RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 ZNF428Q96B54 188 aa15.26■□□□□ 0.03
SRRT-213ENST00000611405 LMOD3Q0VAK6 560 aa15.25■□□□□ 0.03
SRRT-213ENST00000611405 C8orf34Q49A92 452 aa15.25■□□□□ 0.03
SRRT-213ENST00000611405 RWDD1Q9H446 243 aaPredicted RBP15.25■□□□□ 0.03
SRRT-213ENST00000611405 PCDHB15Q9Y5E8 787 aa15.25■□□□□ 0.03
SRRT-213ENST00000611405 NRKQ7Z2Y5 1582 aa15.25■□□□□ 0.03
SRRT-213ENST00000611405 USP6P35125 1406 aa15.25■□□□□ 0.03
SRRT-213ENST00000611405 IPO8O15397 1037 aaKnown RBP15.24■□□□□ 0.03
SRRT-213ENST00000611405 ATF7IPQ6VMQ6 1270 aa15.24■□□□□ 0.03
SRRT-213ENST00000611405 DDRGK1Q96HY6 314 aa15.24■□□□□ 0.03
SRRT-213ENST00000611405 KIF16BQ96L93 1317 aa15.24■□□□□ 0.03
SRRT-213ENST00000611405 OVOS2A0A0J9YW53 1432 aa15.23■□□□□ 0.03
SRRT-213ENST00000611405 OVOS2Q6IE36 1432 aa15.23■□□□□ 0.03
SRRT-213ENST00000611405 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
SRRT-213ENST00000611405 TRIM27P14373 513 aa15.23■□□□□ 0.03
SRRT-213ENST00000611405 GNAI1P63096 354 aa15.23■□□□□ 0.03
SRRT-213ENST00000611405 NOB1Q9ULX3 412 aaKnown RBP15.23■□□□□ 0.03
SRRT-213ENST00000611405 DDX19BQ9UMR2 479 aa15.22■□□□□ 0.03
SRRT-213ENST00000611405 BRPF1P55201 1214 aaPredicted RBP15.22■□□□□ 0.03
SRRT-213ENST00000611405 SSH2Q76I76 1423 aa15.21■□□□□ 0.03
SRRT-213ENST00000611405 TTC21AQ8NDW8 1320 aa15.21■□□□□ 0.03
SRRT-213ENST00000611405 USP31Q70CQ4 1352 aa15.21■□□□□ 0.03
SRRT-213ENST00000611405 NUTM2FA1L443 756 aa15.21■□□□□ 0.03
SRRT-213ENST00000611405 ZNF853P0CG23 659 aa15.2■□□□□ 0.02
SRRT-213ENST00000611405 LAS1LQ9Y4W2 734 aaKnown RBP15.2■□□□□ 0.02
SRRT-213ENST00000611405 EIF4A2Q14240 407 aaKnown RBP15.2■□□□□ 0.02
SRRT-213ENST00000611405 PIK3R4Q99570 1358 aa15.19■□□□□ 0.02
SRRT-213ENST00000611405 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
SRRT-213ENST00000611405 ITPRIPQ8IWB1 547 aa15.18■□□□□ 0.02
SRRT-213ENST00000611405 ARXQ96QS3 562 aa15.18■□□□□ 0.02
SRRT-213ENST00000611405 NALCNQ8IZF0 1738 aa15.18■□□□□ 0.02
SRRT-213ENST00000611405 THUMPD2Q9BTF0 503 aaKnown RBP15.18■□□□□ 0.02
SRRT-213ENST00000611405 XRN1Q8IZH2 1706 aaKnown RBP15.17■□□□□ 0.02
SRRT-213ENST00000611405 VAMP4O75379 141 aa15.17■□□□□ 0.02
SRRT-213ENST00000611405 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
SRRT-213ENST00000611405 HDAC1Q13547 482 aaPredicted RBP15.17■□□□□ 0.02
SRRT-213ENST00000611405 PDZRN3Q9UPQ7 1066 aa15.17■□□□□ 0.02
SRRT-213ENST00000611405 TMEM57Q8N5G2 664 aa15.16■□□□□ 0.02
SRRT-213ENST00000611405 MBIPQ9NS73 344 aa15.16■□□□□ 0.02
SRRT-213ENST00000611405 ANKARQ7Z5J8 1434 aa15.16■□□□□ 0.02
SRRT-213ENST00000611405 SULT6B1Q6IMI4 303 aa15.16■□□□□ 0.02
SRRT-213ENST00000611405 NGDNQ8NEJ9 315 aaKnown RBP15.16■□□□□ 0.02
SRRT-213ENST00000611405 ARHGAP45Q92619 1136 aa15.16■□□□□ 0.02
SRRT-213ENST00000611405 MRPL50Q8N5N7 158 aaKnown RBP15.15■□□□□ 0.02
SRRT-213ENST00000611405 CEP170BQ9Y4F5 1589 aaPredicted RBP15.15■□□□□ 0.02
SRRT-213ENST00000611405 ZBTB40Q9NUA8 1239 aa15.14■□□□□ 0.01
SRRT-213ENST00000611405 CHMP4BQ9H444 224 aaKnown RBP15.14■□□□□ 0.01
SRRT-213ENST00000611405 RIMS1Q86UR5 1692 aaKnown RBP15.14■□□□□ 0.01
SRRT-213ENST00000611405 HSP90AB2PQ58FF8 381 aa15.13■□□□□ 0.01
SRRT-213ENST00000611405 AEBP1Q8IUX7 1158 aa15.13■□□□□ 0.01
SRRT-213ENST00000611405 PEAK1Q9H792 1746 aa15.13■□□□□ 0.01
SRRT-213ENST00000611405 DLG5Q8TDM6 1919 aa15.13■□□□□ 0.01
SRRT-213ENST00000611405 ARHGEF10O15013 1369 aa15.13■□□□□ 0.01
SRRT-213ENST00000611405 KCNA6P17658 529 aa15.13■□□□□ 0.01
SRRT-213ENST00000611405 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
SRRT-213ENST00000611405 TSPYL6Q8N831 410 aa15.13■□□□□ 0.01
SRRT-213ENST00000611405 SBNO1A3KN83 1393 aa15.13■□□□□ 0.01
SRRT-213ENST00000611405 FAM83GA6ND36 823 aa15.12■□□□□ 0.01
SRRT-213ENST00000611405 RGPD1P0DJD0 1748 aa15.12■□□□□ 0.01
SRRT-213ENST00000611405 MAP3K19Q56UN5 1328 aa15.12■□□□□ 0.01
SRRT-213ENST00000611405 VIRMAQ69YN4 1812 aaKnown RBP15.11■□□□□ 0.01
SRRT-213ENST00000611405 FLT4P35916 1363 aa15.11■□□□□ 0.01
SRRT-213ENST00000611405 HAP1P54257 671 aaPredicted RBP15.1■□□□□ 0.01
SRRT-213ENST00000611405 ANKLE2Q86XL3 938 aa15.1■□□□□ 0.01
SRRT-213ENST00000611405 SMC5Q8IY18 1101 aa15.1■□□□□ 0.01
SRRT-213ENST00000611405 C8orf58Q8NAV2 365 aa15.1■□□□□ 0.01
SRRT-213ENST00000611405 DCTN1Q14203 1278 aa15.1■□□□□ 0.01
SRRT-213ENST00000611405 SOX12O15370 315 aa15.09■□□□□ 0.01
SRRT-213ENST00000611405 API5Q9BZZ5 524 aaKnown RBP15.09■□□□□ 0.01
SRRT-213ENST00000611405 FMN2Q9NZ56 1722 aa15.08■□□□□ 0.01
SRRT-213ENST00000611405 RGPD8O14715 1765 aaPredicted RBP15.08■□□□□ 0.01
SRRT-213ENST00000611405 ELL2O00472 640 aaPredicted RBP15.08■□□□□ 0
SRRT-213ENST00000611405 CHL1O00533 1208 aa15.08■□□□□ 0
SRRT-213ENST00000611405 NBR1Q14596 966 aa15.08■□□□□ 0
SRRT-213ENST00000611405 ABCC4O15439 1325 aa15.08■□□□□ 0
SRRT-213ENST00000611405 AMPHP49418 695 aa15.08■□□□□ 0
SRRT-213ENST00000611405 KIF24Q5T7B8 1368 aa15.08■□□□□ 0
SRRT-213ENST00000611405 PIK3C2AO00443 1686 aa15.07■□□□□ 0
SRRT-213ENST00000611405 ZBTB7BO15156 539 aaPredicted RBP15.07■□□□□ 0
SRRT-213ENST00000611405 NLRP6P59044 892 aa15.07■□□□□ 0
SRRT-213ENST00000611405 USP19O94966 1318 aa15.07■□□□□ 0
SRRT-213ENST00000611405 KIAA0232Q92628 1395 aa15.06■□□□□ 0
SRRT-213ENST00000611405 KDRP35968 1356 aa15.06■□□□□ 0
SRRT-213ENST00000611405 IGSF1Q8N6C5 1336 aa15.05■□□□□ 0
SRRT-213ENST00000611405 MCM10Q7L590 875 aa15.05■□□□□ 0
SRRT-213ENST00000611405 ZNF142P52746 1687 aaPredicted RBP15.05■□□□□ -0
SRRT-213ENST00000611405 RTL5Q5HYW3 569 aaPredicted RBP15.05■□□□□ -0
SRRT-213ENST00000611405 SEC24BO95487 1268 aa15.04■□□□□ -0
SRRT-213ENST00000611405 UPF2Q9HAU5 1272 aaKnown RBP15.04■□□□□ -0
SRRT-213ENST00000611405 USP54Q70EL1 1684 aa15.04■□□□□ -0
SRRT-213ENST00000611405 CRB1P82279 1406 aa15.04■□□□□ -0
SRRT-213ENST00000611405 GAS2L2Q8NHY3 880 aa15.04■□□□□ -0
SRRT-213ENST00000611405 EYA1Q99502 592 aa15.04■□□□□ -0
SRRT-213ENST00000611405 EIF5BO60841 1220 aaKnown RBP15.03■□□□□ -0
SRRT-213ENST00000611405 NUCB1Q02818 461 aa15.03■□□□□ -0
SRRT-213ENST00000611405 CHD2O14647 1828 aaKnown RBP15.03■□□□□ -0
SRRT-213ENST00000611405 MTHFSDQ2M296 383 aaKnown RBP15.03■□□□□ -0
SRRT-213ENST00000611405 RTF1Q92541 710 aaKnown RBP15.03■□□□□ -0
SRRT-213ENST00000611405 PHF8Q9UPP1 1060 aa15.03■□□□□ -0
SRRT-213ENST00000611405 ABTB2Q8N961 1025 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms