMARCA5O60264 1052 aaPredicted RBP7.78□□□□□ -1.16
SNX13-213ENST00000611725 ZKSCAN1P17029 563 aaPredicted RBP7.78□□□□□ -1.16
SNX13-213ENST00000611725 TTC5Q8N0Z6 440 aa7.78□□□□□ -1.16
SNX13-213ENST00000611725 LTKP29376 864 aa7.78□□□□□ -1.16
SNX13-213ENST00000611725 KCNH5Q8NCM2 988 aa7.78□□□□□ -1.16
SNX13-213ENST00000611725 ABCC3O15438 1527 aa7.77□□□□□ -1.17
SNX13-213ENST00000611725 MX1P20591 662 aa7.77□□□□□ -1.17
SNX13-213ENST00000611725 RUFY2Q8WXA3 655 aa7.77□□□□□ -1.17
SNX13-213ENST00000611725 RBM33Q96EV2 1170 aaKnown RBP7.77□□□□□ -1.17
SNX13-213ENST00000611725 ZNF330Q9Y3S2 320 aaPredicted RBP7.77□□□□□ -1.17
SNX13-213ENST00000611725 SYAP1Q96A49 352 aaPredicted RBP7.77□□□□□ -1.17
SNX13-213ENST00000611725 PLCB2Q00722 1185 aa7.77□□□□□ -1.17
SNX13-213ENST00000611725 G3BP1Q13283 466 aaKnown RBP eCLIP7.77□□□□□ -1.17
SNX13-213ENST00000611725 USHBP1Q8N6Y0 703 aa7.77□□□□□ -1.17
SNX13-213ENST00000611725 CLASP1Q7Z460 1538 aa7.77□□□□□ -1.17
SNX13-213ENST00000611725 TRPM1Q7Z4N2 1603 aa7.77□□□□□ -1.17
SNX13-213ENST00000611725 MYO5CQ9NQX4 1742 aa7.76□□□□□ -1.17
SNX13-213ENST00000611725 MCM2P49736 904 aa7.76□□□□□ -1.17
SNX13-213ENST00000611725 XPCQ01831 940 aaPredicted RBP7.76□□□□□ -1.17
SNX13-213ENST00000611725 AIMP1Q12904 312 aaKnown RBP7.76□□□□□ -1.17
SNX13-213ENST00000611725 LMTK2Q8IWU2 1503 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms