RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 COL3A1P02461 1466 aaPredicted RBP16.82■□□□□ 0.28
HERPUD2-207ENST00000603731 U2SURPO15042 1029 aaKnown RBP16.81■□□□□ 0.28
HERPUD2-207ENST00000603731 USP21Q9UK80 565 aa16.81■□□□□ 0.28
HERPUD2-207ENST00000603731 U2AF1L5P0DN76 240 aaPredicted RBP16.8■□□□□ 0.28
HERPUD2-207ENST00000603731 U2AF1Q01081 240 aaKnown RBP eCLIP16.8■□□□□ 0.28
HERPUD2-207ENST00000603731 DDX17Q92841 729 aaKnown RBP16.8■□□□□ 0.28
HERPUD2-207ENST00000603731 TRPC5Q9UL62 973 aaPredicted RBP16.8■□□□□ 0.28
HERPUD2-207ENST00000603731 ALS2Q96Q42 1657 aa16.8■□□□□ 0.28
HERPUD2-207ENST00000603731 ATRNO75882 1429 aa16.79■□□□□ 0.28
HERPUD2-207ENST00000603731 SBNO1A3KN83 1393 aa16.79■□□□□ 0.28
HERPUD2-207ENST00000603731 AMPHP49418 695 aa16.79■□□□□ 0.28
HERPUD2-207ENST00000603731 KCNH5Q8NCM2 988 aa16.79■□□□□ 0.28
HERPUD2-207ENST00000603731 LTN1O94822 1766 aa16.79■□□□□ 0.28
HERPUD2-207ENST00000603731 CCDC146Q8IYE0 955 aa16.78■□□□□ 0.28
HERPUD2-207ENST00000603731 PNNQ9H307 717 aaKnown RBP16.78■□□□□ 0.28
HERPUD2-207ENST00000603731 MAP3K19Q56UN5 1328 aa16.77■□□□□ 0.28
HERPUD2-207ENST00000603731 PEAK1Q9H792 1746 aa16.77■□□□□ 0.28
HERPUD2-207ENST00000603731 SALL2Q9Y467 1007 aaPredicted RBP16.77■□□□□ 0.28
HERPUD2-207ENST00000603731 PXDNQ92626 1479 aa16.76■□□□□ 0.27
HERPUD2-207ENST00000603731 SENP3-EIF4A1A0A087X0R7 540 aa16.76■□□□□ 0.27
HERPUD2-207ENST00000603731 DEFB132Q7Z7B7 95 aa16.76■□□□□ 0.27
HERPUD2-207ENST00000603731 RUNDC1Q96C34 613 aa16.76■□□□□ 0.27
HERPUD2-207ENST00000603731 TNS3Q68CZ2 1445 aa16.76■□□□□ 0.27
HERPUD2-207ENST00000603731 FLT4P35916 1363 aa16.76■□□□□ 0.27
HERPUD2-207ENST00000603731 PLEKHG5O94827 1062 aa16.75■□□□□ 0.27
HERPUD2-207ENST00000603731 KIF24Q5T7B8 1368 aa16.75■□□□□ 0.27
HERPUD2-207ENST00000603731 SLIT3O75094 1523 aa16.75■□□□□ 0.27
HERPUD2-207ENST00000603731 NEFMP07197 916 aa16.74■□□□□ 0.27
HERPUD2-207ENST00000603731 FNBP4Q8N3X1 1017 aaPredicted RBP16.74■□□□□ 0.27
HERPUD2-207ENST00000603731 ARHGEF10O15013 1369 aa16.74■□□□□ 0.27
HERPUD2-207ENST00000603731 SPATA31A3Q5VYP0 1347 aa16.73■□□□□ 0.27
HERPUD2-207ENST00000603731 IL13P35225 146 aa16.73■□□□□ 0.27
HERPUD2-207ENST00000603731 NFAT5O94916 1531 aa16.73■□□□□ 0.27
HERPUD2-207ENST00000603731 USP19O94966 1318 aa16.72■□□□□ 0.27
HERPUD2-207ENST00000603731 ZBTB7CA1YPR0 619 aa16.72■□□□□ 0.27
HERPUD2-207ENST00000603731 APAF1O14727 1248 aa16.72■□□□□ 0.27
HERPUD2-207ENST00000603731 GCP02774 474 aa16.72■□□□□ 0.27
HERPUD2-207ENST00000603731 NGEFQ8N5V2 710 aa16.72■□□□□ 0.27
HERPUD2-207ENST00000603731 RTL1A6NKG5 1358 aa16.72■□□□□ 0.27
HERPUD2-207ENST00000603731 SOS2Q07890 1332 aaPredicted RBP16.71■□□□□ 0.27
HERPUD2-207ENST00000603731 MAPK8IP3Q9UPT6 1336 aa16.71■□□□□ 0.27
HERPUD2-207ENST00000603731 PHRF1Q9P1Y6 1649 aaKnown RBP16.71■□□□□ 0.27
HERPUD2-207ENST00000603731 PSDA5PKW4 1024 aaPredicted RBP16.71■□□□□ 0.27
HERPUD2-207ENST00000603731 FCHSD2O94868 740 aa16.71■□□□□ 0.27
HERPUD2-207ENST00000603731 EIF4A2Q14240 407 aaKnown RBP16.71■□□□□ 0.27
HERPUD2-207ENST00000603731 HSP90AB2PQ58FF8 381 aa16.71■□□□□ 0.27
HERPUD2-207ENST00000603731 HOXC9P31274 260 aa16.7■□□□□ 0.26
HERPUD2-207ENST00000603731 PDE3BQ13370 1112 aa16.7■□□□□ 0.26
HERPUD2-207ENST00000603731 BCL9LQ86UU0 1499 aa16.69■□□□□ 0.26
HERPUD2-207ENST00000603731 HMOX1P09601 288 aa16.68■□□□□ 0.26
HERPUD2-207ENST00000603731 TCP11L2Q8N4U5 519 aa16.68■□□□□ 0.26
HERPUD2-207ENST00000603731 IP6K1Q92551 441 aa16.68■□□□□ 0.26
HERPUD2-207ENST00000603731 CRYBG1Q9Y4K1 1723 aa16.67■□□□□ 0.26
HERPUD2-207ENST00000603731 YY1P25490 414 aa16.67■□□□□ 0.26
HERPUD2-207ENST00000603731 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
HERPUD2-207ENST00000603731 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
HERPUD2-207ENST00000603731 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
HERPUD2-207ENST00000603731 RGPD1P0DJD0 1748 aa16.66■□□□□ 0.26
HERPUD2-207ENST00000603731 HAP1P54257 671 aaPredicted RBP16.66■□□□□ 0.26
HERPUD2-207ENST00000603731 NEUROD2Q15784 382 aa16.66■□□□□ 0.26
HERPUD2-207ENST00000603731 ARHGEF25Q86VW2 580 aa16.66■□□□□ 0.26
HERPUD2-207ENST00000603731 PLEKHF1Q96S99 279 aa16.66■□□□□ 0.26
HERPUD2-207ENST00000603731 RGPD5Q99666 1765 aa16.65■□□□□ 0.26
HERPUD2-207ENST00000603731 LTV1Q96GA3 475 aaPredicted RBP16.65■□□□□ 0.26
HERPUD2-207ENST00000603731 GJD4Q96KN9 370 aaPredicted RBP16.65■□□□□ 0.26
HERPUD2-207ENST00000603731 COL22A1Q8NFW1 1626 aaPredicted RBP16.65■□□□□ 0.26
HERPUD2-207ENST00000603731 ZC3H6P61129 1189 aaKnown RBP16.64■□□□□ 0.25
HERPUD2-207ENST00000603731 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
HERPUD2-207ENST00000603731 SULT6B1Q6IMI4 303 aa16.64■□□□□ 0.25
HERPUD2-207ENST00000603731 CABLES1Q8TDN4 633 aa16.64■□□□□ 0.25
HERPUD2-207ENST00000603731 RRP7AQ9Y3A4 280 aaKnown RBP16.64■□□□□ 0.25
HERPUD2-207ENST00000603731 GLI3P10071 1580 aa16.64■□□□□ 0.25
HERPUD2-207ENST00000603731 GOLGA2Q08379 1002 aa16.63■□□□□ 0.25
HERPUD2-207ENST00000603731 SF3B2Q13435 895 aaKnown RBP16.63■□□□□ 0.25
HERPUD2-207ENST00000603731 TMPOP42166 694 aaKnown RBP16.62■□□□□ 0.25
HERPUD2-207ENST00000603731 ABCA3Q99758 1704 aa16.62■□□□□ 0.25
HERPUD2-207ENST00000603731 CCDC27Q2M243 656 aa16.61■□□□□ 0.25
HERPUD2-207ENST00000603731 EYA1Q99502 592 aa16.61■□□□□ 0.25
HERPUD2-207ENST00000603731 IGSF1Q8N6C5 1336 aa16.61■□□□□ 0.25
HERPUD2-207ENST00000603731 RGPD2P0DJD1 1756 aa16.61■□□□□ 0.25
HERPUD2-207ENST00000603731 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.6■□□□□ 0.25
HERPUD2-207ENST00000603731 RIPK4P57078 832 aa16.6■□□□□ 0.25
HERPUD2-207ENST00000603731 AEBP1Q8IUX7 1158 aa16.6■□□□□ 0.25
HERPUD2-207ENST00000603731 WWC1Q8IX03 1113 aa16.6■□□□□ 0.25
HERPUD2-207ENST00000603731 ZNF521Q96K83 1311 aa16.6■□□□□ 0.25
HERPUD2-207ENST00000603731 DLG5Q8TDM6 1919 aa16.6■□□□□ 0.25
HERPUD2-207ENST00000603731 ABCC6O95255 1503 aa16.6■□□□□ 0.25
HERPUD2-207ENST00000603731 NFE2L2Q16236 605 aa16.59■□□□□ 0.25
HERPUD2-207ENST00000603731 IFFO2Q5TF58 517 aa16.59■□□□□ 0.25
HERPUD2-207ENST00000603731 CDCA7LQ96GN5 454 aa16.59■□□□□ 0.25
HERPUD2-207ENST00000603731 COL18A1P39060 1754 aa16.59■□□□□ 0.25
HERPUD2-207ENST00000603731 WDR63Q8IWG1 891 aa16.58■□□□□ 0.24
HERPUD2-207ENST00000603731 ANKRD24Q8TF21 1146 aa16.58■□□□□ 0.24
HERPUD2-207ENST00000603731 CPDO75976 1380 aa16.58■□□□□ 0.24
HERPUD2-207ENST00000603731 KIAA0232Q92628 1395 aa16.57■□□□□ 0.24
HERPUD2-207ENST00000603731 PHACTR3Q96KR7 559 aa16.57■□□□□ 0.24
HERPUD2-207ENST00000603731 FAM208AQ9UK61 1670 aaKnown RBP16.56■□□□□ 0.24
HERPUD2-207ENST00000603731 KDRP35968 1356 aa16.56■□□□□ 0.24
HERPUD2-207ENST00000603731 E9PSI1 815 aa16.56■□□□□ 0.24
HERPUD2-207ENST00000603731 SLFN5Q08AF3 891 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms