RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 ROBO2Q9HCK4 1378 aa16.41■□□□□ 0.22
SRGAP2-209ENST00000604247 TECPR2O15040 1411 aa16.4■□□□□ 0.22
SRGAP2-209ENST00000604247 UBR1Q8IWV7 1749 aa16.4■□□□□ 0.22
SRGAP2-209ENST00000604247 PRR36Q9H6K5 1346 aa16.4■□□□□ 0.22
SRGAP2-209ENST00000604247 RRS1Q15050 365 aaKnown RBP16.4■□□□□ 0.22
SRGAP2-209ENST00000604247 SPRYD3Q8NCJ5 442 aa16.4■□□□□ 0.22
SRGAP2-209ENST00000604247 NUDT16Q96DE0 195 aaKnown RBP16.4■□□□□ 0.22
SRGAP2-209ENST00000604247 C22orf23Q9BZE7 217 aa16.4■□□□□ 0.22
SRGAP2-209ENST00000604247 RTN4Q9NQC3 1192 aaKnown RBP16.4■□□□□ 0.22
SRGAP2-209ENST00000604247 BRPF3Q9ULD4 1205 aa16.4■□□□□ 0.22
SRGAP2-209ENST00000604247 LNPKQ9C0E8 428 aa16.39■□□□□ 0.21
SRGAP2-209ENST00000604247 EDC4Q6P2E9 1401 aaKnown RBP16.39■□□□□ 0.21
SRGAP2-209ENST00000604247 MRPL50Q8N5N7 158 aaKnown RBP16.38■□□□□ 0.21
SRGAP2-209ENST00000604247 MBIPQ9NS73 344 aa16.38■□□□□ 0.21
SRGAP2-209ENST00000604247 CPS1P31327 1500 aa16.38■□□□□ 0.21
SRGAP2-209ENST00000604247 ZBTB7BO15156 539 aaPredicted RBP16.38■□□□□ 0.21
SRGAP2-209ENST00000604247 BRPF1P55201 1214 aaPredicted RBP16.38■□□□□ 0.21
SRGAP2-209ENST00000604247 NUCB1Q02818 461 aa16.38■□□□□ 0.21
SRGAP2-209ENST00000604247 ZNF428Q96B54 188 aa16.37■□□□□ 0.21
SRGAP2-209ENST00000604247 C1orf115Q9H7X2 142 aa16.37■□□□□ 0.21
SRGAP2-209ENST00000604247 FAM83GA6ND36 823 aa16.37■□□□□ 0.21
SRGAP2-209ENST00000604247 GNAI1P63096 354 aa16.37■□□□□ 0.21
SRGAP2-209ENST00000604247 CCDC61Q9Y6R9 512 aa16.37■□□□□ 0.21
SRGAP2-209ENST00000604247 COG3Q96JB2 828 aa16.36■□□□□ 0.21
SRGAP2-209ENST00000604247 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
SRGAP2-209ENST00000604247 IFT57Q9NWB7 429 aa16.36■□□□□ 0.21
SRGAP2-209ENST00000604247 CALD1Q05682 793 aaKnown RBP16.35■□□□□ 0.21
SRGAP2-209ENST00000604247 DCTN1Q14203 1278 aa16.35■□□□□ 0.21
SRGAP2-209ENST00000604247 CHD1LQ86WJ1 897 aa16.35■□□□□ 0.21
SRGAP2-209ENST00000604247 C8orf58Q8NAV2 365 aa16.35■□□□□ 0.21
SRGAP2-209ENST00000604247 SIRT1Q96EB6 747 aa16.35■□□□□ 0.21
SRGAP2-209ENST00000604247 DLG5Q8TDM6 1919 aa16.35■□□□□ 0.21
SRGAP2-209ENST00000604247 SLC26A8Q96RN1 970 aa16.35■□□□□ 0.21
SRGAP2-209ENST00000604247 KNDC1Q76NI1 1749 aa16.34■□□□□ 0.21
SRGAP2-209ENST00000604247 TWISTNBQ3B726 338 aaPredicted RBP16.34■□□□□ 0.21
SRGAP2-209ENST00000604247 PLPPR3Q6T4P5 718 aa16.34■□□□□ 0.21
SRGAP2-209ENST00000604247 PTPRUQ92729 1446 aa16.34■□□□□ 0.21
SRGAP2-209ENST00000604247 CDK12Q9NYV4 1490 aaPredicted RBP16.34■□□□□ 0.21
SRGAP2-209ENST00000604247 AATKQ6ZMQ8 1374 aa16.34■□□□□ 0.21
SRGAP2-209ENST00000604247 ANKRD45Q5TZF3 282 aa16.34■□□□□ 0.21
SRGAP2-209ENST00000604247 ARHGAP45Q92619 1136 aa16.34■□□□□ 0.21
SRGAP2-209ENST00000604247 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
SRGAP2-209ENST00000604247 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.32■□□□□ 0.2
SRGAP2-209ENST00000604247 NUTM2FA1L443 756 aa16.32■□□□□ 0.2
SRGAP2-209ENST00000604247 HDGFP51858 240 aaKnown RBP16.32■□□□□ 0.2
SRGAP2-209ENST00000604247 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
SRGAP2-209ENST00000604247 PLEKHG1Q9ULL1 1385 aa16.32■□□□□ 0.2
SRGAP2-209ENST00000604247 PTCH1Q13635 1447 aa16.31■□□□□ 0.2
SRGAP2-209ENST00000604247 AEBP1Q8IUX7 1158 aa16.3■□□□□ 0.2
SRGAP2-209ENST00000604247 PIK3R4Q99570 1358 aa16.3■□□□□ 0.2
SRGAP2-209ENST00000604247 MON2Q7Z3U7 1717 aa16.3■□□□□ 0.2
SRGAP2-209ENST00000604247 ABCC4O15439 1325 aa16.29■□□□□ 0.2
SRGAP2-209ENST00000604247 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
SRGAP2-209ENST00000604247 GCC1Q96CN9 775 aa16.29■□□□□ 0.2
SRGAP2-209ENST00000604247 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
SRGAP2-209ENST00000604247 BMP2KLQ5H9B9 411 aa16.27■□□□□ 0.2
SRGAP2-209ENST00000604247 SULT6B1Q6IMI4 303 aa16.27■□□□□ 0.2
SRGAP2-209ENST00000604247 CHMP4BQ9H444 224 aaKnown RBP16.27■□□□□ 0.2
SRGAP2-209ENST00000604247 C3P01024 1663 aa16.27■□□□□ 0.2
SRGAP2-209ENST00000604247 EIF4A2Q14240 407 aaKnown RBP16.27■□□□□ 0.19
SRGAP2-209ENST00000604247 KRT24Q2M2I5 525 aa16.27■□□□□ 0.19
SRGAP2-209ENST00000604247 AKAP12Q02952 1782 aa16.27■□□□□ 0.19
SRGAP2-209ENST00000604247 RBM25P49756 843 aaKnown RBP16.26■□□□□ 0.19
SRGAP2-209ENST00000604247 ITSN1Q15811 1721 aa16.25■□□□□ 0.19
SRGAP2-209ENST00000604247 ACEP12821 1306 aa16.25■□□□□ 0.19
SRGAP2-209ENST00000604247 ARHGAP23Q9P227 1491 aa16.25■□□□□ 0.19
SRGAP2-209ENST00000604247 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
SRGAP2-209ENST00000604247 HSCBQ8IWL3 235 aa16.25■□□□□ 0.19
SRGAP2-209ENST00000604247 CHMP5Q9NZZ3 219 aa16.25■□□□□ 0.19
SRGAP2-209ENST00000604247 TTC21BQ7Z4L5 1316 aa16.24■□□□□ 0.19
SRGAP2-209ENST00000604247 MCM10Q7L590 875 aa16.24■□□□□ 0.19
SRGAP2-209ENST00000604247 AMOTL2Q9Y2J4 779 aa16.24■□□□□ 0.19
SRGAP2-209ENST00000604247 SOX12O15370 315 aa16.24■□□□□ 0.19
SRGAP2-209ENST00000604247 MCM4P33991 863 aa16.24■□□□□ 0.19
SRGAP2-209ENST00000604247 HSP90AB2PQ58FF8 381 aa16.24■□□□□ 0.19
SRGAP2-209ENST00000604247 SLIT1O75093 1534 aa16.24■□□□□ 0.19
SRGAP2-209ENST00000604247 PLEKHG3A1L390 1219 aa16.22■□□□□ 0.19
SRGAP2-209ENST00000604247 TBC1D9Q6ZT07 1266 aa16.22■□□□□ 0.19
SRGAP2-209ENST00000604247 TOPAZ1Q8N9V7 1692 aa16.22■□□□□ 0.19
SRGAP2-209ENST00000604247 NRKQ7Z2Y5 1582 aa16.22■□□□□ 0.19
SRGAP2-209ENST00000604247 KIF2CQ99661 725 aa16.22■□□□□ 0.19
SRGAP2-209ENST00000604247 EID1Q9Y6B2 187 aa16.21■□□□□ 0.19
SRGAP2-209ENST00000604247 CHL1O00533 1208 aa16.21■□□□□ 0.18
SRGAP2-209ENST00000604247 SNX21Q969T3 373 aa16.2■□□□□ 0.18
SRGAP2-209ENST00000604247 OVOS2A0A0J9YW53 1432 aa16.2■□□□□ 0.18
SRGAP2-209ENST00000604247 USP6P35125 1406 aa16.2■□□□□ 0.18
SRGAP2-209ENST00000604247 OVOS2Q6IE36 1432 aa16.2■□□□□ 0.18
SRGAP2-209ENST00000604247 SSH2Q76I76 1423 aa16.2■□□□□ 0.18
SRGAP2-209ENST00000604247 TBX22Q9Y458 520 aa16.2■□□□□ 0.18
SRGAP2-209ENST00000604247 INTS3Q68E01 1043 aaKnown RBP16.19■□□□□ 0.18
SRGAP2-209ENST00000604247 C16orf71Q8IYS4 520 aaPredicted RBP16.19■□□□□ 0.18
SRGAP2-209ENST00000604247 GZF1Q9H116 711 aaPredicted RBP16.19■□□□□ 0.18
SRGAP2-209ENST00000604247 DCTPP1Q9H773 170 aa16.19■□□□□ 0.18
SRGAP2-209ENST00000604247 MIS18AQ9NYP9 233 aa16.19■□□□□ 0.18
SRGAP2-209ENST00000604247 FER1L4A9Z1Z3 1794 aa16.18■□□□□ 0.18
SRGAP2-209ENST00000604247 CD2BP2O95400 341 aaKnown RBP16.18■□□□□ 0.18
SRGAP2-209ENST00000604247 GSPT1P15170 499 aaKnown RBP16.18■□□□□ 0.18
SRGAP2-209ENST00000604247 DDIT3P35638 169 aa16.18■□□□□ 0.18
SRGAP2-209ENST00000604247 PLEKHM2Q8IWE5 1019 aa16.18■□□□□ 0.18
SRGAP2-209ENST00000604247 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms