RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 LTV1Q96GA3 475 aaPredicted RBP11.56□□□□□ -0.56
ZNF248-208ENST00000611278 ACEP12821 1306 aa11.56□□□□□ -0.56
ZNF248-208ENST00000611278 TATP17735 454 aaPredicted RBP11.56□□□□□ -0.56
ZNF248-208ENST00000611278 CRYBG1Q9Y4K1 1723 aa11.55□□□□□ -0.56
ZNF248-208ENST00000611278 CABP2Q9NPB3 220 aa11.55□□□□□ -0.56
ZNF248-208ENST00000611278 TRIM37O94972 964 aa11.54□□□□□ -0.56
ZNF248-208ENST00000611278 RREB1Q92766 1687 aa11.54□□□□□ -0.56
ZNF248-208ENST00000611278 ADGRB1O14514 1584 aa11.54□□□□□ -0.56
ZNF248-208ENST00000611278 CABP1Q9NZU7 370 aa11.53□□□□□ -0.56
ZNF248-208ENST00000611278 KIAA0232Q92628 1395 aa11.53□□□□□ -0.56
ZNF248-208ENST00000611278 SSH2Q76I76 1423 aa11.52□□□□□ -0.56
ZNF248-208ENST00000611278 KTN1Q86UP2 1357 aaKnown RBP11.52□□□□□ -0.56
ZNF248-208ENST00000611278 CPDO75976 1380 aa11.52□□□□□ -0.57
ZNF248-208ENST00000611278 PRR36Q9H6K5 1346 aa11.52□□□□□ -0.57
ZNF248-208ENST00000611278 PHRF1Q9P1Y6 1649 aaKnown RBP11.52□□□□□ -0.57
ZNF248-208ENST00000611278 KCNQ2O43526 872 aa11.52□□□□□ -0.57
ZNF248-208ENST00000611278 GCP02774 474 aa11.52□□□□□ -0.57
ZNF248-208ENST00000611278 TMX4Q9H1E5 349 aaPredicted RBP11.52□□□□□ -0.57
ZNF248-208ENST00000611278 TIMELESSQ9UNS1 1208 aa11.51□□□□□ -0.57
ZNF248-208ENST00000611278 CFAP53Q96M91 514 aa11.51□□□□□ -0.57
ZNF248-208ENST00000611278 RGPD3A6NKT7 1758 aaPredicted RBP11.51□□□□□ -0.57
ZNF248-208ENST00000611278 RGPD4Q7Z3J3 1758 aa11.51□□□□□ -0.57
ZNF248-208ENST00000611278 FLAD1Q8NFF5 587 aa11.5□□□□□ -0.57
ZNF248-208ENST00000611278 SMARCC1Q92922 1105 aaPredicted RBP11.5□□□□□ -0.57
ZNF248-208ENST00000611278 CCDC7Q96M83 1385 aa11.5□□□□□ -0.57
ZNF248-208ENST00000611278 GPR162Q16538 588 aa11.5□□□□□ -0.57
ZNF248-208ENST00000611278 L3MBTL2Q969R5 705 aa11.5□□□□□ -0.57
ZNF248-208ENST00000611278 NUP188Q5SRE5 1749 aa11.5□□□□□ -0.57
ZNF248-208ENST00000611278 POLR3AO14802 1390 aaPredicted RBP11.5□□□□□ -0.57
ZNF248-208ENST00000611278 PLEKHG3A1L390 1219 aa11.49□□□□□ -0.57
ZNF248-208ENST00000611278 FAM182BQ5T319 152 aa11.49□□□□□ -0.57
ZNF248-208ENST00000611278 KNSTRNQ9Y448 316 aa11.49□□□□□ -0.57
ZNF248-208ENST00000611278 HSP90AB1P08238 724 aaKnown RBP11.49□□□□□ -0.57
ZNF248-208ENST00000611278 DDX54Q8TDD1 881 aaKnown RBP11.49□□□□□ -0.57
ZNF248-208ENST00000611278 SPG7Q9UQ90 795 aa11.49□□□□□ -0.57
ZNF248-208ENST00000611278 OVOS2A0A0G2JMS6 1433 aa11.48□□□□□ -0.57
ZNF248-208ENST00000611278 OVOS2A0A0J9YW53 1432 aa11.48□□□□□ -0.57
ZNF248-208ENST00000611278 OVOS2Q6IE36 1432 aa11.48□□□□□ -0.57
ZNF248-208ENST00000611278 IL2RBP14784 551 aa11.48□□□□□ -0.57
ZNF248-208ENST00000611278 C1orf141Q5JVX7 400 aa11.48□□□□□ -0.57
ZNF248-208ENST00000611278 PLSCR1O15162 318 aa11.48□□□□□ -0.57
ZNF248-208ENST00000611278 EIF4G2P78344 907 aaKnown RBP eCLIP11.48□□□□□ -0.57
ZNF248-208ENST00000611278 PARP4Q9UKK3 1724 aaKnown RBP11.48□□□□□ -0.57
ZNF248-208ENST00000611278 USP19O94966 1318 aa11.47□□□□□ -0.57
ZNF248-208ENST00000611278 NUDCQ9Y266 331 aa11.46□□□□□ -0.57
ZNF248-208ENST00000611278 NRKQ7Z2Y5 1582 aa11.46□□□□□ -0.57
ZNF248-208ENST00000611278 PPIP5K1Q6PFW1 1433 aa11.46□□□□□ -0.58
ZNF248-208ENST00000611278 ARHGEF28Q8N1W1 1705 aaKnown RBP11.46□□□□□ -0.58
ZNF248-208ENST00000611278 ARXQ96QS3 562 aa11.46□□□□□ -0.58
ZNF248-208ENST00000611278 CRB1P82279 1406 aa11.45□□□□□ -0.58
ZNF248-208ENST00000611278 ANP32EQ9BTT0 268 aa11.45□□□□□ -0.58
ZNF248-208ENST00000611278 TFCP2L1Q9NZI6 479 aa11.45□□□□□ -0.58
ZNF248-208ENST00000611278 TOPAZ1Q8N9V7 1692 aa11.45□□□□□ -0.58
ZNF248-208ENST00000611278 LMO7Q8WWI1 1683 aa11.45□□□□□ -0.58
ZNF248-208ENST00000611278 AK7Q96M32 723 aa11.45□□□□□ -0.58
ZNF248-208ENST00000611278 C16orf71Q8IYS4 520 aaPredicted RBP11.44□□□□□ -0.58
ZNF248-208ENST00000611278 CGNL1Q0VF96 1302 aa11.44□□□□□ -0.58
ZNF248-208ENST00000611278 BCL9O00512 1426 aa11.44□□□□□ -0.58
ZNF248-208ENST00000611278 LARP1Q6PKG0 1096 aaKnown RBP11.44□□□□□ -0.58
ZNF248-208ENST00000611278 KIAA1210Q9ULL0 1709 aa11.44□□□□□ -0.58
ZNF248-208ENST00000611278 CAMTA1Q9Y6Y1 1673 aa11.44□□□□□ -0.58
ZNF248-208ENST00000611278 ERICH6Q7L0X2 663 aa11.43□□□□□ -0.58
ZNF248-208ENST00000611278 AATKQ6ZMQ8 1374 aa11.43□□□□□ -0.58
ZNF248-208ENST00000611278 TTC21BQ7Z4L5 1316 aa11.43□□□□□ -0.58
ZNF248-208ENST00000611278 COL5A2P05997 1499 aaPredicted RBP11.42□□□□□ -0.58
ZNF248-208ENST00000611278 MORC1Q86VD1 984 aa11.42□□□□□ -0.58
ZNF248-208ENST00000611278 PUS7Q96PZ0 661 aaKnown RBP11.42□□□□□ -0.58
ZNF248-208ENST00000611278 CARD10Q9BWT7 1032 aa11.42□□□□□ -0.58
ZNF248-208ENST00000611278 EP400Q96L91 3159 aa11.42□□□□□ -0.58
ZNF248-208ENST00000611278 GRIN3BO60391 1043 aa11.42□□□□□ -0.58
ZNF248-208ENST00000611278 ANKRD24Q8TF21 1146 aa11.41□□□□□ -0.58
ZNF248-208ENST00000611278 PNNQ9H307 717 aaKnown RBP11.41□□□□□ -0.58
ZNF248-208ENST00000611278 SIN3AQ96ST3 1273 aa11.41□□□□□ -0.58
ZNF248-208ENST00000611278 PLEKHO1Q53GL0 409 aaPredicted RBP11.4□□□□□ -0.58
ZNF248-208ENST00000611278 SLC16A10Q8TF71 515 aa11.4□□□□□ -0.58
ZNF248-208ENST00000611278 CLSPNQ9HAW4 1339 aa11.4□□□□□ -0.58
ZNF248-208ENST00000611278 ZCRB1Q8TBF4 217 aaKnown RBP11.4□□□□□ -0.59
ZNF248-208ENST00000611278 PEAK1Q9H792 1746 aa11.39□□□□□ -0.59
ZNF248-208ENST00000611278 CASZ1Q86V15 1759 aa11.39□□□□□ -0.59
ZNF248-208ENST00000611278 WDR17Q8IZU2 1322 aa11.39□□□□□ -0.59
ZNF248-208ENST00000611278 USP47Q96K76 1375 aa11.39□□□□□ -0.59
ZNF248-208ENST00000611278 SLIT3O75094 1523 aa11.38□□□□□ -0.59
ZNF248-208ENST00000611278 NSD3Q9BZ95 1437 aa11.38□□□□□ -0.59
ZNF248-208ENST00000611278 ABCC6O95255 1503 aa11.38□□□□□ -0.59
ZNF248-208ENST00000611278 SBF2Q86WG5 1849 aa11.38□□□□□ -0.59
ZNF248-208ENST00000611278 MTFR1LQ9H019 292 aa11.37□□□□□ -0.59
ZNF248-208ENST00000611278 LRRC37A3O60309 1634 aa11.37□□□□□ -0.59
ZNF248-208ENST00000611278 TMOD3Q9NYL9 352 aa11.37□□□□□ -0.59
ZNF248-208ENST00000611278 NBPF1Q3BBV0 1214 aa11.37□□□□□ -0.59
ZNF248-208ENST00000611278 TTC5Q8N0Z6 440 aa11.37□□□□□ -0.59
ZNF248-208ENST00000611278 CNGB1Q14028 1251 aaPredicted RBP11.36□□□□□ -0.59
ZNF248-208ENST00000611278 AKAP12Q02952 1782 aa11.36□□□□□ -0.59
ZNF248-208ENST00000611278 RTF1Q92541 710 aaKnown RBP11.36□□□□□ -0.59
ZNF248-208ENST00000611278 MAP3K5Q99683 1374 aa11.36□□□□□ -0.59
ZNF248-208ENST00000611278 SLC27A3Q5K4L6 730 aa11.36□□□□□ -0.59
ZNF248-208ENST00000611278 ACSBG1Q96GR2 724 aa11.36□□□□□ -0.59
ZNF248-208ENST00000611278 CCNL1Q9UK58 526 aaPredicted RBP11.36□□□□□ -0.59
ZNF248-208ENST00000611278 WNK3Q9BYP7 1800 aa11.36□□□□□ -0.59
ZNF248-208ENST00000611278 USP6P35125 1406 aa11.36□□□□□ -0.59
ZNF248-208ENST00000611278 QRICH2Q9H0J4 1663 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms