RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	AKNA	Q7Z591	1439 aa		11.9	□□□□□ -0.5
PAX6-231	ENST00000606377	ARHGEF11	O15085	1522 aa		11.9	□□□□□ -0.5
PAX6-231	ENST00000606377	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.9	□□□□□ -0.5
PAX6-231	ENST00000606377	WAPL	Q7Z5K2	1190 aa		11.9	□□□□□ -0.5
PAX6-231	ENST00000606377	AACS	Q86V21	672 aa		11.9	□□□□□ -0.5
PAX6-231	ENST00000606377	OFD1	O75665	1012 aa		11.9	□□□□□ -0.5
PAX6-231	ENST00000606377	MIS18A	Q9NYP9	233 aa		11.9	□□□□□ -0.5
PAX6-231	ENST00000606377	NSD3	Q9BZ95	1437 aa		11.9	□□□□□ -0.5
PAX6-231	ENST00000606377	ZFYVE27	Q5T4F4	411 aa		11.9	□□□□□ -0.5
PAX6-231	ENST00000606377	PATL2	C9JE40	543 aa	Known RBP	11.9	□□□□□ -0.51
PAX6-231	ENST00000606377	ATF7IP	Q6VMQ6	1270 aa		11.89	□□□□□ -0.51
PAX6-231	ENST00000606377	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.89	□□□□□ -0.51
PAX6-231	ENST00000606377	ANKRD30B	Q9BXX2	1392 aa		11.89	□□□□□ -0.51
PAX6-231	ENST00000606377	NFKBIB	Q15653	356 aa		11.89	□□□□□ -0.51
PAX6-231	ENST00000606377	TTLL5	Q6EMB2	1281 aa		11.89	□□□□□ -0.51
PAX6-231	ENST00000606377	NACAP1	Q9BZK3	213 aa		11.89	□□□□□ -0.51
PAX6-231	ENST00000606377	PRX	Q9BXM0	1461 aa		11.89	□□□□□ -0.51
PAX6-231	ENST00000606377	CCDC69	A6NI79	296 aa		11.89	□□□□□ -0.51
PAX6-231	ENST00000606377	GNAT3	A8MTJ3	354 aa		11.89	□□□□□ -0.51
PAX6-231	ENST00000606377	CYP46A1	Q9Y6A2	500 aa		11.89	□□□□□ -0.51
PAX6-231	ENST00000606377	SRGAP3	O43295	1099 aa		11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	KIN	O60870	393 aa	Known RBP	11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	RABEP1	Q15276	862 aa		11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	CAVIN1	Q6NZI2	390 aa	Known RBP	11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	PRPF40A	O75400	957 aa	Known RBP	11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	KRT18	P05783	430 aa	Known RBP	11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	ZNF396	Q96N95	335 aa	Predicted RBP	11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	HMGXB3	Q12766	1538 aa		11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	TXLNA	P40222	546 aa		11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	MVP	Q14764	893 aa	Known RBP	11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	NUP133	Q8WUM0	1156 aa		11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	EPRS	P07814	1512 aa	Known RBP	11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	FMNL2	Q96PY5	1086 aa		11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	SMC2	O95347	1197 aa		11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	MCM2	P49736	904 aa		11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
PAX6-231	ENST00000606377	FIBP	O43427	364 aa		11.87	□□□□□ -0.51
PAX6-231	ENST00000606377	STK38	Q15208	465 aa		11.87	□□□□□ -0.51
PAX6-231	ENST00000606377	PDC	P20941	246 aa		11.87	□□□□□ -0.51
PAX6-231	ENST00000606377	FCHSD2	O94868	740 aa		11.87	□□□□□ -0.51
PAX6-231	ENST00000606377	BRPF1	P55201	1214 aa	Predicted RBP	11.87	□□□□□ -0.51
PAX6-231	ENST00000606377	MNS1	Q8NEH6	495 aa		11.87	□□□□□ -0.51
PAX6-231	ENST00000606377	RSPH6A	Q9H0K4	717 aa		11.87	□□□□□ -0.51
PAX6-231	ENST00000606377	NASP	P49321	788 aa	Predicted RBP	11.87	□□□□□ -0.51
PAX6-231	ENST00000606377	SET	Q01105	290 aa	Predicted RBP	11.87	□□□□□ -0.51
PAX6-231	ENST00000606377	ZSCAN25	Q6NSZ9	544 aa		11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	CT47B1	P0C2W7	299 aa	Predicted RBP	11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	HSP90AB2P	Q58FF8	381 aa		11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	CHD1L	Q86WJ1	897 aa		11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	LETM1	O95202	739 aa	Predicted RBP	11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	NFE2L2	Q16236	605 aa		11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	IQGAP2	Q13576	1575 aa		11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	IL1RAPL2	Q9NP60	686 aa		11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	MCM10	Q7L590	875 aa		11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	RUFY1	Q96T51	708 aa		11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	TRIM5	Q9C035	493 aa		11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	CCDC61	Q9Y6R9	512 aa		11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	USHBP1	Q8N6Y0	703 aa		11.86	□□□□□ -0.51
PAX6-231	ENST00000606377	CD109	Q6YHK3	1445 aa		11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	TRAK2	O60296	914 aa		11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	CWC27	Q6UX04	472 aa	Known RBP	11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	RAI14	Q9P0K7	980 aa		11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	KCNH5	Q8NCM2	988 aa		11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	TMPO	P42166	694 aa	Known RBP	11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	WWC2	Q6AWC2	1192 aa		11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	TRIM22	Q8IYM9	498 aa		11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	CAGE1	Q8TC20	777 aa		11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	CCDC141	Q6ZP82	1450 aa		11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	TDO2	P48775	406 aa		11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	ANKRD1	Q15327	319 aa		11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	FAM13B	Q9NYF5	915 aa		11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.85	□□□□□ -0.51
PAX6-231	ENST00000606377	PTCD1	O75127	700 aa	Known RBP	11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	STARD3NL	O95772	234 aa		11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	THUMPD2	Q9BTF0	503 aa	Known RBP	11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	TSPY26P	Q9H489	355 aa		11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	CEP126	Q9P2H0	1117 aa		11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	KIAA0586	Q9BVV6	1533 aa		11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	CCDC39	Q9UFE4	941 aa		11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	WDR97	A6NE52	1622 aa		11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	CAMSAP2	Q08AD1	1489 aa		11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	IGHMBP2	P38935	993 aa	Known RBP	11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	DCTN1	Q14203	1278 aa		11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	LRP2BP	Q9P2M1	347 aa		11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	KIF14	Q15058	1648 aa		11.84	□□□□□ -0.51
PAX6-231	ENST00000606377	FILIP1L	Q4L180	1135 aa		11.83	□□□□□ -0.51
PAX6-231	ENST00000606377	CCDC184	Q52MB2	194 aa		11.83	□□□□□ -0.51
PAX6-231	ENST00000606377	ZHX3	Q9H4I2	956 aa		11.83	□□□□□ -0.51
PAX6-231	ENST00000606377	PCF11	O94913	1555 aa	Known RBP	11.83	□□□□□ -0.51
PAX6-231	ENST00000606377	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.83	□□□□□ -0.52
PAX6-231	ENST00000606377	NUTM1	Q86Y26	1132 aa		11.83	□□□□□ -0.52
PAX6-231	ENST00000606377	TMOD3	Q9NYL9	352 aa		11.83	□□□□□ -0.52
PAX6-231	ENST00000606377	SOGA3	Q5TF21	947 aa		11.83	□□□□□ -0.52
PAX6-231	ENST00000606377	FAM43A	Q8N2R8	423 aa		11.83	□□□□□ -0.52
PAX6-231	ENST00000606377	DUSP27	Q5VZP5	1158 aa		11.83	□□□□□ -0.52
PAX6-231	ENST00000606377	AK7	Q96M32	723 aa		11.83	□□□□□ -0.52
PAX6-231	ENST00000606377	PIBF1	Q8WXW3	757 aa		11.82	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms