RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 GGT6Q6P531 493 aa18.92■□□□□ 0.62
LYSMD4-211ENST00000604213 TERF2IPQ9NYB0 399 aa18.91■□□□□ 0.62
LYSMD4-211ENST00000604213 LRRC7Q96NW7 1537 aa18.91■□□□□ 0.62
LYSMD4-211ENST00000604213 ABCC4O15439 1325 aa18.91■□□□□ 0.62
LYSMD4-211ENST00000604213 FRMPD1Q5SYB0 1578 aa18.9■□□□□ 0.62
LYSMD4-211ENST00000604213 CDC42BPGQ6DT37 1551 aa18.9■□□□□ 0.62
LYSMD4-211ENST00000604213 GSPT1P15170 499 aaKnown RBP18.9■□□□□ 0.62
LYSMD4-211ENST00000604213 ZNF445P59923 1031 aa18.9■□□□□ 0.62
LYSMD4-211ENST00000604213 KIAA1211Q6ZU35 1233 aa18.9■□□□□ 0.62
LYSMD4-211ENST00000604213 HECW2Q9P2P5 1572 aa18.9■□□□□ 0.62
LYSMD4-211ENST00000604213 OFD1O75665 1012 aa18.9■□□□□ 0.62
LYSMD4-211ENST00000604213 ATAD2Q6PL18 1390 aa18.9■□□□□ 0.62
LYSMD4-211ENST00000604213 FAM135BQ49AJ0 1406 aa18.9■□□□□ 0.62
LYSMD4-211ENST00000604213 PIK3C2BO00750 1634 aa18.9■□□□□ 0.62
LYSMD4-211ENST00000604213 ABCC3O15438 1527 aa18.89■□□□□ 0.61
LYSMD4-211ENST00000604213 PRKAR2BP31323 418 aa18.89■□□□□ 0.61
LYSMD4-211ENST00000604213 RABEP1Q15276 862 aa18.89■□□□□ 0.61
LYSMD4-211ENST00000604213 TSPYL6Q8N831 410 aa18.89■□□□□ 0.61
LYSMD4-211ENST00000604213 ANP32BQ92688 251 aaKnown RBP18.89■□□□□ 0.61
LYSMD4-211ENST00000604213 STK26Q9P289 416 aa18.89■□□□□ 0.61
LYSMD4-211ENST00000604213 CYP2E1P05181 493 aaPredicted RBP18.88■□□□□ 0.61
LYSMD4-211ENST00000604213 ZFYVE9O95405 1425 aa18.88■□□□□ 0.61
LYSMD4-211ENST00000604213 PLEKHM2Q8IWE5 1019 aa18.88■□□□□ 0.61
LYSMD4-211ENST00000604213 THUMPD2Q9BTF0 503 aaKnown RBP18.87■□□□□ 0.61
LYSMD4-211ENST00000604213 NUCB2P80303 420 aa18.86■□□□□ 0.61
LYSMD4-211ENST00000604213 NFE2L2Q16236 605 aa18.86■□□□□ 0.61
LYSMD4-211ENST00000604213 MCTP1Q6DN14 999 aa18.86■□□□□ 0.61
LYSMD4-211ENST00000604213 LMBRD1Q9NUN5 540 aa18.86■□□□□ 0.61
LYSMD4-211ENST00000604213 SIGLEC1Q9BZZ2 1709 aa18.86■□□□□ 0.61
LYSMD4-211ENST00000604213 ZSCAN23Q3MJ62 389 aa18.85■□□□□ 0.61
LYSMD4-211ENST00000604213 PHACTR3Q96KR7 559 aa18.85■□□□□ 0.61
LYSMD4-211ENST00000604213 PDCL3Q9H2J4 239 aa18.85■□□□□ 0.61
LYSMD4-211ENST00000604213 PTPRMP28827 1452 aa18.85■□□□□ 0.61
LYSMD4-211ENST00000604213 MINK1Q8N4C8 1332 aaPredicted RBP18.85■□□□□ 0.61
LYSMD4-211ENST00000604213 MSNP26038 577 aaKnown RBP18.84■□□□□ 0.61
LYSMD4-211ENST00000604213 HS1BP3Q53T59 392 aa18.84■□□□□ 0.61
LYSMD4-211ENST00000604213 CAVIN1Q6NZI2 390 aaKnown RBP18.84■□□□□ 0.61
LYSMD4-211ENST00000604213 USP26Q9BXU7 913 aa18.84■□□□□ 0.61
LYSMD4-211ENST00000604213 IFT57Q9NWB7 429 aa18.84■□□□□ 0.61
LYSMD4-211ENST00000604213 AK9Q5TCS8 1911 aa18.84■□□□□ 0.61
LYSMD4-211ENST00000604213 ZNF853P0CG23 659 aa18.84■□□□□ 0.61
LYSMD4-211ENST00000604213 GNAI1P63096 354 aa18.84■□□□□ 0.61
LYSMD4-211ENST00000604213 CALD1Q05682 793 aaKnown RBP18.84■□□□□ 0.61
LYSMD4-211ENST00000604213 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.84■□□□□ 0.61
LYSMD4-211ENST00000604213 ASXL2Q76L83 1435 aa18.83■□□□□ 0.61
LYSMD4-211ENST00000604213 TTC22Q5TAA0 569 aa18.83■□□□□ 0.61
LYSMD4-211ENST00000604213 HDGFL2Q7Z4V5 671 aaPredicted RBP18.83■□□□□ 0.61
LYSMD4-211ENST00000604213 CFAP44Q96MT7 982 aa18.83■□□□□ 0.61
LYSMD4-211ENST00000604213 MBIPQ9NS73 344 aa18.83■□□□□ 0.61
LYSMD4-211ENST00000604213 CLTCQ00610 1675 aaKnown RBP18.83■□□□□ 0.6
LYSMD4-211ENST00000604213 ELL2O00472 640 aaPredicted RBP18.83■□□□□ 0.6
LYSMD4-211ENST00000604213 TERF1P54274 439 aa18.83■□□□□ 0.6
LYSMD4-211ENST00000604213 PKP1Q13835 747 aa18.83■□□□□ 0.6
LYSMD4-211ENST00000604213 RBSNQ9H1K0 784 aa18.83■□□□□ 0.6
LYSMD4-211ENST00000604213 DCTPP1Q9H773 170 aa18.83■□□□□ 0.6
LYSMD4-211ENST00000604213 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
LYSMD4-211ENST00000604213 POLKQ9UBT6 870 aa18.82■□□□□ 0.6
LYSMD4-211ENST00000604213 NCLP19338 710 aaKnown RBP18.82■□□□□ 0.6
LYSMD4-211ENST00000604213 PDLIM2Q96JY6 352 aa18.82■□□□□ 0.6
LYSMD4-211ENST00000604213 PRAM1Q96QH2 718 aa18.82■□□□□ 0.6
LYSMD4-211ENST00000604213 API5Q9BZZ5 524 aaKnown RBP18.82■□□□□ 0.6
LYSMD4-211ENST00000604213 POGZQ7Z3K3 1410 aa18.81■□□□□ 0.6
LYSMD4-211ENST00000604213 TWISTNBQ3B726 338 aaPredicted RBP18.81■□□□□ 0.6
LYSMD4-211ENST00000604213 CWC22Q9HCG8 908 aaKnown RBP18.81■□□□□ 0.6
LYSMD4-211ENST00000604213 YEATS2Q9ULM3 1422 aa18.81■□□□□ 0.6
LYSMD4-211ENST00000604213 KNDC1Q76NI1 1749 aa18.8■□□□□ 0.6
LYSMD4-211ENST00000604213 KIF24Q5T7B8 1368 aa18.8■□□□□ 0.6
LYSMD4-211ENST00000604213 HMOX1P09601 288 aa18.8■□□□□ 0.6
LYSMD4-211ENST00000604213 FBLN1P23142 703 aa18.8■□□□□ 0.6
LYSMD4-211ENST00000604213 C16orf71Q8IYS4 520 aaPredicted RBP18.8■□□□□ 0.6
LYSMD4-211ENST00000604213 NOL7Q9UMY1 257 aaKnown RBP18.8■□□□□ 0.6
LYSMD4-211ENST00000604213 KIF20BQ96Q89 1820 aa18.8■□□□□ 0.6
LYSMD4-211ENST00000604213 C8orf58Q8NAV2 365 aa18.79■□□□□ 0.6
LYSMD4-211ENST00000604213 SENP3Q9H4L4 574 aaPredicted RBP18.79■□□□□ 0.6
LYSMD4-211ENST00000604213 IDI1Q13907 227 aa18.79■□□□□ 0.6
LYSMD4-211ENST00000604213 INTS3Q68E01 1043 aaKnown RBP18.79■□□□□ 0.6
LYSMD4-211ENST00000604213 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.79■□□□□ 0.6
LYSMD4-211ENST00000604213 CABP1Q9NZU7 370 aa18.79■□□□□ 0.6
LYSMD4-211ENST00000604213 ZNF500O60304 480 aaPredicted RBP18.78■□□□□ 0.6
LYSMD4-211ENST00000604213 PRIM1P49642 420 aaKnown RBP18.78■□□□□ 0.6
LYSMD4-211ENST00000604213 GPT2Q8TD30 523 aa18.78■□□□□ 0.6
LYSMD4-211ENST00000604213 YTHDC2Q9H6S0 1430 aaKnown RBP18.78■□□□□ 0.6
LYSMD4-211ENST00000604213 CDK19Q9BWU1 502 aa18.78■□□□□ 0.6
LYSMD4-211ENST00000604213 ZDHHC9Q9Y397 364 aa18.78■□□□□ 0.6
LYSMD4-211ENST00000604213 PRPF40AO75400 957 aaKnown RBP18.77■□□□□ 0.6
LYSMD4-211ENST00000604213 ZGPATQ8N5A5 531 aaKnown RBP18.77■□□□□ 0.6
LYSMD4-211ENST00000604213 OTUD7AQ8TE49 926 aaPredicted RBP18.77■□□□□ 0.6
LYSMD4-211ENST00000604213 RBM27Q9P2N5 1060 aaKnown RBP18.76■□□□□ 0.59
LYSMD4-211ENST00000604213 SDSP20132 328 aa18.76■□□□□ 0.59
LYSMD4-211ENST00000604213 ARHGEF40Q8TER5 1519 aa18.76■□□□□ 0.59
LYSMD4-211ENST00000604213 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.75■□□□□ 0.59
LYSMD4-211ENST00000604213 ANKRD44Q8N8A2 993 aa18.75■□□□□ 0.59
LYSMD4-211ENST00000604213 ST18O60284 1047 aa18.75■□□□□ 0.59
LYSMD4-211ENST00000604213 IL13P35225 146 aa18.75■□□□□ 0.59
LYSMD4-211ENST00000604213 ATP10DQ9P241 1426 aa18.74■□□□□ 0.59
LYSMD4-211ENST00000604213 R3HCC1Q9Y3T6 440 aaKnown RBP18.74■□□□□ 0.59
LYSMD4-211ENST00000604213 RBM10P98175 930 aaKnown RBP18.72■□□□□ 0.59
LYSMD4-211ENST00000604213 XPCQ01831 940 aaPredicted RBP18.72■□□□□ 0.59
LYSMD4-211ENST00000604213 LRSAM1Q6UWE0 723 aa18.72■□□□□ 0.59
LYSMD4-211ENST00000604213 TMEM63CQ9P1W3 806 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms