RNA–Protein interactions for RNA: ENST00000609293.1

LINC01990-201, Transcript of long intergenic non-protein coding RNA 1990, humanhuman

TSL 1 (best) BASIC

Gene LINC01990, Length 1,487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01990-201ENST00000609293 CCDC141Q6ZP82 1450 aa12.18□□□□□ -0.46
LINC01990-201ENST00000609293 WASHC2CQ9Y4E1 1318 aa12.18□□□□□ -0.46
LINC01990-201ENST00000609293 NKX2-3Q8TAU0 364 aa12.17□□□□□ -0.46
LINC01990-201ENST00000609293 CFAP65Q6ZU64 1925 aaKnown RBP12.17□□□□□ -0.46
LINC01990-201ENST00000609293 ZC3H13Q5T200 1668 aaKnown RBP12.17□□□□□ -0.46
LINC01990-201ENST00000609293 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
LINC01990-201ENST00000609293 CEP162Q5TB80 1403 aa12.16□□□□□ -0.46
LINC01990-201ENST00000609293 CAMSAP2Q08AD1 1489 aa12.16□□□□□ -0.46
LINC01990-201ENST00000609293 LRRC7Q96NW7 1537 aa12.15□□□□□ -0.46
LINC01990-201ENST00000609293 NUTM2FA1L443 756 aa12.14□□□□□ -0.47
LINC01990-201ENST00000609293 KMT5BQ4FZB7 885 aa12.14□□□□□ -0.47
LINC01990-201ENST00000609293 TMEM134Q9H6X4 195 aa12.13□□□□□ -0.47
LINC01990-201ENST00000609293 ARHGEF5Q12774 1597 aa12.13□□□□□ -0.47
LINC01990-201ENST00000609293 CEP152O94986 1710 aa12.13□□□□□ -0.47
LINC01990-201ENST00000609293 UBR1Q8IWV7 1749 aa12.13□□□□□ -0.47
LINC01990-201ENST00000609293 XIRP1Q702N8 1843 aaKnown RBP12.12□□□□□ -0.47
LINC01990-201ENST00000609293 PDZRN3Q9UPQ7 1066 aa12.12□□□□□ -0.47
LINC01990-201ENST00000609293 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
LINC01990-201ENST00000609293 ABCC3O15438 1527 aa12.11□□□□□ -0.47
LINC01990-201ENST00000609293 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
LINC01990-201ENST00000609293 EIF2AK4Q9P2K8 1649 aaKnown RBP12.11□□□□□ -0.47
LINC01990-201ENST00000609293 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
LINC01990-201ENST00000609293 FCHSD2O94868 740 aa12.1□□□□□ -0.47
LINC01990-201ENST00000609293 ERVK-7P63135 1459 aa12.1□□□□□ -0.47
LINC01990-201ENST00000609293 BLOC1S3Q6QNY0 202 aa12.09□□□□□ -0.47
LINC01990-201ENST00000609293 RCCD1A6NED2 376 aa12.08□□□□□ -0.47
LINC01990-201ENST00000609293 SCAF11Q99590 1463 aaKnown RBP12.08□□□□□ -0.48
LINC01990-201ENST00000609293 MAST1Q9Y2H9 1570 aa12.08□□□□□ -0.48
LINC01990-201ENST00000609293 ACTN4O43707 911 aaKnown RBP12.08□□□□□ -0.48
LINC01990-201ENST00000609293 TSPY4P0CV99 314 aa12.08□□□□□ -0.48
LINC01990-201ENST00000609293 TSPY10P0CW01 314 aa12.08□□□□□ -0.48
LINC01990-201ENST00000609293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.07□□□□□ -0.48
LINC01990-201ENST00000609293 MROH1Q8NDA8 1641 aa12.06□□□□□ -0.48
LINC01990-201ENST00000609293 OATP04181 439 aa12.05□□□□□ -0.48
LINC01990-201ENST00000609293 CFHP08603 1231 aa12.04□□□□□ -0.48
LINC01990-201ENST00000609293 SLC19A1P41440 591 aa12.04□□□□□ -0.48
LINC01990-201ENST00000609293 RGS17Q9UGC6 210 aaPredicted RBP12.04□□□□□ -0.48
LINC01990-201ENST00000609293 SLIT1O75093 1534 aa12.04□□□□□ -0.48
LINC01990-201ENST00000609293 RNF223E7ERA6 249 aa12.03□□□□□ -0.48
LINC01990-201ENST00000609293 NR1I2O75469 434 aa12.03□□□□□ -0.48
LINC01990-201ENST00000609293 ARHGAP23Q9P227 1491 aa12.03□□□□□ -0.48
LINC01990-201ENST00000609293 ANKLE1Q8NAG6 615 aa12.02□□□□□ -0.48
LINC01990-201ENST00000609293 ROBO1Q9Y6N7 1651 aa12.02□□□□□ -0.49
LINC01990-201ENST00000609293 PIK3C2BO00750 1634 aa12.02□□□□□ -0.49
LINC01990-201ENST00000609293 TXNDC2Q86VQ3 553 aa12.02□□□□□ -0.49
LINC01990-201ENST00000609293 SETD1AO15047 1707 aaKnown RBP12.01□□□□□ -0.49
LINC01990-201ENST00000609293 LTKP29376 864 aa12.01□□□□□ -0.49
LINC01990-201ENST00000609293 SMYD5Q6GMV2 418 aa12.01□□□□□ -0.49
LINC01990-201ENST00000609293 EID1Q9Y6B2 187 aa12.01□□□□□ -0.49
LINC01990-201ENST00000609293 DUOX2Q9NRD8 1548 aa12□□□□□ -0.49
LINC01990-201ENST00000609293 FAM135BQ49AJ0 1406 aa12□□□□□ -0.49
LINC01990-201ENST00000609293 SEMA3EO15041 775 aa12□□□□□ -0.49
LINC01990-201ENST00000609293 FAM161AQ3B820 660 aa12□□□□□ -0.49
LINC01990-201ENST00000609293 PRDM15P57071 1507 aaPredicted RBP12□□□□□ -0.49
LINC01990-201ENST00000609293 KDM5AP29375 1690 aaKnown RBP12□□□□□ -0.49
LINC01990-201ENST00000609293 HIC1Q14526 733 aa11.99□□□□□ -0.49
LINC01990-201ENST00000609293 CROCC2H7BZ55 1655 aa11.99□□□□□ -0.49
LINC01990-201ENST00000609293 TLL1O43897 1013 aa11.98□□□□□ -0.49
LINC01990-201ENST00000609293 ADH1BP00325 375 aa11.98□□□□□ -0.49
LINC01990-201ENST00000609293 POTEAQ6S8J7 498 aa11.98□□□□□ -0.49
LINC01990-201ENST00000609293 PXYLP1Q8TE99 480 aa11.98□□□□□ -0.49
LINC01990-201ENST00000609293 LRRC9Q6ZRR7 1453 aa11.98□□□□□ -0.49
LINC01990-201ENST00000609293 PHLPP1O60346 1717 aa11.97□□□□□ -0.49
LINC01990-201ENST00000609293 ARHGAP31Q2M1Z3 1444 aa11.97□□□□□ -0.49
LINC01990-201ENST00000609293 MAP3K1Q13233 1512 aa11.97□□□□□ -0.49
LINC01990-201ENST00000609293 TMEM94Q12767 1356 aa11.97□□□□□ -0.49
LINC01990-201ENST00000609293 SLC10A3P09131 477 aa11.96□□□□□ -0.49
LINC01990-201ENST00000609293 ZNF598Q86UK7 904 aaKnown RBP11.96□□□□□ -0.49
LINC01990-201ENST00000609293 EFCAB6Q5THR3 1501 aa11.96□□□□□ -0.49
LINC01990-201ENST00000609293 TMEM2Q9UHN6 1383 aa11.96□□□□□ -0.5
LINC01990-201ENST00000609293 S1PR4O95977 384 aa11.95□□□□□ -0.5
LINC01990-201ENST00000609293 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
LINC01990-201ENST00000609293 ZNF787Q6DD87 383 aa11.95□□□□□ -0.5
LINC01990-201ENST00000609293 MYOM3Q5VTT5 1437 aa11.95□□□□□ -0.5
LINC01990-201ENST00000609293 ERBINQ96RT1 1412 aa11.95□□□□□ -0.5
LINC01990-201ENST00000609293 ZNF775Q96BV0 537 aaPredicted RBP11.95□□□□□ -0.5
LINC01990-201ENST00000609293 KIF15Q9NS87 1388 aa11.94□□□□□ -0.5
LINC01990-201ENST00000609293 NWD1Q149M9 1564 aa11.94□□□□□ -0.5
LINC01990-201ENST00000609293 SLC6A16Q9GZN6 736 aa11.94□□□□□ -0.5
LINC01990-201ENST00000609293 NKTRP30414 1462 aaKnown RBP11.93□□□□□ -0.5
LINC01990-201ENST00000609293 KCNA6P17658 529 aa11.93□□□□□ -0.5
LINC01990-201ENST00000609293 PRR20EP86478 221 aa11.93□□□□□ -0.5
LINC01990-201ENST00000609293 PRR20CP86479 221 aa11.93□□□□□ -0.5
LINC01990-201ENST00000609293 PRR20DP86480 221 aa11.93□□□□□ -0.5
LINC01990-201ENST00000609293 PRR20BP86481 221 aa11.93□□□□□ -0.5
LINC01990-201ENST00000609293 PRR20AP86496 221 aa11.93□□□□□ -0.5
LINC01990-201ENST00000609293 PKDCCQ504Y2 493 aa11.93□□□□□ -0.5
LINC01990-201ENST00000609293 PROSER2Q86WR7 435 aaPredicted RBP11.93□□□□□ -0.5
LINC01990-201ENST00000609293 KANK1Q14678 1352 aa11.93□□□□□ -0.5
LINC01990-201ENST00000609293 TET3O43151 1660 aa11.92□□□□□ -0.5
LINC01990-201ENST00000609293 DGAT1O75907 488 aa11.92□□□□□ -0.5
LINC01990-201ENST00000609293 METTL3Q86U44 580 aaKnown RBP11.92□□□□□ -0.5
LINC01990-201ENST00000609293 MYO5BQ9ULV0 1848 aa11.92□□□□□ -0.5
LINC01990-201ENST00000609293 MSH6P52701 1360 aa11.91□□□□□ -0.5
LINC01990-201ENST00000609293 VPS8Q8N3P4 1428 aa11.91□□□□□ -0.5
LINC01990-201ENST00000609293 ADGRB3O60242 1522 aa11.91□□□□□ -0.5
LINC01990-201ENST00000609293 CHD2O14647 1828 aaKnown RBP11.91□□□□□ -0.5
LINC01990-201ENST00000609293 TESPA1A2RU30 521 aaPredicted RBP11.9□□□□□ -0.5
LINC01990-201ENST00000609293 PPEF1O14829 653 aaPredicted RBP11.9□□□□□ -0.5
LINC01990-201ENST00000609293 ZNF697Q5TEC3 545 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms